RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 SS18L1O75177 396 aaPredicted RBP11.66□□□□□ -0.54
NPAS3-209ENST00000551008 UGT2B17O75795 530 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 SMNDC1O75940 238 aaKnown RBP eCLIP11.66□□□□□ -0.54
NPAS3-209ENST00000551008 KRT16P08779 473 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 CD8BP10966 210 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 PRKCAP17252 672 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 KLK2P20151 261 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 ATP6V1C1P21283 382 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 MATN1P21941 496 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 LOXP28300 417 aaPredicted RBP11.66□□□□□ -0.54
NPAS3-209ENST00000551008 EPHA3P29320 983 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 CPOXP36551 454 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 CDKN2CP42773 168 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 EIF1AXP47813 144 aaKnown RBP11.66□□□□□ -0.54
NPAS3-209ENST00000551008 CPA2P48052 419 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 P2RX1P51575 399 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 ART1P52961 327 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 SLC18A1P54219 525 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 NME5P56597 212 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 EEFSECP57772 596 aaKnown RBP11.66□□□□□ -0.54
NPAS3-209ENST00000551008 MAGOHP61326 146 aaKnown RBP11.66□□□□□ -0.54
NPAS3-209ENST00000551008 SKP2Q13309 424 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 POU4F3Q15319 338 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 ZNF141Q15928 474 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 ARHGAP11BQ3KRB8 267 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 FAM174BQ3ZCQ3 159 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 SLC25A53Q5H9E4 307 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 PDZK1Q5T2W1 519 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 HHATQ5VTY9 493 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 AP1ARQ63HQ0 302 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 CROCCP2Q86T23 111 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 ZNF610Q8N9Z0 462 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 FAM71CQ8NEG0 241 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 OR2V1Q8NHB1 315 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 RAB8BQ92930 207 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 MAELQ96JY0 434 aaKnown RBP11.66□□□□□ -0.54
NPAS3-209ENST00000551008 CCDC115Q96NT0 180 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 DACH2Q96NX9 599 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 INPP5KQ9BT40 448 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 NMUR2Q9GZQ4 415 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 SLC6A13Q9NSD5 602 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 CCM2LQ9NUG4 571 aaPredicted RBP11.66□□□□□ -0.54
NPAS3-209ENST00000551008 MARCOQ9UEW3 520 aaPredicted RBP11.66□□□□□ -0.54
NPAS3-209ENST00000551008 DTNAQ9Y4J8 743 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 ARID1AO14497 2285 aa11.66□□□□□ -0.54
NPAS3-209ENST00000551008 DSCAMO60469 2012 aa11.65□□□□□ -0.54
NPAS3-209ENST00000551008 DEFB108AA8MXU0 73 aa11.65□□□□□ -0.54
NPAS3-209ENST00000551008 KIAA0513O60268 411 aa11.65□□□□□ -0.54
NPAS3-209ENST00000551008 ADAM11O75078 769 aa11.65□□□□□ -0.54
NPAS3-209ENST00000551008 CPSF4O95639 269 aaKnown RBP11.65□□□□□ -0.54
NPAS3-209ENST00000551008 OR12D1P0DN82 309 aa11.65□□□□□ -0.54
NPAS3-209ENST00000551008 HPGDP15428 266 aa11.65□□□□□ -0.54
NPAS3-209ENST00000551008 ELK4P28324 431 aa11.65□□□□□ -0.54
NPAS3-209ENST00000551008 SFTPDP35247 375 aa11.65□□□□□ -0.54
NPAS3-209ENST00000551008 CD79BP40259 229 aa11.65□□□□□ -0.54
NPAS3-209ENST00000551008 ZNF41P51814 821 aaPredicted RBP11.65□□□□□ -0.54
NPAS3-209ENST00000551008 SUMO3P55854 103 aaPredicted RBP11.65□□□□□ -0.54
NPAS3-209ENST00000551008 RPS3AP61247 264 aaKnown RBP11.65□□□□□ -0.54
NPAS3-209ENST00000551008 EEF1A1P68104 462 aaKnown RBP11.65□□□□□ -0.54
NPAS3-209ENST00000551008 EEF1A1P5Q5VTE0 462 aa11.65□□□□□ -0.54
NPAS3-209ENST00000551008 TYW3Q6IPR3 259 aaKnown RBP11.65□□□□□ -0.54
NPAS3-209ENST00000551008 TNFAIP8L2Q6P589 184 aaPredicted RBP11.65□□□□□ -0.54
NPAS3-209ENST00000551008 PAMR1Q6UXH9 720 aa11.65□□□□□ -0.54
NPAS3-209ENST00000551008 FRRS1Q6ZNA5 592 aa11.65□□□□□ -0.54
NPAS3-209ENST00000551008 ESPNLQ6ZVH7 1005 aa11.65□□□□□ -0.54
NPAS3-209ENST00000551008 FAM214BQ7L5A3 538 aa11.65□□□□□ -0.54
NPAS3-209ENST00000551008 CHMP1BQ7LBR1 199 aa11.65□□□□□ -0.54
NPAS3-209ENST00000551008 HMGN2P46Q86SG4 172 aa11.65□□□□□ -0.54
NPAS3-209ENST00000551008 FBXO27Q8NI29 283 aa11.65□□□□□ -0.54
NPAS3-209ENST00000551008 NINJ1Q92982 152 aa11.65□□□□□ -0.54
NPAS3-209ENST00000551008 ARL8AQ96BM9 186 aa11.65□□□□□ -0.54
NPAS3-209ENST00000551008 ZG16BQ96DA0 208 aa11.65□□□□□ -0.54
NPAS3-209ENST00000551008 NEURL3Q96EH8 262 aa11.65□□□□□ -0.54
NPAS3-209ENST00000551008 KLHL15Q96M94 604 aa11.65□□□□□ -0.54
NPAS3-209ENST00000551008 WFIKKN1Q96NZ8 548 aa11.65□□□□□ -0.54
NPAS3-209ENST00000551008 HOXD1Q9GZZ0 328 aa11.65□□□□□ -0.54
NPAS3-209ENST00000551008 SAP130Q9H0E3 1048 aa11.65□□□□□ -0.54
NPAS3-209ENST00000551008 MKLN1Q9UL63 735 aa11.65□□□□□ -0.54
NPAS3-209ENST00000551008 CADP27708 2225 aa11.65□□□□□ -0.54
NPAS3-209ENST00000551008 SERINC4A6NH21 518 aa11.64□□□□□ -0.55
NPAS3-209ENST00000551008 HMGN4O00479 90 aa11.64□□□□□ -0.55
NPAS3-209ENST00000551008 HDAC3O15379 428 aa11.64□□□□□ -0.55
NPAS3-209ENST00000551008 H6PDO95479 791 aa11.64□□□□□ -0.55
NPAS3-209ENST00000551008 UBL4AP11441 157 aa11.64□□□□□ -0.55
NPAS3-209ENST00000551008 UQCRC2P22695 453 aa11.64□□□□□ -0.55
NPAS3-209ENST00000551008 UGT2B10P36537 528 aa11.64□□□□□ -0.55
NPAS3-209ENST00000551008 GPR68Q15743 365 aa11.64□□□□□ -0.55
NPAS3-209ENST00000551008 MAPK11Q15759 364 aa11.64□□□□□ -0.55
NPAS3-209ENST00000551008 SGCBQ16585 318 aa11.64□□□□□ -0.55
NPAS3-209ENST00000551008 ZNF239Q16600 458 aaKnown RBP11.64□□□□□ -0.55
NPAS3-209ENST00000551008 SLC9B1Q4ZJI4 515 aa11.64□□□□□ -0.55
NPAS3-209ENST00000551008 HBMQ6B0K9 141 aa11.64□□□□□ -0.55
NPAS3-209ENST00000551008 ZNF550Q7Z398 422 aa11.64□□□□□ -0.55
NPAS3-209ENST00000551008 LILRA2Q8N149 483 aa11.64□□□□□ -0.55
NPAS3-209ENST00000551008 ZNF614Q8N883 585 aa11.64□□□□□ -0.55
NPAS3-209ENST00000551008 ZNF527Q8NB42 609 aa11.64□□□□□ -0.55
NPAS3-209ENST00000551008 RNF128Q8TEB7 428 aa11.64□□□□□ -0.55
NPAS3-209ENST00000551008 ABHD3Q8WU67 409 aa11.64□□□□□ -0.55
NPAS3-209ENST00000551008 ROBO4Q8WZ75 1007 aa11.64□□□□□ -0.55
NPAS3-209ENST00000551008 OR52B2Q96RD2 323 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms