RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 H7C1C5 153 aa13.65□□□□□ -0.23
HOXC11-202ENST00000546378 MAS1P04201 325 aa13.65□□□□□ -0.23
HOXC11-202ENST00000546378 H2AFB2P0C5Z0 115 aa13.65□□□□□ -0.23
HOXC11-202ENST00000546378 LAMP2P13473 410 aa13.65□□□□□ -0.23
HOXC11-202ENST00000546378 NT5EP21589 574 aa13.65□□□□□ -0.23
HOXC11-202ENST00000546378 SMIM11AP58511 58 aa13.65□□□□□ -0.23
HOXC11-202ENST00000546378 SNRPGP62308 76 aaKnown RBP13.65□□□□□ -0.23
HOXC11-202ENST00000546378 LCN6P62502 163 aa13.65□□□□□ -0.23
HOXC11-202ENST00000546378 CRMP1Q14194 572 aa13.65□□□□□ -0.23
HOXC11-202ENST00000546378 ZNF805Q5CZA5 627 aa13.65□□□□□ -0.23
HOXC11-202ENST00000546378 BICRALQ6AI39 1079 aa13.65□□□□□ -0.23
HOXC11-202ENST00000546378 ELP2Q6IA86 826 aa13.65□□□□□ -0.23
HOXC11-202ENST00000546378 FAM111BQ6SJ93 734 aa13.65□□□□□ -0.23
HOXC11-202ENST00000546378 ADIPOR2Q86V24 386 aa13.65□□□□□ -0.23
HOXC11-202ENST00000546378 OR2T33Q8NG76 320 aa13.65□□□□□ -0.23
HOXC11-202ENST00000546378 DVL3Q92997 716 aaPredicted RBP13.65□□□□□ -0.23
HOXC11-202ENST00000546378 NEURL3Q96EH8 262 aa13.65□□□□□ -0.23
HOXC11-202ENST00000546378 TSSK2Q96PF2 358 aa13.65□□□□□ -0.23
HOXC11-202ENST00000546378 POLDIP3Q9BY77 421 aaKnown RBP13.65□□□□□ -0.23
HOXC11-202ENST00000546378 OR52D1Q9H346 318 aa13.65□□□□□ -0.23
HOXC11-202ENST00000546378 POT1Q9NUX5 634 aa13.65□□□□□ -0.23
HOXC11-202ENST00000546378 RNF13O43567 381 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 PRLHRP49683 370 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 TDGQ13569 410 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 C12orf73Q69YU5 71 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 TEX261Q6UWH6 196 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 KIAA0907Q7Z7F0 614 aaPredicted RBP13.64□□□□□ -0.23
HOXC11-202ENST00000546378 CLDN22Q8N7P3 220 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 OR52E2Q8NGJ4 325 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 CXorf40AQ8TE69 158 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 WNT2BQ93097 391 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 SLC41A3Q96GZ6 507 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 OR7D2Q96RA2 312 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 ARHGAP9Q9BRR9 750 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 SAV1Q9H4B6 383 aaPredicted RBP13.64□□□□□ -0.23
HOXC11-202ENST00000546378 PPP1R3EQ9H7J1 279 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 U3KQ87 197 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 CDHR4A6H8M9 788 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 KCNAB3O43448 404 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 TEAD1P28347 426 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 MPIP34949 423 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 MAP2K6P52564 334 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 DHCR24Q15392 516 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 SSX6Q7RTT6 188 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 PLCZ1Q86YW0 608 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 GALNT6Q8NCL4 622 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 RSPRY1Q96DX4 576 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 CXorf58Q96LI9 332 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 ULBP3Q9BZM4 244 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 ZDHHC5Q9C0B5 715 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 ARL6Q9H0F7 186 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 MARK1Q9P0L2 795 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 ADAM18Q9Y3Q7 739 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 CDH10Q9Y6N8 788 aa13.64□□□□□ -0.23
HOXC11-202ENST00000546378 A0A1W2PR48 441 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 TFP02787 698 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 ASGR2P07307 311 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 IGFBP4P22692 258 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 EDNRAP25101 427 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 CLDN20P56880 219 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 TAS2R38P59533 333 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 RPE65Q16518 533 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 ZNF542PQ5EBM4 170 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 FAM78AQ5JUQ0 283 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 ZBTB37Q5TC79 503 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 ZNF322Q6U7Q0 402 aaPredicted RBP13.63□□□□□ -0.23
HOXC11-202ENST00000546378 THSD4Q6ZMP0 1018 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 Q6ZTK2 550 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 MOSPD2Q8NHP6 518 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 RPLP0P6Q8NHW5 317 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 LGALS14Q8TCE9 139 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 MCCC2Q9HCC0 563 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 IKZF2Q9UKS7 526 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 TRAPPC4Q9Y296 219 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 HELZP42694 1942 aaKnown RBP13.63□□□□□ -0.23
HOXC11-202ENST00000546378 L7N2F9 121 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 CDK2AP1O14519 115 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 EPPINO95925 133 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 LCN1P31025 176 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 RPL35P42766 123 aaKnown RBP13.63□□□□□ -0.23
HOXC11-202ENST00000546378 PER3P56645 1201 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 ST3GAL3Q11203 375 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 RAB40BQ12829 278 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 GALEQ14376 348 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 TRAM2Q15035 370 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 SMAD2Q15796 467 aaKnown RBP13.63□□□□□ -0.23
HOXC11-202ENST00000546378 ACOT4Q8N9L9 421 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 RFKQ969G6 155 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 UBQLN3Q9H347 655 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 SPHK1Q9NYA1 384 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 NPAP1Q9NZP6 1156 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 KCMF1Q9P0J7 381 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 ZNF780BQ9Y6R6 833 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 LOC105371267A0A1B0GV96 52 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 AIFM1O95831 613 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 PVRP15151 417 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 RPL3P39023 403 aaKnown RBP13.63□□□□□ -0.23
HOXC11-202ENST00000546378 RAD52P43351 418 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 MAPK9P45984 424 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 OR4C11Q6IEV9 310 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms