RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 SLC28A1O00337 649 aa13.13□□□□□ -0.31
TMEM106C-216ENST00000551305 GPRIN2O60269 458 aa13.13□□□□□ -0.31
TMEM106C-216ENST00000551305 NUDT14O95848 222 aa13.13□□□□□ -0.31
TMEM106C-216ENST00000551305 PROCP04070 461 aa13.13□□□□□ -0.31
TMEM106C-216ENST00000551305 YES1P07947 543 aa13.13□□□□□ -0.31
TMEM106C-216ENST00000551305 EIF1P41567 113 aaKnown RBP13.13□□□□□ -0.31
TMEM106C-216ENST00000551305 SERPINB4P48594 390 aa13.13□□□□□ -0.31
TMEM106C-216ENST00000551305 C21orf58P58505 322 aa13.13□□□□□ -0.31
TMEM106C-216ENST00000551305 POU6F2P78424 691 aaPredicted RBP13.13□□□□□ -0.31
TMEM106C-216ENST00000551305 ITGADQ13349 1161 aa13.13□□□□□ -0.31
TMEM106C-216ENST00000551305 RFTN2Q52LD8 501 aaPredicted RBP13.13□□□□□ -0.31
TMEM106C-216ENST00000551305 CFAP157Q5JU67 520 aa13.13□□□□□ -0.31
TMEM106C-216ENST00000551305 EXOSC6Q5RKV6 272 aaKnown RBP13.13□□□□□ -0.31
TMEM106C-216ENST00000551305 PODNL1Q6PEZ8 512 aa13.13□□□□□ -0.31
TMEM106C-216ENST00000551305 BHLHA15Q7RTS1 189 aaPredicted RBP13.13□□□□□ -0.31
TMEM106C-216ENST00000551305 FAM120BQ96EK7 910 aaKnown RBP13.13□□□□□ -0.31
TMEM106C-216ENST00000551305 CHMP6Q96FZ7 201 aa13.13□□□□□ -0.31
TMEM106C-216ENST00000551305 FCRL1Q96LA6 429 aa13.13□□□□□ -0.31
TMEM106C-216ENST00000551305 TRAF4Q9BUZ4 470 aaPredicted RBP13.13□□□□□ -0.31
TMEM106C-216ENST00000551305 TUBB1Q9H4B7 451 aa13.13□□□□□ -0.31
TMEM106C-216ENST00000551305 CXorf36Q9H7Y0 433 aa13.13□□□□□ -0.31
TMEM106C-216ENST00000551305 SIRT3Q9NTG7 399 aaPredicted RBP13.13□□□□□ -0.31
TMEM106C-216ENST00000551305 CISD1Q9NZ45 108 aaKnown RBP13.13□□□□□ -0.31
TMEM106C-216ENST00000551305 ING1Q9UK53 422 aaPredicted RBP13.13□□□□□ -0.31
TMEM106C-216ENST00000551305 ATRQ13535 2644 aa13.13□□□□□ -0.31
TMEM106C-216ENST00000551305 ABCA1O95477 2261 aa13.13□□□□□ -0.31
TMEM106C-216ENST00000551305 A0A1W2PNR3 127 aa13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 SHISA9B4DS77 424 aa13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 RGS14O43566 566 aa13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 TLX2O43763 284 aaPredicted RBP13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 SSX4O60224 188 aa13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 TBX19O60806 448 aa13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 LYZL6O75951 148 aa13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 HMGN2P05204 90 aaKnown RBP13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 LINC00032P0C843 101 aa13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 LCN1P31025 176 aa13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 DNAJB13P59910 316 aa13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 PDE7AQ13946 482 aa13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 LASP1Q14847 261 aaKnown RBP13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 P2RY6Q15077 328 aa13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 STK11Q15831 433 aa13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 ZCCHC12Q6PEW1 402 aa13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 DNAJC14Q6Y2X3 702 aaPredicted RBP13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 TRMT10CQ7L0Y3 403 aaKnown RBP13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 GPR119Q8TDV5 335 aa13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 ZNF764Q96H86 408 aaPredicted RBP13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 METTL2AQ96IZ6 378 aaKnown RBP13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 C16orf45Q96MC5 204 aaPredicted RBP13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 HS6ST2Q96MM7 605 aa13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 CCT7Q99832 543 aa13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 BTBD2Q9BX70 525 aa13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 POTEKPQ9BYX7 375 aa13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 IQCGQ9H095 443 aaKnown RBP13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 ANKZF1Q9H8Y5 726 aa13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 ACSS1Q9NUB1 689 aaPredicted RBP13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 ZCCHC3Q9NUD5 404 aaKnown RBP13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 PSMC3IPQ9P2W1 217 aaPredicted RBP13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 ICAM5Q9UMF0 924 aa13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 SNX8Q9Y5X2 465 aa13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 KCNE3Q9Y6H6 103 aa13.12□□□□□ -0.31
TMEM106C-216ENST00000551305 H3BQF6 201 aa13.11□□□□□ -0.31
TMEM106C-216ENST00000551305 PLIN3O60664 434 aa13.11□□□□□ -0.31
TMEM106C-216ENST00000551305 GLRA3O75311 464 aa13.11□□□□□ -0.31
TMEM106C-216ENST00000551305 FAM153BP0C7A2 387 aa13.11□□□□□ -0.31
TMEM106C-216ENST00000551305 ELK4P28324 431 aa13.11□□□□□ -0.31
TMEM106C-216ENST00000551305 P2RX1P51575 399 aa13.11□□□□□ -0.31
TMEM106C-216ENST00000551305 RPL38P63173 70 aaKnown RBP13.11□□□□□ -0.31
TMEM106C-216ENST00000551305 FAM153CQ494X1 144 aa13.11□□□□□ -0.31
TMEM106C-216ENST00000551305 KLHL26Q53HC5 615 aa13.11□□□□□ -0.31
TMEM106C-216ENST00000551305 OR2W6PQ8NHA6 318 aa13.11□□□□□ -0.31
TMEM106C-216ENST00000551305 RFWD2Q8NHY2 731 aa13.11□□□□□ -0.31
TMEM106C-216ENST00000551305 ZFP90Q8TF47 636 aa13.11□□□□□ -0.31
TMEM106C-216ENST00000551305 ZNF300Q96RE9 604 aaPredicted RBP13.11□□□□□ -0.31
TMEM106C-216ENST00000551305 PSD2Q9BQI7 771 aa13.11□□□□□ -0.31
TMEM106C-216ENST00000551305 PIGUQ9H490 435 aa13.11□□□□□ -0.31
TMEM106C-216ENST00000551305 ALG2Q9H553 416 aa13.11□□□□□ -0.31
TMEM106C-216ENST00000551305 OXSMQ9NWU1 459 aa13.11□□□□□ -0.31
TMEM106C-216ENST00000551305 NPAP1Q9NZP6 1156 aa13.11□□□□□ -0.31
TMEM106C-216ENST00000551305 B3GALT5Q9Y2C3 310 aa13.11□□□□□ -0.31
TMEM106C-216ENST00000551305 IGHV4-30-2A0A087WSY4 118 aa13.1□□□□□ -0.31
TMEM106C-216ENST00000551305 GJE1A6NN92 205 aa13.1□□□□□ -0.31
TMEM106C-216ENST00000551305 AZIN1O14977 448 aa13.1□□□□□ -0.31
TMEM106C-216ENST00000551305 IFNA2P01563 188 aa13.1□□□□□ -0.31
TMEM106C-216ENST00000551305 PRKCAP17252 672 aa13.1□□□□□ -0.31
TMEM106C-216ENST00000551305 ATP6V1C1P21283 382 aa13.1□□□□□ -0.31
TMEM106C-216ENST00000551305 PPA1Q15181 289 aa13.1□□□□□ -0.31
TMEM106C-216ENST00000551305 GALNTL6Q49A17 601 aa13.1□□□□□ -0.31
TMEM106C-216ENST00000551305 CDC73Q6P1J9 531 aa13.1□□□□□ -0.31
TMEM106C-216ENST00000551305 MTERF4Q7Z6M4 381 aaKnown RBP13.1□□□□□ -0.31
TMEM106C-216ENST00000551305 TDRPQ86YL5 185 aa13.1□□□□□ -0.31
TMEM106C-216ENST00000551305 CCDC63Q8NA47 563 aa13.1□□□□□ -0.31
TMEM106C-216ENST00000551305 OR7A2PQ8NGA2 310 aa13.1□□□□□ -0.31
TMEM106C-216ENST00000551305 STACQ99469 402 aa13.1□□□□□ -0.31
TMEM106C-216ENST00000551305 GP6Q9HCN6 339 aa13.1□□□□□ -0.31
TMEM106C-216ENST00000551305 GIMAP2Q9UG22 337 aa13.1□□□□□ -0.31
TMEM106C-216ENST00000551305 GPC6Q9Y625 555 aaPredicted RBP13.1□□□□□ -0.31
TMEM106C-216ENST00000551305 A8MV72 311 aaPredicted RBP13.09□□□□□ -0.31
TMEM106C-216ENST00000551305 HAX1O00165 279 aa13.09□□□□□ -0.31
TMEM106C-216ENST00000551305 GTPBP1O00178 669 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms