RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 GANABQ14697 944 aaKnown RBP4.52□□□□□ -1.69
CKAP4-203ENST00000553039 SPA17Q15506 151 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 ZNHIT3Q15649 155 aaPredicted RBP4.52□□□□□ -1.69
CKAP4-203ENST00000553039 TSC22D1Q15714 1073 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 SLC18A3Q16572 532 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 TMEM35AQ53FP2 167 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 ARL13AQ5H913 290 aaPredicted RBP4.52□□□□□ -1.69
CKAP4-203ENST00000553039 C1QTNF12Q5T7M4 302 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 RUSC1-AS1Q66K80 236 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 OR5M10Q6IEU7 315 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 MFSD12Q6NUT3 480 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 PAQR3Q6TCH7 311 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 TEPPQ6URK8 271 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 SYT10Q6XYQ8 523 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 Q6ZT83 130 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 PIWIL4Q7Z3Z4 852 aaKnown RBP4.52□□□□□ -1.69
CKAP4-203ENST00000553039 GPR180Q86V85 440 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 TDRPQ86YL5 185 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 CCDC170Q8IYT3 715 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 PRR22Q8IZ63 422 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 ZNF786Q8N393 782 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 MRAPQ8TCY5 172 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 ADAMTS15Q8TE58 950 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 EEF1AKMT1Q8WVE0 214 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 WDR60Q8WVS4 1066 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 IPCEF1Q8WWN9 437 aaPredicted RBP4.52□□□□□ -1.69
CKAP4-203ENST00000553039 HGDQ93099 445 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 C16orf45Q96MC5 204 aaPredicted RBP4.52□□□□□ -1.69
CKAP4-203ENST00000553039 TSNARE1Q96NA8 513 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 WWC2-AS2Q96NR7 200 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 COL21A1Q96P44 957 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 GPR21Q99679 349 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 SLC6A7Q99884 636 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 NUDT16L1Q9BRJ7 211 aaKnown RBP4.52□□□□□ -1.69
CKAP4-203ENST00000553039 OSBPL8Q9BZF1 889 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 TSGA10Q9BZW7 698 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 DSN1Q9H410 356 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 TNFRSF12AQ9NP84 129 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 TREX1Q9NSU2 369 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 PDP1Q9P0J1 537 aaPredicted RBP4.52□□□□□ -1.69
CKAP4-203ENST00000553039 PHF11Q9UIL8 331 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 TRMT6Q9UJA5 497 aaKnown RBP4.52□□□□□ -1.69
CKAP4-203ENST00000553039 FBXL2Q9UKC9 423 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 SLC22A14Q9Y267 594 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 PPIAL4AQ9Y536 164 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 PRR14LQ5THK1 2151 aa4.52□□□□□ -1.69
CKAP4-203ENST00000553039 LOC100653049A0A140TA62 436 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 MAGEB16A2A368 324 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 OR2M5A3KFT3 312 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 OR5H1A6NKK0 313 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 C4orf51C9J302 202 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 H0YC42 278 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 KRT34O76011 436 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 GASTP01350 101 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 TFP02787 698 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 TCEA1P23193 301 aaKnown RBP4.51□□□□□ -1.69
CKAP4-203ENST00000553039 NMBRP28336 390 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 SSTR4P31391 388 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 IL2RGP31785 369 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 PPICP45877 212 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 SLC6A8P48029 635 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 ZNF83P51522 516 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 IDH3GP51553 393 aaPredicted RBP4.51□□□□□ -1.69
CKAP4-203ENST00000553039 TPD52P55327 224 aaPredicted RBP4.51□□□□□ -1.69
CKAP4-203ENST00000553039 CLDN20P56880 219 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 TMEM33P57088 247 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 CARD18P57730 90 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 MYBPC1Q00872 1141 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 PLCXD2Q0VAA5 305 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 BAMBIQ13145 260 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 RAB32Q13637 225 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 THOC5Q13769 683 aaKnown RBP4.51□□□□□ -1.69
CKAP4-203ENST00000553039 HLXQ14774 488 aaPredicted RBP4.51□□□□□ -1.69
CKAP4-203ENST00000553039 KIR3DS1Q14943 382 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 MORF4L2Q15014 288 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 FAM189A2Q15884 450 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 TAF9Q16594 264 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 PPP1R3AQ16821 1122 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 ARMC3Q5W041 872 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 DGAT2L6Q6ZPD8 337 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 C1QL2Q7Z5L3 287 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 TMPRSS11BQ86T26 416 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 ATG4DQ86TL0 474 aaPredicted RBP4.51□□□□□ -1.69
CKAP4-203ENST00000553039 CPNE9Q8IYJ1 553 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 BCL6BQ8N143 479 aaPredicted RBP4.51□□□□□ -1.69
CKAP4-203ENST00000553039 FBXO30Q8TB52 745 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 DOK4Q8TEW6 326 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 OSTF1Q92882 214 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 TMIGD2Q96BF3 282 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 NXNL1Q96CM4 212 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 OMA1Q96E52 524 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 MISP3Q96FF7 219 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 CCDC42Q96M95 316 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 SORCS2Q96PQ0 1159 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 F2RL3Q96RI0 385 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 RBM4BQ9BQ04 359 aaKnown RBP4.51□□□□□ -1.69
CKAP4-203ENST00000553039 CENPKQ9BS16 269 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 DESI2Q9BSY9 194 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 LRRC1Q9BTT6 524 aa4.51□□□□□ -1.69
CKAP4-203ENST00000553039 AICDAQ9GZX7 198 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms