RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 SLC19A3Q9BZV2 496 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 QRSL1Q9H0R6 528 aaKnown RBP6.75□□□□□ -1.33
ATXN3-221ENST00000553498 FN3KQ9H479 309 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 C12orf10Q9HB07 376 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 EXOSC3Q9NQT5 275 aaKnown RBP6.75□□□□□ -1.33
ATXN3-221ENST00000553498 UBQLN4Q9NRR5 601 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 FGF21Q9NSA1 209 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 SELENONQ9NZV5 590 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 CBLCQ9ULV8 474 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.75□□□□□ -1.33
ATXN3-221ENST00000553498 MED31Q9Y3C7 131 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 OR10H1Q9Y4A9 318 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 CLCA3PQ9Y6N3 262 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 CDH10Q9Y6N8 788 aa6.75□□□□□ -1.33
ATXN3-221ENST00000553498 IGLV3-12A0A075B6K2 115 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 A0A0B4J2E0 115 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 A0A1B0GX12 115 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 SERINC4A6NH21 518 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 EIF1AYO14602 144 aaKnown RBP6.74□□□□□ -1.33
ATXN3-221ENST00000553498 PRODHO43272 600 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 PPM1BO75688 479 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 INMTO95050 263 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 IL33O95760 270 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 FADS2O95864 444 aaKnown RBP6.74□□□□□ -1.33
ATXN3-221ENST00000553498 BCL10O95999 233 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 IGKV3-11P04433 115 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 CTSBP07858 339 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 CT45A8P0DMV1 189 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 CT45A9P0DMV2 189 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 PNMTP11086 282 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 BMP7P18075 431 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 PSMB9P28065 219 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 CSF2RBP32927 897 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 GRK5P34947 590 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 SLC6A8P48029 635 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 SERPINB10P48595 397 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 SLC37A1P57057 533 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 COPZ1P61923 177 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 MAT1AQ00266 395 aaKnown RBP6.74□□□□□ -1.33
ATXN3-221ENST00000553498 BNC1Q01954 994 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 CFHR1Q03591 330 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 NFATC3Q12968 1075 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 C1DQ13901 141 aaKnown RBP6.74□□□□□ -1.33
ATXN3-221ENST00000553498 SNAPC1Q16533 368 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 MAPK14Q16539 360 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 SMN1Q16637 294 aaKnown RBP6.74□□□□□ -1.33
ATXN3-221ENST00000553498 HLA-BQ31612 363 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 AMZ1Q400G9 498 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 ANKDD1AQ495B1 522 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 CT45A2Q5DJT8 189 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 CCNJQ5T5M9 372 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 ZNF620Q6ZNG0 422 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 GDPGP1Q6ZNW5 385 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 Q6ZPB1 254 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-221ENST00000553498 DGAT2L6Q6ZPD8 337 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 BMP8AQ7Z5Y6 402 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 TMEM151BQ8IW70 566 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 NRMQ8IXM6 262 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 RCBTB1Q8NDN9 531 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 PROKR2Q8NFJ6 384 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 OR52L1Q8NGH7 329 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 C16orf52Q8NHV5 167 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 PTPMT1Q8WUK0 201 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-221ENST00000553498 SENP5Q96HI0 755 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-221ENST00000553498 PLEKHA8Q96JA3 519 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 LCORQ96JN0 433 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-221ENST00000553498 PRSS27Q9BQR3 290 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 ZNF426Q9BUY5 554 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 CNPPD1Q9BV87 410 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 MND1Q9BWT6 205 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 JAM3Q9BX67 310 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 NRSN2Q9GZP1 204 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 SIAEQ9HAT2 523 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 ISYNA1Q9NPH2 558 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 CHCHD3Q9NX63 227 aaKnown RBP6.74□□□□□ -1.33
ATXN3-221ENST00000553498 COPS7AQ9UBW8 275 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 SLC7A7Q9UM01 511 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 DIMT1Q9UNQ2 313 aaKnown RBP6.74□□□□□ -1.33
ATXN3-221ENST00000553498 ERVK-19Q9WJR5 959 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 ERGIC3Q9Y282 383 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 SPTBN5Q9NRC6 3674 aaKnown RBP6.74□□□□□ -1.33
ATXN3-221ENST00000553498 UNC80Q8N2C7 3258 aa6.74□□□□□ -1.33
ATXN3-221ENST00000553498 F5P12259 2224 aa6.73□□□□□ -1.33
ATXN3-221ENST00000553498 PCM1Q15154 2024 aa6.73□□□□□ -1.33
ATXN3-221ENST00000553498 A0A096LPE4 126 aa6.73□□□□□ -1.33
ATXN3-221ENST00000553498 A0A1W2PPZ6 126 aa6.73□□□□□ -1.33
ATXN3-221ENST00000553498 A0A1W2PQD3 144 aa6.73□□□□□ -1.33
ATXN3-221ENST00000553498 GXYLT2A0PJZ3 443 aa6.73□□□□□ -1.33
ATXN3-221ENST00000553498 FAM86C2PA6NEL3 165 aa6.73□□□□□ -1.33
ATXN3-221ENST00000553498 UNC119BA6NIH7 251 aa6.73□□□□□ -1.33
ATXN3-221ENST00000553498 KDM4EB2RXH2 506 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-221ENST00000553498 PEX12O00623 359 aa6.73□□□□□ -1.33
ATXN3-221ENST00000553498 TLX2O43763 284 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-221ENST00000553498 HCN1O60741 890 aa6.73□□□□□ -1.33
ATXN3-221ENST00000553498 ENTPD6O75354 484 aa6.73□□□□□ -1.33
ATXN3-221ENST00000553498 BCAS1O75363 584 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-221ENST00000553498 ATE1O95260 518 aa6.73□□□□□ -1.33
ATXN3-221ENST00000553498 LYPD3O95274 346 aa6.73□□□□□ -1.33
ATXN3-221ENST00000553498 SOX14O95416 240 aa6.73□□□□□ -1.33
ATXN3-221ENST00000553498 ZNF883P0CG24 379 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms