RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-208	ENST00000549205	AMIGO2	Q86SJ2	522 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	TSPYL5	Q86VY4	417 aa	Predicted RBP	11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	ZNF227	Q86WZ6	799 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	TMCO5A	Q8N6Q1	288 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	PSD4	Q8NDX1	1056 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	TOR1AIP2	Q8NFQ8	470 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	FDCSP	Q8NFU4	85 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	OR2T29	Q8NH02	315 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	DUSP19	Q8WTR2	217 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	ZCCHC14	Q8WYQ9	949 aa	Known RBP	11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	NR4A3	Q92570	626 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	CENPN	Q96H22	339 aa	Predicted RBP	11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	SH3YL1	Q96HL8	342 aa	Predicted RBP	11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	PRRC1	Q96M27	445 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	MCHR1	Q99705	422 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	PIP5K1A	Q99755	562 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	ZNF559	Q9BR84	538 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	ANGPTL4	Q9BY76	406 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	POLR2J2	Q9GZM3	115 aa	Known RBP	11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	POLR2J3	Q9H1A7	115 aa	Known RBP	11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	TIMMDC1	Q9NPL8	285 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	SDHAF3	Q9NRP4	125 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	SACM1L	Q9NTJ5	587 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	LRFN1	Q9P244	771 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	ACAD8	Q9UKU7	415 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	A4GNT	Q9UNA3	340 aa		11.17	□□□□□ -0.62
ERBB3-208	ENST00000549205	IGLV3-32	A0A0A0MS00	114 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	OR5H15	A6NDH6	313 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	C17orf51	A8MQB3	221 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205		J3KTA2	159 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	TAF4	O00268	1085 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	NEURL1	O76050	574 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	F10	P00742	488 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205		P04436	131 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	LINGO3	P0C6S8	592 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	HTR2A	P28223	471 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	SLC6A8	P48029	635 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	CCR4	P51679	360 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	SLC34A1	Q06495	639 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	OR1C1	Q15619	314 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	ENTPD8	Q5MY95	495 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	BORA	Q6PGQ7	559 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	IGFL2	Q6UWQ7	119 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	PLEKHM3	Q6ZWE6	761 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	ZNF605	Q86T29	641 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	MDS2	Q8NDY4	140 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	OR5W2	Q8NH69	310 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	B4GALNT2	Q8NHY0	566 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	HAS2	Q92819	552 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	ARSG	Q96EG1	525 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	DHRS1	Q96LJ7	313 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	BDH2	Q9BUT1	245 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	PRR14	Q9BWN1	585 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	TRIM2	Q9C040	744 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	SEMA6A	Q9H2E6	1030 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	NTN4	Q9HB63	628 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	PROK2	Q9HC23	129 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	PLA2G3	Q9NZ20	509 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	PPP4R1L	Q9P1A2	415 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	ICAM5	Q9UMF0	924 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	NTNG1	Q9Y2I2	539 aa		11.16	□□□□□ -0.62
ERBB3-208	ENST00000549205	C2orf72	A6NCS6	295 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	TMEM8B	A6NDV4	472 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	CPSF4L	A6NMK7	179 aa	Known RBP	11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	FAAH	O00519	579 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	GNGT2	O14610	69 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	ADAMDEC1	O15204	470 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	SLC25A12	O75746	678 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	SNX4	O95219	450 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	OR5F1	O95221	314 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	UQCRB	P14927	111 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	MSX1	P28360	303 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	RRM2	P31350	389 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	RYK	P34925	604 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	P2RX1	P51575	399 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	SUMO3	P55854	103 aa	Predicted RBP	11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	SESN3	P58005	492 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	SMIM11A	P58511	58 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	TAS2R41	P59536	307 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	SPIB	Q01892	262 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	PIN1	Q13526	163 aa	Predicted RBP	11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	CBFB	Q13951	182 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	OR1Q1	Q15612	314 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	COL28A1	Q2UY09	1125 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	SPINK14	Q6IE38	97 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	OR5M10	Q6IEU7	315 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	OFCC1	Q8IZS5	231 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	LSMEM1	Q8N8F7	131 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	PIK3C3	Q8NEB9	887 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	ADAMTS16	Q8TE57	1224 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	SNRNP27	Q8WVK2	155 aa	Known RBP	11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	SIGLEC12	Q96PQ1	595 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	SMAD5	Q99717	465 aa	Known RBP	11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	FNDC11	Q9BVV2	318 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	REEP1	Q9H902	201 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	ACER3	Q9NUN7	267 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	VNN3	Q9NY84	501 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	PRDM4	Q9UKN5	801 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	TESMIN	Q9Y4I5	508 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	PCDHGA9	Q9Y5G4	932 aa	Known RBP	11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms