RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 NUDT14O95848 222 aa19.26■□□□□ 0.67
VPS29-206ENST00000549578 SERPINA1P01009 418 aa19.26■□□□□ 0.67
VPS29-206ENST00000549578 IFNA14P01570 189 aa19.26■□□□□ 0.67
VPS29-206ENST00000549578 GKN3PP0CG01 181 aa19.26■□□□□ 0.67
VPS29-206ENST00000549578 MSX1P28360 303 aa19.26■□□□□ 0.67
VPS29-206ENST00000549578 KCNJ5P48544 419 aa19.26■□□□□ 0.67
VPS29-206ENST00000549578 ARSKQ6UWY0 536 aa19.26■□□□□ 0.67
VPS29-206ENST00000549578 GRAMD2AQ8IUY3 354 aa19.26■□□□□ 0.67
VPS29-206ENST00000549578 ULK2Q8IYT8 1036 aa19.26■□□□□ 0.67
VPS29-206ENST00000549578 C1GALT1C1Q96EU7 318 aa19.26■□□□□ 0.67
VPS29-206ENST00000549578 DEFB127Q9H1M4 99 aa19.26■□□□□ 0.67
VPS29-206ENST00000549578 ARMC7Q9H6L4 198 aa19.26■□□□□ 0.67
VPS29-206ENST00000549578 EXOSC3Q9NQT5 275 aaKnown RBP19.26■□□□□ 0.67
VPS29-206ENST00000549578 DKKL1Q9UK85 242 aa19.26■□□□□ 0.67
VPS29-206ENST00000549578 NPIPA5E9PKD4 350 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 ZNF682O95780 498 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 PRG2P13727 222 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 MST1P26927 711 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 DPP4P27487 766 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 RYKP34925 604 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 MLLT10P55197 1068 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 MS4A2Q01362 244 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 TRIM25Q14258 630 aaKnown RBP19.25■□□□□ 0.67
VPS29-206ENST00000549578 ZSWIM7Q19AV6 140 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 SOWAHCQ53LP3 525 aaPredicted RBP19.25■□□□□ 0.67
VPS29-206ENST00000549578 CMPK2Q5EBM0 449 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 SIAH3Q8IW03 269 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 BHLHE22Q8NFJ8 381 aaPredicted RBP19.25■□□□□ 0.67
VPS29-206ENST00000549578 TOR1AIP2Q8NFQ8 470 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 OR5W2Q8NH69 310 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 RASSF5Q8WWW0 418 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 ZNF524Q96C55 264 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 TPD52L3Q96J77 140 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 WFDC6Q9BQY6 131 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 ZDHHC11Q9H8X9 412 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 GORASP2Q9H8Y8 452 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 ASF1BQ9NVP2 202 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 SLC13A4Q9UKG4 626 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 NPIPA1Q9UND3 350 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 VDAC3Q9Y277 283 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 CHD6Q8TD26 2715 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 COL6A6A6NMZ7 2263 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 ANKUB1A6NFN9 424 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 AP3D1O14617 1153 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 FESP07332 822 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 ATP6V1B2P21281 511 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 SUMO3P55854 103 aaPredicted RBP19.25■□□□□ 0.67
VPS29-206ENST00000549578 DSCR4P56555 118 aaPredicted RBP19.25■□□□□ 0.67
VPS29-206ENST00000549578 HOXC5Q00444 222 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 TOMM34Q15785 309 aaPredicted RBP19.25■□□□□ 0.67
VPS29-206ENST00000549578 ZSCAN26Q16670 478 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 CYP2R1Q6VVX0 501 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 YRDCQ86U90 279 aaKnown RBP19.25■□□□□ 0.67
VPS29-206ENST00000549578 FAM83FQ8NEG4 500 aaPredicted RBP19.25■□□□□ 0.67
VPS29-206ENST00000549578 GPR119Q8TDV5 335 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 OLAHQ9NV23 265 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 ADPRHL2Q9NX46 363 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 LIPGQ9Y5X9 500 aa19.25■□□□□ 0.67
VPS29-206ENST00000549578 FREM3P0C091 2139 aa19.24■□□□□ 0.67
VPS29-206ENST00000549578 CFAP73A6NFT4 308 aa19.24■□□□□ 0.67
VPS29-206ENST00000549578 M0R3H8 397 aa19.24■□□□□ 0.67
VPS29-206ENST00000549578 LGI1O95970 557 aa19.24■□□□□ 0.67
VPS29-206ENST00000549578 TNFRSF1BP20333 461 aa19.24■□□□□ 0.67
VPS29-206ENST00000549578 SRD5A2P31213 254 aa19.24■□□□□ 0.67
VPS29-206ENST00000549578 ZNF41P51814 821 aaPredicted RBP19.24■□□□□ 0.67
VPS29-206ENST00000549578 SELENOWP63302 87 aa19.24■□□□□ 0.67
VPS29-206ENST00000549578 FOXK1P85037 733 aa19.24■□□□□ 0.67
VPS29-206ENST00000549578 CBFBQ13951 182 aa19.24■□□□□ 0.67
VPS29-206ENST00000549578 ZNF324BQ6AW86 544 aaPredicted RBP19.24■□□□□ 0.67
VPS29-206ENST00000549578 CBLL1Q75N03 491 aa19.24■□□□□ 0.67
VPS29-206ENST00000549578 SPPL2CQ8IUH8 684 aa19.24■□□□□ 0.67
VPS29-206ENST00000549578 FAR1Q8WVX9 515 aa19.24■□□□□ 0.67
VPS29-206ENST00000549578 NR4A3Q92570 626 aa19.24■□□□□ 0.67
VPS29-206ENST00000549578 ASB9Q96DX5 294 aa19.24■□□□□ 0.67
VPS29-206ENST00000549578 NSMCE2Q96MF7 247 aa19.24■□□□□ 0.67
VPS29-206ENST00000549578 MED17Q9NVC6 651 aa19.24■□□□□ 0.67
VPS29-206ENST00000549578 QPCTLQ9NXS2 382 aa19.24■□□□□ 0.67
VPS29-206ENST00000549578 KLHL28Q9NXS3 571 aa19.24■□□□□ 0.67
VPS29-206ENST00000549578 TAS2R10Q9NYW0 307 aa19.24■□□□□ 0.67
VPS29-206ENST00000549578 ACTR3BQ9P1U1 418 aa19.24■□□□□ 0.67
VPS29-206ENST00000549578 BAG5Q9UL15 447 aa19.24■□□□□ 0.67
VPS29-206ENST00000549578 RPH3AQ9Y2J0 694 aaPredicted RBP19.24■□□□□ 0.67
VPS29-206ENST00000549578 FAM208BQ5VWN6 2430 aa19.24■□□□□ 0.67
VPS29-206ENST00000549578 SHISA8B8ZZ34 492 aa19.23■□□□□ 0.67
VPS29-206ENST00000549578 SYT5O00445 386 aa19.23■□□□□ 0.67
VPS29-206ENST00000549578 SUV39H1O43463 412 aa19.23■□□□□ 0.67
VPS29-206ENST00000549578 ZIC3O60481 467 aa19.23■□□□□ 0.67
VPS29-206ENST00000549578 HPNP05981 417 aa19.23■□□□□ 0.67
VPS29-206ENST00000549578 HK1P19367 917 aa19.23■□□□□ 0.67
VPS29-206ENST00000549578 ACAA2P42765 397 aaKnown RBP19.23■□□□□ 0.67
VPS29-206ENST00000549578 EPS8Q12929 822 aa19.23■□□□□ 0.67
VPS29-206ENST00000549578 GANABQ14697 944 aaKnown RBP19.23■□□□□ 0.67
VPS29-206ENST00000549578 SLC10A1Q14973 349 aa19.23■□□□□ 0.67
VPS29-206ENST00000549578 PLPPR5Q32ZL2 321 aa19.23■□□□□ 0.67
VPS29-206ENST00000549578 WIPI1Q5MNZ9 446 aaPredicted RBP19.23■□□□□ 0.67
VPS29-206ENST00000549578 YTHDF3Q7Z739 585 aaKnown RBP19.23■□□□□ 0.67
VPS29-206ENST00000549578 VTCN1Q7Z7D3 282 aa19.23■□□□□ 0.67
VPS29-206ENST00000549578 DHFR2Q86XF0 187 aa19.23■□□□□ 0.67
VPS29-206ENST00000549578 LACC1Q8IV20 430 aa19.23■□□□□ 0.67
VPS29-206ENST00000549578 ZNF440Q8IYI8 595 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms