RNA–Protein interactions for RNA: ENST00000553673.1

FCF1-204, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-204ENST00000553673 ABCC13Q9NSE7 274 aa3.34□□□□□ -1.87
FCF1-204ENST00000553673 AIPL1Q9NZN9 384 aa3.34□□□□□ -1.87
FCF1-204ENST00000553673 RARRES3Q9UL19 164 aa3.34□□□□□ -1.87
FCF1-204ENST00000553673 MGAT4AQ9UM21 535 aa3.34□□□□□ -1.87
FCF1-204ENST00000553673 NDRG2Q9UN36 371 aaKnown RBP3.34□□□□□ -1.87
FCF1-204ENST00000553673 COL4A4P53420 1690 aaPredicted RBP3.33□□□□□ -1.88
FCF1-204ENST00000553673 CDH23Q9H251 3354 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 OR5H15A6NDH6 313 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 NEDD8-MDP1E9PL57 170 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 K7EQG2 157 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 TRDMT1O14717 391 aaKnown RBP3.33□□□□□ -1.88
FCF1-204ENST00000553673 TXNL1O43396 289 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 KIAA0513O60268 411 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 GALR3O60755 368 aaPredicted RBP3.33□□□□□ -1.88
FCF1-204ENST00000553673 EPOP01588 193 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 IGLV3-25P01717 112 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 IGHG1P01857 330 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 CALB1P05937 261 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 DCNP07585 359 aaKnown RBP3.33□□□□□ -1.88
FCF1-204ENST00000553673 TPM1P09493 284 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 SBK2P0C263 348 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 GATA2P23769 480 aaPredicted RBP3.33□□□□□ -1.88
FCF1-204ENST00000553673 CASP14P31944 242 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 STIP1P31948 543 aaKnown RBP3.33□□□□□ -1.88
FCF1-204ENST00000553673 MATKP42679 507 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 NSFP46459 744 aaKnown RBP3.33□□□□□ -1.88
FCF1-204ENST00000553673 SULT1E1P49888 294 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 KCNK10P57789 538 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 NME3Q13232 169 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 PON2Q15165 354 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 IFI44LQ53G44 452 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 SYPL2Q5VXT5 272 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 SPECC1LQ69YQ0 1117 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 NEPROQ6NW34 567 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 TPGS1Q6ZTW0 290 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 ZNF571Q7Z3V5 609 aaPredicted RBP3.33□□□□□ -1.88
FCF1-204ENST00000553673 RALGPS2Q86X27 583 aaPredicted RBP3.33□□□□□ -1.88
FCF1-204ENST00000553673 TMEM25Q86YD3 366 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 PHF13Q86YI8 300 aaPredicted RBP3.33□□□□□ -1.88
FCF1-204ENST00000553673 VSTM4Q8IW00 320 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 MCOLN2Q8IZK6 566 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 TMEM105Q8N8V8 129 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 CSNK1G2-AS1Q8NCQ2 148 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 LPCAT1Q8NF37 534 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 HAS2Q92819 552 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 PTP4A1Q93096 173 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 OTUB2Q96DC9 234 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 SERPINB11Q96P15 392 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 RCHY1Q96PM5 261 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 SPAG8Q99932 426 aaPredicted RBP3.33□□□□□ -1.88
FCF1-204ENST00000553673 P2RY13Q9BPV8 354 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 ANP32EQ9BTT0 268 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 NUSAP1Q9BXS6 441 aaKnown RBP3.33□□□□□ -1.88
FCF1-204ENST00000553673 ADNPQ9H2P0 1102 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 HAUS4Q9H6D7 363 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 PNPLA3Q9NST1 481 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 ZNHIT6Q9NWK9 470 aaKnown RBP3.33□□□□□ -1.88
FCF1-204ENST00000553673 DDIT4Q9NX09 232 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.33□□□□□ -1.88
FCF1-204ENST00000553673 ADAM22Q9P0K1 906 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 XPO7Q9UIA9 1087 aaKnown RBP3.33□□□□□ -1.88
FCF1-204ENST00000553673 PSORS1C1Q9UIG5 152 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 FBXW2Q9UKT8 454 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.33□□□□□ -1.88
FCF1-204ENST00000553673 STAP1Q9ULZ2 295 aa3.33□□□□□ -1.88
FCF1-204ENST00000553673 MTF2Q9Y483 593 aaPredicted RBP3.33□□□□□ -1.88
FCF1-204ENST00000553673 BZW2Q9Y6E2 419 aaKnown RBP3.33□□□□□ -1.88
FCF1-204ENST00000553673 PTPRSQ13332 1948 aa3.32□□□□□ -1.88
FCF1-204ENST00000553673 SYNJ2BP-COX16A0A087WUM0 186 aa3.32□□□□□ -1.88
FCF1-204ENST00000553673 A0A0A6YYC8 382 aaPredicted RBP3.32□□□□□ -1.88
FCF1-204ENST00000553673 TRBV5-4A0A0C4DH59 114 aa3.32□□□□□ -1.88
FCF1-204ENST00000553673 GOLGA6L7A0A1B0GV03 622 aa3.32□□□□□ -1.88
FCF1-204ENST00000553673 SRRM4A7MD48 611 aaKnown RBP3.32□□□□□ -1.88
FCF1-204ENST00000553673 SHISA9B4DS77 424 aa3.32□□□□□ -1.88
FCF1-204ENST00000553673 I3L1I5 382 aaPredicted RBP3.32□□□□□ -1.88
FCF1-204ENST00000553673 CACNG3O60359 315 aa3.32□□□□□ -1.88
FCF1-204ENST00000553673 RTN2O75298 545 aa3.32□□□□□ -1.88
FCF1-204ENST00000553673 OR6A2O95222 327 aa3.32□□□□□ -1.88
FCF1-204ENST00000553673 IGLV3-27P01718 113 aa3.32□□□□□ -1.88
FCF1-204ENST00000553673 APOEP02649 317 aa3.32□□□□□ -1.88
FCF1-204ENST00000553673 APODP05090 189 aa3.32□□□□□ -1.88
FCF1-204ENST00000553673 PLEKP08567 350 aaPredicted RBP3.32□□□□□ -1.88
FCF1-204ENST00000553673 CT45A8P0DMV1 189 aa3.32□□□□□ -1.88
FCF1-204ENST00000553673 CT45A9P0DMV2 189 aa3.32□□□□□ -1.88
FCF1-204ENST00000553673 SLC2A3P11169 496 aa3.32□□□□□ -1.88
FCF1-204ENST00000553673 EZRP15311 586 aaKnown RBP3.32□□□□□ -1.88
FCF1-204ENST00000553673 GLRA1P23415 457 aa3.32□□□□□ -1.88
FCF1-204ENST00000553673 HNRNPH3P31942 346 aaKnown RBP3.32□□□□□ -1.88
FCF1-204ENST00000553673 CCR1P32246 355 aa3.32□□□□□ -1.88
FCF1-204ENST00000553673 RDXP35241 583 aaKnown RBP3.32□□□□□ -1.88
FCF1-204ENST00000553673 SPRP35270 261 aaPredicted RBP3.32□□□□□ -1.88
FCF1-204ENST00000553673 OPRD1P41143 372 aa3.32□□□□□ -1.88
FCF1-204ENST00000553673 MAGEA9P43362 315 aa3.32□□□□□ -1.88
FCF1-204ENST00000553673 RPS9P46781 194 aaKnown RBP3.32□□□□□ -1.88
FCF1-204ENST00000553673 KIAA1024LP59773 190 aa3.32□□□□□ -1.88
FCF1-204ENST00000553673 KRTAP10-8P60410 259 aa3.32□□□□□ -1.88
FCF1-204ENST00000553673 RPS27AP62979 156 aaKnown RBP3.32□□□□□ -1.88
FCF1-204ENST00000553673 KDSRQ06136 332 aa3.32□□□□□ -1.88
FCF1-204ENST00000553673 HSPA14Q0VDF9 509 aa3.32□□□□□ -1.88
FCF1-204ENST00000553673 COX10Q12887 443 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms