RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 CLDN5O00501 218 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 COCHO43405 550 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 HUS1O60921 280 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 APODP05090 189 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 GPIP06744 558 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 CYP11B1P15538 503 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 ATP6V1C1P21283 382 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 PTPN6P29350 595 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 GCKP35557 465 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 PTGFRP43088 359 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 ACADSBP45954 432 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 NPY2RP49146 381 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 CCNHP51946 323 aaPredicted RBP5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 DCDC1P59894 354 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 NOP14P78316 857 aaKnown RBP5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 P2RY6Q15077 328 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 FGD3Q5JSP0 725 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 EOGTQ5NDL2 527 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 ARHGAP17Q68EM7 881 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 RFPL4BQ6ZWI9 263 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 C17orf64Q86WR6 236 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 CACUL1Q86Y37 369 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 TMEM86AQ8N2M4 240 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 IQCF1Q8N6M8 205 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 CCDC185Q8N715 623 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 LRRC52Q8N7C0 313 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 RNF139Q8WU17 664 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 APOBEC4Q8WW27 367 aaKnown RBP5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 TMEM37Q8WXS4 190 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 LZICQ8WZA0 190 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 LURAP1Q96LR2 239 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 NDUFAF3Q9BU61 184 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 FAM124BQ9H5Z6 455 aaPredicted RBP5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 RBAKQ9NYW8 714 aaPredicted RBP5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 MIOXQ9UGB7 285 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 PCSK1NQ9UHG2 260 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 KLHDC2Q9Y2U9 406 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 RNF115Q9Y4L5 304 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 MYLKQ15746 1914 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 COL12A1Q99715 3063 aa5.35□□□□□ -1.55
TGFBR1-208ENST00000550253 A0A087WZ39 114 aa5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 IGHV4-61A0A0C4DH41 118 aa5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 K7EQM0 130 aa5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 PRRG2O14669 202 aa5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 NUDT21O43809 227 aaKnown RBP5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 PPP1R3DO95685 299 aa5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 IGHV4-59P01825 116 aa5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 RPA2P15927 270 aa5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 CCNCP24863 283 aa5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 TAGLN2P37802 199 aaKnown RBP5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 CLDN6P56747 220 aa5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 LTBQ06643 244 aa5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 TECRLQ5HYJ1 363 aa5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 NIPAL3Q6P499 406 aa5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 CBLN3Q6UW01 205 aa5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 PAQR9Q6ZVX9 377 aa5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 APLFQ8IW19 511 aaPredicted RBP5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 EIF1ADQ8N9N8 165 aaKnown RBP5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 TUBGCP3Q96CW5 907 aa5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 DNAJC19Q96DA6 116 aa5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 NAF1Q96HR8 494 aaKnown RBP5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 IL17FQ96PD4 163 aa5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 ZNF607Q96SK3 696 aa5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 GABRG3Q99928 467 aa5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 SLC39A3Q9BRY0 314 aa5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 WRAP53Q9BUR4 548 aaKnown RBP5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 SPHK2Q9NRA0 654 aa5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 INTS9Q9NV88 658 aaKnown RBP5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 ZNHIT6Q9NWK9 470 aaKnown RBP5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 RDH8Q9NYR8 311 aa5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 LCMT1Q9UIC8 334 aa5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 ZNF490Q9ULM2 529 aaPredicted RBP5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 FAF1Q9UNN5 650 aaPredicted RBP5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 BOD1L1Q8NFC6 3051 aa5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 NYNRINQ9P2P1 1898 aaKnown RBP5.34□□□□□ -1.55
TGFBR1-208ENST00000550253 RELNP78509 3460 aa5.33□□□□□ -1.56
TGFBR1-208ENST00000550253 C15orf38-AP3S2A0A0A6YYH1 394 aa5.33□□□□□ -1.56
TGFBR1-208ENST00000550253 PRAC2D3DTV9 90 aa5.33□□□□□ -1.56
TGFBR1-208ENST00000550253 SGK494L7N484 410 aa5.33□□□□□ -1.56
TGFBR1-208ENST00000550253 SDHDO14521 159 aa5.33□□□□□ -1.56
TGFBR1-208ENST00000550253 CCSO14618 274 aa5.33□□□□□ -1.56
TGFBR1-208ENST00000550253 NDUFA7O95182 113 aa5.33□□□□□ -1.56
TGFBR1-208ENST00000550253 MBD3O95983 291 aa5.33□□□□□ -1.56
TGFBR1-208ENST00000550253 GOT2P00505 430 aaKnown RBP5.33□□□□□ -1.56
TGFBR1-208ENST00000550253 HPRP00739 348 aa5.33□□□□□ -1.56
TGFBR1-208ENST00000550253 CISD3P0C7P0 127 aa5.33□□□□□ -1.56
TGFBR1-208ENST00000550253 ZDHHC11BP0C7U3 371 aa5.33□□□□□ -1.56
TGFBR1-208ENST00000550253 MBL2P11226 248 aaPredicted RBP5.33□□□□□ -1.56
TGFBR1-208ENST00000550253 WARSP23381 471 aaKnown RBP5.33□□□□□ -1.56
TGFBR1-208ENST00000550253 CEACAM8P31997 349 aaPredicted RBP5.33□□□□□ -1.56
TGFBR1-208ENST00000550253 DVL1P1P54792 670 aaPredicted RBP5.33□□□□□ -1.56
TGFBR1-208ENST00000550253 BTG1P62324 171 aa5.33□□□□□ -1.56
TGFBR1-208ENST00000550253 TRIP10Q15642 601 aa5.33□□□□□ -1.56
TGFBR1-208ENST00000550253 C3AR1Q16581 482 aa5.33□□□□□ -1.56
TGFBR1-208ENST00000550253 CCDC122Q5T0U0 273 aa5.33□□□□□ -1.56
TGFBR1-208ENST00000550253 WLSQ5T9L3 541 aa5.33□□□□□ -1.56
TGFBR1-208ENST00000550253 LCE4AQ5TA78 99 aa5.33□□□□□ -1.56
TGFBR1-208ENST00000550253 ASPHD2Q6ICH7 369 aa5.33□□□□□ -1.56
TGFBR1-208ENST00000550253 DBX2Q6ZNG2 339 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms