RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 FAM110BQ8TC76 370 aa10.61□□□□□ -0.71
TRAFD1-205ENST00000548277 EPS8L3Q8TE67 593 aaKnown RBP10.61□□□□□ -0.71
TRAFD1-205ENST00000548277 RNF128Q8TEB7 428 aa10.61□□□□□ -0.71
TRAFD1-205ENST00000548277 TMEM158Q8WZ71 300 aa10.61□□□□□ -0.71
TRAFD1-205ENST00000548277 HSD17B8Q92506 261 aa10.61□□□□□ -0.71
TRAFD1-205ENST00000548277 CDS1Q92903 461 aa10.61□□□□□ -0.71
TRAFD1-205ENST00000548277 PPCDCQ96CD2 204 aa10.61□□□□□ -0.71
TRAFD1-205ENST00000548277 GIMAP5Q96F15 307 aa10.61□□□□□ -0.71
TRAFD1-205ENST00000548277 TSSK3Q96PN8 268 aa10.61□□□□□ -0.71
TRAFD1-205ENST00000548277 RHNO1Q9BSD3 238 aa10.61□□□□□ -0.71
TRAFD1-205ENST00000548277 OR10A4Q9H209 315 aa10.61□□□□□ -0.71
TRAFD1-205ENST00000548277 TIGARQ9NQ88 270 aa10.61□□□□□ -0.71
TRAFD1-205ENST00000548277 UBQLN4Q9NRR5 601 aa10.61□□□□□ -0.71
TRAFD1-205ENST00000548277 OXSMQ9NWU1 459 aa10.61□□□□□ -0.71
TRAFD1-205ENST00000548277 CARD8Q9Y2G2 431 aa10.61□□□□□ -0.71
TRAFD1-205ENST00000548277 FBN3Q75N90 2809 aa10.61□□□□□ -0.71
TRAFD1-205ENST00000548277 IGHV4-30-2A0A087WSY4 118 aa10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 FAM234BA2RU67 622 aa10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 TTC36A6NLP5 189 aa10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 GTPBP1O00178 669 aaKnown RBP10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 FESP07332 822 aa10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 YES1P07947 543 aa10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 LINGO3P0C6S8 592 aa10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 PABPC4LP0CB38 370 aaKnown RBP10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 KRT4P19013 534 aa10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 EDNRAP25101 427 aa10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 MAP3K8P41279 467 aa10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 SRSF2Q01130 221 aaKnown RBP10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 ZNF117Q03924 483 aa10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 ITGADQ13349 1161 aa10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 KIAA0040Q15053 153 aa10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 ETFDHQ16134 617 aa10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 TRIM46Q7Z4K8 759 aa10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 C4orf33Q8N1A6 199 aa10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 PIAS4Q8N2W9 510 aaPredicted RBP10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 OR6Y1Q8NGX8 325 aa10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 ZFP28Q8NHY6 868 aa10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 ACTRT2Q8TDY3 377 aa10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 CPNE4Q96A23 557 aaPredicted RBP10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 DNAJA3Q96EY1 480 aa10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 TRAF4Q9BUZ4 470 aaPredicted RBP10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 TRIM2Q9C040 744 aa10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 REEP4Q9H6H4 257 aa10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 CXorf36Q9H7Y0 433 aa10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 PPCSQ9HAB8 311 aa10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 LRTM1Q9HBL6 345 aa10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 KLHL13Q9P2N7 655 aa10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 B3GALT5Q9Y2C3 310 aa10.6□□□□□ -0.71
TRAFD1-205ENST00000548277 A0A1W2PR80 420 aa10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 TLDC2A0PJX2 215 aa10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 SHISA9B4DS77 424 aa10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 H3BQF6 201 aa10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 ABCD4O14678 606 aa10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 PHF1O43189 567 aaPredicted RBP10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 RSL1D1O76021 490 aaKnown RBP10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 IGHV3-9P01782 118 aa10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 LINC00032P0C843 101 aa10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 UROSP10746 265 aa10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 POU6F2P78424 691 aaPredicted RBP10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 LASP1Q14847 261 aaKnown RBP10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 PPA1Q15181 289 aa10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 RNPS1Q15287 305 aaKnown RBP10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 GALNTL6Q49A17 601 aa10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 CDC73Q6P1J9 531 aa10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 IKBIPQ70UQ0 350 aa10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 C10orf107Q8IVU9 208 aa10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 OR2T11Q8NH01 316 aa10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 FAM76AQ8TAV0 307 aa10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 ZNF524Q96C55 264 aa10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 MS4A4EQ96PG1 132 aa10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 ZNF300Q96RE9 604 aaPredicted RBP10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 KCNK17Q96T54 332 aa10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 C1QTNF6Q9BXI9 259 aa10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 IQCGQ9H095 443 aaKnown RBP10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 ANKZF1Q9H8Y5 726 aa10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 ZCCHC3Q9NUD5 404 aaKnown RBP10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 C1orf109Q9NX04 203 aa10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 WBP11Q9Y2W2 641 aaKnown RBP10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 CCL27Q9Y4X3 112 aa10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 SNX8Q9Y5X2 465 aa10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 KCNE3Q9Y6H6 103 aa10.59□□□□□ -0.71
TRAFD1-205ENST00000548277 C7orf72A4D263 438 aa10.58□□□□□ -0.72
TRAFD1-205ENST00000548277 SLC28A1O00337 649 aa10.58□□□□□ -0.72
TRAFD1-205ENST00000548277 RGS14O43566 566 aa10.58□□□□□ -0.72
TRAFD1-205ENST00000548277 CYP7B1O75881 506 aa10.58□□□□□ -0.72
TRAFD1-205ENST00000548277 HMGN2P05204 90 aaKnown RBP10.58□□□□□ -0.72
TRAFD1-205ENST00000548277 NGFRP08138 427 aa10.58□□□□□ -0.72
TRAFD1-205ENST00000548277 SDC1P18827 310 aa10.58□□□□□ -0.72
TRAFD1-205ENST00000548277 ATP6V1C1P21283 382 aa10.58□□□□□ -0.72
TRAFD1-205ENST00000548277 IGHV1-2P23083 117 aa10.58□□□□□ -0.72
TRAFD1-205ENST00000548277 SLC7A1P30825 629 aa10.58□□□□□ -0.72
TRAFD1-205ENST00000548277 EIF1P41567 113 aaKnown RBP10.58□□□□□ -0.72
TRAFD1-205ENST00000548277 SERPINB4P48594 390 aa10.58□□□□□ -0.72
TRAFD1-205ENST00000548277 P2RX1P51575 399 aa10.58□□□□□ -0.72
TRAFD1-205ENST00000548277 CCR4P51679 360 aa10.58□□□□□ -0.72
TRAFD1-205ENST00000548277 NUDT6P53370 316 aa10.58□□□□□ -0.72
TRAFD1-205ENST00000548277 CDH11P55287 796 aa10.58□□□□□ -0.72
TRAFD1-205ENST00000548277 RPL38P63173 70 aaKnown RBP10.58□□□□□ -0.72
TRAFD1-205ENST00000548277 IRX1P78414 480 aaPredicted RBP10.58□□□□□ -0.72
TRAFD1-205ENST00000548277 RASGEF1BQ0VAM2 473 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms