RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 NSUN5P2Q63ZY6 315 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 RTL6Q6ICC9 239 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 OR2A2Q6IF42 318 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 EPGNQ6UW88 154 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 GDF7Q7Z4P5 450 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 ZAR1Q86SH2 424 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 TOR1AIP2Q8NFQ8 470 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 TNIP2Q8NFZ5 429 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 ZNF563Q8TA94 476 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 PNPT1Q8TCS8 783 aaKnown RBP5.34□□□□□ -1.55
CCDC65-204ENST00000552188 RNF138Q8WVD3 245 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 CKAP2Q8WWK9 683 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 HOXB13Q92826 284 aaPredicted RBP5.34□□□□□ -1.55
CCDC65-204ENST00000552188 RAB8BQ92930 207 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 ZBTB8AQ96BR9 441 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 THOC1Q96FV9 657 aaKnown RBP5.34□□□□□ -1.55
CCDC65-204ENST00000552188 REXO5Q96IC2 774 aaKnown RBP5.34□□□□□ -1.55
CCDC65-204ENST00000552188 MAELQ96JY0 434 aaKnown RBP5.34□□□□□ -1.55
CCDC65-204ENST00000552188 DMRTB1Q96MA1 342 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 CCDC115Q96NT0 180 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 OR52B2Q96RD2 323 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 SDF2Q99470 211 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 MDFIQ99750 246 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 TUBA1CQ9BQE3 449 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 CCDC28BQ9BUN5 200 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 RAD21L1Q9H4I0 556 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 SLCO1B3Q9NPD5 702 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 GPATCH2Q9NW75 528 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 ZNF629Q9UEG4 869 aaPredicted RBP5.34□□□□□ -1.55
CCDC65-204ENST00000552188 MKLN1Q9UL63 735 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 TRIM33Q9UPN9 1127 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 CARD8Q9Y2G2 431 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 ZNF337Q9Y3M9 751 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 WDR45Q9Y484 360 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 DTNAQ9Y4J8 743 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 AP4B1Q9Y6B7 739 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 KCNE3Q9Y6H6 103 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 HEATR5AQ86XA9 2040 aa5.34□□□□□ -1.55
CCDC65-204ENST00000552188 FAM234BA2RU67 622 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 SERINC4A6NH21 518 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 SLC22A20A6NK97 555 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 GJE1A6NN92 205 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 C17orf51A8MQB3 221 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 C5orf58C9J3I9 102 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 C19orf84I3L1E1 186 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 M0R082 166 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 ZNF264O43296 627 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 EIF4E2O60573 245 aaKnown RBP5.33□□□□□ -1.56
CCDC65-204ENST00000552188 SMNDC1O75940 238 aaKnown RBP eCLIP5.33□□□□□ -1.56
CCDC65-204ENST00000552188 PLGP00747 810 aaPredicted RBP5.33□□□□□ -1.56
CCDC65-204ENST00000552188 CSTAP01040 98 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 GHRHP01286 108 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 TROVE2P10155 538 aaKnown RBP eCLIP5.33□□□□□ -1.56
CCDC65-204ENST00000552188 UBL4AP11441 157 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 ZNF708P17019 499 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 ZNF17P17021 662 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 PGCP20142 388 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 IL12AP29459 219 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 CEACAM8P31997 349 aaPredicted RBP5.33□□□□□ -1.56
CCDC65-204ENST00000552188 PEX19P40855 299 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 EIF1P41567 113 aaKnown RBP5.33□□□□□ -1.56
CCDC65-204ENST00000552188 CRATP43155 626 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 LHX2P50458 406 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 ASCL1P50553 236 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 AGFG1P52594 562 aaKnown RBP5.33□□□□□ -1.56
CCDC65-204ENST00000552188 SUMO3P55854 103 aaPredicted RBP5.33□□□□□ -1.56
CCDC65-204ENST00000552188 CLDN18P56856 261 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 PHC1P78364 1004 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 IRX1P78414 480 aaPredicted RBP5.33□□□□□ -1.56
CCDC65-204ENST00000552188 ZNF117Q03924 483 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 CDSNQ15517 529 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 TMEM95Q3KNT9 176 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 TIGD2Q4W5G0 525 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 AGKQ53H12 422 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 PDZK1Q5T2W1 519 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 FBXW10Q5XX13 1052 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 SAXO2Q658L1 398 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 APOOLQ6UXV4 268 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 MSANTD1Q6ZTZ1 278 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 EIF3MQ7L2H7 374 aaKnown RBP5.33□□□□□ -1.56
CCDC65-204ENST00000552188 RNF130Q86XS8 419 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 KIF18BQ86Y91 864 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 ZNF619Q8N2I2 560 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 CNEP1R1Q8N9A8 125 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 CHDHQ8NE62 594 aaPredicted RBP5.33□□□□□ -1.56
CCDC65-204ENST00000552188 ATP6V1C2Q8NEY4 427 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 ZNF417Q8TAU3 575 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 MIPOL1Q8TD10 442 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 TMEM234Q8WY98 164 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 ROPN1LQ96C74 230 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 INTS12Q96CB8 462 aaKnown RBP5.33□□□□□ -1.56
CCDC65-204ENST00000552188 NTNG2Q96CW9 530 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 NEURL3Q96EH8 262 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 TEX37Q96LM6 180 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 RNF145Q96MT1 663 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 ZFP3Q96NJ6 502 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 ZNF587Q96SQ5 575 aaPredicted RBP5.33□□□□□ -1.56
CCDC65-204ENST00000552188 ARPC5LQ9BPX5 153 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 ZNF559Q9BR84 538 aa5.33□□□□□ -1.56
CCDC65-204ENST00000552188 INPP5KQ9BT40 448 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms