RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, human

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5B-208	ENST00000550283	FOXF2	Q12947	444 aa		10.11	□□□□□ -0.79
RAB5B-208	ENST00000550283	CAPRIN1	Q14444	709 aa	Known RBP	10.11	□□□□□ -0.79
RAB5B-208	ENST00000550283	FGFBP1	Q14512	234 aa		10.11	□□□□□ -0.79
RAB5B-208	ENST00000550283	ADRM1	Q16186	407 aa		10.11	□□□□□ -0.79
RAB5B-208	ENST00000550283	CTU2	Q2VPK5	515 aa	Known RBP	10.11	□□□□□ -0.79
RAB5B-208	ENST00000550283	B3GNT6	Q6ZMB0	384 aa		10.11	□□□□□ -0.79
RAB5B-208	ENST00000550283	MAMDC2	Q7Z304	686 aa	Predicted RBP	10.11	□□□□□ -0.79
RAB5B-208	ENST00000550283	TREML1	Q86YW5	311 aa		10.11	□□□□□ -0.79
RAB5B-208	ENST00000550283	ZNF619	Q8N2I2	560 aa		10.11	□□□□□ -0.79
RAB5B-208	ENST00000550283	ZNF808	Q8N4W9	903 aa	Predicted RBP	10.11	□□□□□ -0.79
RAB5B-208	ENST00000550283	RELL2	Q8NC24	303 aa	Predicted RBP	10.11	□□□□□ -0.79
RAB5B-208	ENST00000550283	FAM71C	Q8NEG0	241 aa		10.11	□□□□□ -0.79
RAB5B-208	ENST00000550283	SMPDL3B	Q92485	455 aa		10.11	□□□□□ -0.79
RAB5B-208	ENST00000550283	FIG4	Q92562	907 aa		10.11	□□□□□ -0.79
RAB5B-208	ENST00000550283	TMEM19	Q96HH6	336 aa		10.11	□□□□□ -0.79
RAB5B-208	ENST00000550283	TRNT1	Q96Q11	434 aa	Known RBP	10.11	□□□□□ -0.79
RAB5B-208	ENST00000550283	TRIB1	Q96RU8	372 aa		10.11	□□□□□ -0.79
RAB5B-208	ENST00000550283	RMND5A	Q9H871	391 aa		10.11	□□□□□ -0.79
RAB5B-208	ENST00000550283	SDHAF3	Q9NRP4	125 aa		10.11	□□□□□ -0.79
RAB5B-208	ENST00000550283	EXD2	Q9NVH0	621 aa		10.11	□□□□□ -0.79
RAB5B-208	ENST00000550283	CLCF1	Q9UBD9	225 aa		10.11	□□□□□ -0.79
RAB5B-208	ENST00000550283	DCHS2	Q6V1P9	2916 aa		10.11	□□□□□ -0.79
RAB5B-208	ENST00000550283	PHF3	Q92576	2039 aa	Known RBP	10.11	□□□□□ -0.79
RAB5B-208	ENST00000550283	CENPE	Q02224	2701 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	AGAP5	A6NIR3	686 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	FIGNL2	A6NMB9	653 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	FAM90A27P	A6NNH2	459 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	CLCA1	A8K7I4	914 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	SEC14L5	O43304	696 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	DNAJA2	O60884	412 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	WDR1	O75083	606 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	GCM2	O75603	506 aa	Predicted RBP	10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	CYP7B1	O75881	506 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	KRT75	O95678	551 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	EPPIN	O95925	133 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	ACTL6A	O96019	429 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	UBTFL6	P0CB48	400 aa	Predicted RBP	10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	TROVE2	P10155	538 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	NR2F1	P10589	423 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	UBL4A	P11441	157 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	BMP2	P12643	396 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	PEPD	P12955	493 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	PRG2	P13727	222 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	HPGD	P15428	266 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	CHM	P24386	653 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	SLC6A8	P48029	635 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	ZNF136	P52737	540 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	PER3	P56645	1201 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	MTPN	P58546	118 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	TFF3	Q07654	80 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	RUNDC3A	Q59EK9	446 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	PTOV1	Q86YD1	416 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	CLIP4	Q8N3C7	705 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	DPP10	Q8N608	796 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	TRIML2	Q8N7C3	387 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	POU5F2	Q8N7G0	328 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	FBXO27	Q8NI29	283 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	ADGRG7	Q96K78	797 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	WFDC6	Q9BQY6	131 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	THUMPD3	Q9BV44	507 aa	Known RBP	10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	KLHL14	Q9P2G3	628 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	SUCO	Q9UBS9	1254 aa	Known RBP	10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	PCDHGB3	Q9Y5G1	929 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283	HEATR5A	Q86XA9	2040 aa		10.1	□□□□□ -0.79
RAB5B-208	ENST00000550283		A0A0J9YW62	118 aa		10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	AHRR	A9YTQ3	701 aa		10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	GTPBP1	O00178	669 aa	Known RBP	10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	ZNF264	O43296	627 aa		10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	FRS3	O43559	492 aa		10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	AK1	P00568	194 aa		10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	CSTA	P01040	98 aa		10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	GUSB	P08236	651 aa		10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	SNRPB2	P08579	225 aa	Known RBP	10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	GP1BB	P13224	206 aa		10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	PRKCA	P17252	672 aa		10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	POU3F2	P20265	443 aa	Predicted RBP	10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	CEACAM8	P31997	349 aa	Predicted RBP	10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	CLK3	P49761	638 aa	Known RBP	10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	GZMM	P51124	257 aa		10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	P2RX1	P51575	399 aa		10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	CCR4	P51679	360 aa		10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	LRRC74A	Q0VAA2	488 aa		10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	SNTB1	Q13884	538 aa	Known RBP	10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	QPRT	Q15274	297 aa		10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	ZNF630	Q2M218	657 aa	Predicted RBP	10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	RABL3	Q5HYI8	236 aa		10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	ATAD3B	Q5T9A4	648 aa		10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	METTL21C	Q5VZV1	264 aa		10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	NSUN5P2	Q63ZY6	315 aa		10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	ZNF836	Q6ZNA1	936 aa		10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	LRRC74B	Q6ZQY2	392 aa		10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	TRPM8	Q7Z2W7	1104 aa		10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	DHDDS	Q86SQ9	333 aa		10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	SNX32	Q86XE0	403 aa		10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	C10orf67	Q8IYJ2	551 aa		10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	GCNT2	Q8N0V5	402 aa		10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	TMCO5A	Q8N6Q1	288 aa		10.09	□□□□□ -0.79
RAB5B-208	ENST00000550283	OR10Q1	Q8NGQ4	319 aa		10.09	□□□□□ -0.79

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