RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 MEX3DQ86XN8 651 aaKnown RBP11.96□□□□□ -0.49
SHMT2-205ENST00000553474 VWA5B2Q8N398 1253 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 LSMEM1Q8N8F7 131 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 ATP6V1C2Q8NEY4 427 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 RPLP0P6Q8NHW5 317 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 OIT3Q8WWZ8 545 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 TP53INP1Q96A56 240 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 KCTD12Q96CX2 325 aaKnown RBP11.96□□□□□ -0.49
SHMT2-205ENST00000553474 BPIFA2Q96DR5 249 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 ZNF578Q96N58 590 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-205ENST00000553474 CTRCQ99895 268 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 SOSTQ9BQB4 213 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 CCDC3Q9BQI4 270 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 LMF2Q9BU23 707 aaKnown RBP11.96□□□□□ -0.49
SHMT2-205ENST00000553474 TRIM2Q9C040 744 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 BABAM2Q9NXR7 383 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 MMP17Q9ULZ9 603 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 CA5BQ9Y2D0 317 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 NTNG1Q9Y2I2 539 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 PCDHGB7Q9Y5F8 929 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 CSNK1G3Q9Y6M4 447 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 TRBV23OR9-2A0A075B6M9 112 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 RIIAD1A6NNX1 92 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 PRR23D1E9PI22 279 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-205ENST00000553474 LDB3O75112 727 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 RGS9O75916 674 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-205ENST00000553474 APOL3O95236 402 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 CSF3P09919 207 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 PRR23D2P0DMB1 279 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-205ENST00000553474 BLKP51451 505 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 PSMD4P55036 377 aaKnown RBP11.95□□□□□ -0.5
SHMT2-205ENST00000553474 STARD6P59095 220 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 SHC2P98077 582 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 SLC35F1Q5T1Q4 408 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 CCNJQ5T5M9 372 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 RTL4Q6ZR62 310 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 DGLUCYQ7Z3D6 616 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 CMIPQ8IY22 773 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 SPRYD4Q8WW59 207 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-205ENST00000553474 EDAQ92838 391 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 ANKRD9Q96BM1 317 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-205ENST00000553474 OTULINQ96BN8 352 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 ZC3HAV1LQ96H79 300 aaKnown RBP11.95□□□□□ -0.5
SHMT2-205ENST00000553474 AHCYL2Q96HN2 611 aaKnown RBP11.95□□□□□ -0.5
SHMT2-205ENST00000553474 DEPDC7Q96QD5 511 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 SLX1AQ9BQ83 275 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 ZNF426Q9BUY5 554 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 DPH1Q9BZG8 443 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 HOXD1Q9GZZ0 328 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 SEMA6CQ9H3T2 930 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 USP36Q9P275 1121 aaKnown RBP11.95□□□□□ -0.5
SHMT2-205ENST00000553474 SIGLEC7Q9Y286 467 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 MRPS33Q9Y291 106 aaKnown RBP11.95□□□□□ -0.5
SHMT2-205ENST00000553474 YARS2Q9Y2Z4 477 aaKnown RBP11.95□□□□□ -0.5
SHMT2-205ENST00000553474 A0A0B4J2E0 115 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 CENPVL1A0A0U1RR11 272 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 A0A1B0GX12 115 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 OR5K3A6NET4 321 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 C12orf71A8MTZ7 269 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 SRPX2O60687 465 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-205ENST00000553474 LALBAP00709 142 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 CLEC2LP0C7M8 214 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 MAKP20794 623 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 GABRA3P34903 492 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 RFX2P48378 723 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 FXYD6P3P58550 94 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 SNRPNP63162 240 aaKnown RBP11.95□□□□□ -0.5
SHMT2-205ENST00000553474 FOXK2Q01167 660 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 NDUFA5Q16718 116 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 ZMAT1Q5H9K5 638 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 LCN1P1Q5VSP4 162 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 ARMC6Q6NXE6 501 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 PLBD1Q6P4A8 553 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 SHFQ7M4L6 423 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 ZNF550Q7Z398 422 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 TPRA1Q86W33 373 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 MARCH9Q86YJ5 346 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 RDH10Q8IZV5 341 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 SIRT6Q8N6T7 355 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 CELF2-AS1Q8N7Q2 184 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 OR6F1Q8NGZ6 308 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 OR4C6Q8NH72 309 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 UBL7Q96S82 380 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-205ENST00000553474 MIR1-1HGQ9H1L0 117 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 LMAN1LQ9HAT1 526 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 TIGARQ9NQ88 270 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 GPR27Q9NS67 375 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 EVA1BQ9NVM1 165 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 KCNE5Q9UJ90 142 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 ZNF221Q9UK13 617 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 POMT2Q9UKY4 750 aa11.95□□□□□ -0.5
SHMT2-205ENST00000553474 MUC3AQ02505 3323 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 A0A0C4DFX4 3053 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 SPTY2D1-AS1A0A0U1RR47 76 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 TCRBV21S2A2A0A5A6 115 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 CCDC182A6NF36 153 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 ZNF860A6NHJ4 632 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 PEX12O00623 359 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 RNF13O43567 381 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 PLPP2O43688 288 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms