RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 SDC3O75056 442 aa4.39□□□□□ -1.71
PCNX1-205ENST00000553508 PRB2P02812 416 aaPredicted RBP4.39□□□□□ -1.71
PCNX1-205ENST00000553508 TOP1P11387 765 aaKnown RBP4.39□□□□□ -1.71
PCNX1-205ENST00000553508 AREGP15514 252 aa4.39□□□□□ -1.71
PCNX1-205ENST00000553508 MX1P20591 662 aa4.39□□□□□ -1.71
PCNX1-205ENST00000553508 PSMB1P20618 241 aaKnown RBP4.39□□□□□ -1.71
PCNX1-205ENST00000553508 ZNF133P52736 654 aaPredicted RBP4.39□□□□□ -1.71
PCNX1-205ENST00000553508 DIO3P55073 304 aa4.39□□□□□ -1.71
PCNX1-205ENST00000553508 CNTN2Q02246 1040 aa4.39□□□□□ -1.71
PCNX1-205ENST00000553508 DMKNQ6E0U4 476 aaPredicted RBP4.39□□□□□ -1.71
PCNX1-205ENST00000553508 IYDQ6PHW0 289 aa4.39□□□□□ -1.71
PCNX1-205ENST00000553508 IGFL2Q6UWQ7 119 aa4.39□□□□□ -1.71
PCNX1-205ENST00000553508 KRT77Q7Z794 578 aa4.39□□□□□ -1.71
PCNX1-205ENST00000553508 TGIF2LYQ8IUE0 185 aa4.39□□□□□ -1.71
PCNX1-205ENST00000553508 CADM2Q8N3J6 435 aa4.39□□□□□ -1.71
PCNX1-205ENST00000553508 MLKLQ8NB16 471 aa4.39□□□□□ -1.71
PCNX1-205ENST00000553508 SLC25A38Q96DW6 304 aa4.39□□□□□ -1.71
PCNX1-205ENST00000553508 MTG1Q9BT17 334 aaPredicted RBP4.39□□□□□ -1.71
PCNX1-205ENST00000553508 OPN3Q9H1Y3 402 aaPredicted RBP4.39□□□□□ -1.71
PCNX1-205ENST00000553508 FLVCR1Q9Y5Y0 555 aa4.39□□□□□ -1.71
PCNX1-205ENST00000553508 WDR19Q8NEZ3 1342 aa4.39□□□□□ -1.71
PCNX1-205ENST00000553508 UNC80Q8N2C7 3258 aa4.38□□□□□ -1.71
PCNX1-205ENST00000553508 MCM3APO60318 1980 aa4.38□□□□□ -1.71
PCNX1-205ENST00000553508 LRRC37A2A6NM11 1700 aa4.38□□□□□ -1.71
PCNX1-205ENST00000553508 SERF1AO75920 110 aa4.38□□□□□ -1.71
PCNX1-205ENST00000553508 APRTP07741 180 aa4.38□□□□□ -1.71
PCNX1-205ENST00000553508 IGHV1-2P23083 117 aa4.38□□□□□ -1.71
PCNX1-205ENST00000553508 CCL23P55773 120 aa4.38□□□□□ -1.71
PCNX1-205ENST00000553508 NOP14P78316 857 aaKnown RBP4.38□□□□□ -1.71
PCNX1-205ENST00000553508 CCZ1BP86790 482 aa4.38□□□□□ -1.71
PCNX1-205ENST00000553508 CCZ1P86791 482 aaPredicted RBP4.38□□□□□ -1.71
PCNX1-205ENST00000553508 IL18R1Q13478 541 aa4.38□□□□□ -1.71
PCNX1-205ENST00000553508 BTG3Q14201 252 aaPredicted RBP4.38□□□□□ -1.71
PCNX1-205ENST00000553508 DCAF4L1Q3SXM0 396 aa4.38□□□□□ -1.71
PCNX1-205ENST00000553508 PRAMEF7Q5VXH5 474 aa4.38□□□□□ -1.71
PCNX1-205ENST00000553508 PHOSPHO2Q8TCD6 241 aa4.38□□□□□ -1.71
PCNX1-205ENST00000553508 ESR2Q92731 530 aa4.38□□□□□ -1.71
PCNX1-205ENST00000553508 TRPV6Q9H1D0 765 aa4.38□□□□□ -1.71
PCNX1-205ENST00000553508 ALDH8A1Q9H2A2 487 aaPredicted RBP4.38□□□□□ -1.71
PCNX1-205ENST00000553508 ZNF702PQ9H963 129 aa4.38□□□□□ -1.71
PCNX1-205ENST00000553508 RPH3AQ9Y2J0 694 aaPredicted RBP4.38□□□□□ -1.71
PCNX1-205ENST00000553508 ZMYM6O95789 1325 aa4.38□□□□□ -1.71
PCNX1-205ENST00000553508 LAMA2P24043 3122 aaKnown RBP4.38□□□□□ -1.71
PCNX1-205ENST00000553508 BRWD1Q9NSI6 2320 aa4.37□□□□□ -1.71
PCNX1-205ENST00000553508 CTAGE5O15320 804 aa4.37□□□□□ -1.71
PCNX1-205ENST00000553508 FMO6PO60774 539 aa4.37□□□□□ -1.71
PCNX1-205ENST00000553508 IGSF6O95976 241 aa4.37□□□□□ -1.71
PCNX1-205ENST00000553508 ZNF18P17022 549 aa4.37□□□□□ -1.71
PCNX1-205ENST00000553508 PTBP1P26599 531 aaKnown RBP eCLIP4.37□□□□□ -1.712e-6■■■□□ 17.3
PCNX1-205ENST00000553508 RPA1P27694 616 aa4.37□□□□□ -1.71
PCNX1-205ENST00000553508 PUDPQ08623 228 aa4.37□□□□□ -1.71
PCNX1-205ENST00000553508 C17orf67Q0P5P2 114 aa4.37□□□□□ -1.71
PCNX1-205ENST00000553508 EIF2B1Q14232 305 aaKnown RBP4.37□□□□□ -1.71
PCNX1-205ENST00000553508 ALX1Q15699 326 aa4.37□□□□□ -1.71
PCNX1-205ENST00000553508 DEFB128Q7Z7B8 93 aa4.37□□□□□ -1.71
PCNX1-205ENST00000553508 ADGRD2Q7Z7M1 963 aa4.37□□□□□ -1.71
PCNX1-205ENST00000553508 IQCA1Q86XH1 822 aa4.37□□□□□ -1.71
PCNX1-205ENST00000553508 SFRP1Q8N474 314 aa4.37□□□□□ -1.71
PCNX1-205ENST00000553508 SETD7Q8WTS6 366 aaKnown RBP4.37□□□□□ -1.71
PCNX1-205ENST00000553508 PTP4A1Q93096 173 aa4.37□□□□□ -1.71
PCNX1-205ENST00000553508 IMMP1LQ96LU5 166 aa4.37□□□□□ -1.71
PCNX1-205ENST00000553508 KRTAP4-3Q9BYR4 195 aa4.37□□□□□ -1.71
PCNX1-205ENST00000553508 HPS4Q9NQG7 708 aa4.37□□□□□ -1.71
PCNX1-205ENST00000553508 ASTN1O14525 1302 aa4.37□□□□□ -1.71
PCNX1-205ENST00000553508 ABCB11O95342 1321 aa4.37□□□□□ -1.71
PCNX1-205ENST00000553508 PRRC2BQ5JSZ5 2229 aaKnown RBP4.36□□□□□ -1.71
PCNX1-205ENST00000553508 PDLIM1O00151 329 aa4.36□□□□□ -1.71
PCNX1-205ENST00000553508 HIP1O00291 1037 aa4.36□□□□□ -1.71
PCNX1-205ENST00000553508 NMT2O60551 498 aa4.36□□□□□ -1.71
PCNX1-205ENST00000553508 SYNGR4O95473 234 aa4.36□□□□□ -1.71
PCNX1-205ENST00000553508 CA3P07451 260 aa4.36□□□□□ -1.71
PCNX1-205ENST00000553508 SGSHP51688 502 aa4.36□□□□□ -1.71
PCNX1-205ENST00000553508 WNT4P56705 351 aa4.36□□□□□ -1.71
PCNX1-205ENST00000553508 RPS6P62753 249 aaKnown RBP4.36□□□□□ -1.71
PCNX1-205ENST00000553508 KYAT1Q16773 422 aa4.36□□□□□ -1.71
PCNX1-205ENST00000553508 USH1GQ495M9 461 aa4.36□□□□□ -1.71
PCNX1-205ENST00000553508 CELF3Q5SZQ8 465 aaKnown RBP4.36□□□□□ -1.71
PCNX1-205ENST00000553508 LGSNQ5TDP6 509 aa4.36□□□□□ -1.71
PCNX1-205ENST00000553508 DPY19L2P2Q6ZN68 376 aa4.36□□□□□ -1.71
PCNX1-205ENST00000553508 MOB1BQ7L9L4 216 aa4.36□□□□□ -1.71
PCNX1-205ENST00000553508 ARNTL2Q8WYA1 636 aa4.36□□□□□ -1.71
PCNX1-205ENST00000553508 DLX4Q92988 240 aaPredicted RBP4.36□□□□□ -1.71
PCNX1-205ENST00000553508 TMEM45BQ96B21 275 aa4.36□□□□□ -1.71
PCNX1-205ENST00000553508 C11orf24Q96F05 449 aaPredicted RBP4.36□□□□□ -1.71
PCNX1-205ENST00000553508 DHTKD1Q96HY7 919 aaPredicted RBP4.36□□□□□ -1.71
PCNX1-205ENST00000553508 C19orf24Q9BVV8 132 aa4.36□□□□□ -1.71
PCNX1-205ENST00000553508 TM2D1Q9BX74 207 aa4.36□□□□□ -1.71
PCNX1-205ENST00000553508 KCNMB3Q9NPA1 279 aa4.36□□□□□ -1.71
PCNX1-205ENST00000553508 MIOXQ9UGB7 285 aa4.36□□□□□ -1.71
PCNX1-205ENST00000553508 CTNNA3Q9UI47 895 aa4.36□□□□□ -1.71
PCNX1-205ENST00000553508 CCDC171Q6TFL3 1326 aa4.36□□□□□ -1.71
PCNX1-205ENST00000553508 TANC1Q9C0D5 1861 aa4.35□□□□□ -1.71
PCNX1-205ENST00000553508 LRIT2A6NDA9 550 aa4.35□□□□□ -1.71
PCNX1-205ENST00000553508 TLR4O00206 839 aa4.35□□□□□ -1.71
PCNX1-205ENST00000553508 PROS1P07225 676 aa4.35□□□□□ -1.71
PCNX1-205ENST00000553508 IQCF3P0C7M6 154 aa4.35□□□□□ -1.71
PCNX1-205ENST00000553508 HSPD1P10809 573 aaKnown RBP4.35□□□□□ -1.71
PCNX1-205ENST00000553508 PDHBP11177 359 aa4.35□□□□□ -1.71
PCNX1-205ENST00000553508 CNN1P51911 297 aaKnown RBP4.35□□□□□ -1.71
PCNX1-205ENST00000553508 SNAP25P60880 206 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms