RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 ARHGAP21Q5T5U3 1957 aa6.05□□□□□ -1.44
LDHA-223ENST00000545215 ZNF407Q9C0G0 2248 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 LOC105369274A0A096LPK9 316 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 LOC102723532A0A0G2JNH3 316 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 LCE6AA0A183 80 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.04□□□□□ -1.44
LDHA-223ENST00000545215 HMX3A6NHT5 357 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 ANKDD1BA6NHY2 528 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 FOXE1O00358 373 aaPredicted RBP6.04□□□□□ -1.44
LDHA-223ENST00000545215 OR7A17O14581 309 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 AZIN1O14977 448 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 SNNO75324 88 aaPredicted RBP6.04□□□□□ -1.44
LDHA-223ENST00000545215 SERPINA6P08185 405 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 ZNF10P21506 573 aaPredicted RBP6.04□□□□□ -1.44
LDHA-223ENST00000545215 BGNP21810 368 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 CRYGSP22914 178 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 HMOX2P30519 316 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 MDH1P40925 334 aaKnown RBP6.04□□□□□ -1.44
LDHA-223ENST00000545215 SLC1A6P48664 564 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 EMP2P54851 167 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 CDH13P55290 713 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 STXBP1P61764 594 aaKnown RBP6.04□□□□□ -1.44
LDHA-223ENST00000545215 RGS1Q08116 209 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 LGALS3BPQ08380 585 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 BST1Q10588 318 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 CSTF3Q12996 717 aaKnown RBP6.04□□□□□ -1.44
LDHA-223ENST00000545215 NDUFA9Q16795 377 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 PRTGQ2VWP7 1150 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 C18orf21Q32NC0 220 aaPredicted RBP6.04□□□□□ -1.44
LDHA-223ENST00000545215 BEAN1Q3B7T3 259 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 ZIK1Q3SY52 487 aaPredicted RBP6.04□□□□□ -1.44
LDHA-223ENST00000545215 TMEM35AQ53FP2 167 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 ARL13AQ5H913 290 aaPredicted RBP6.04□□□□□ -1.44
LDHA-223ENST00000545215 WLSQ5T9L3 541 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 FRMPD2BQ6IN97 320 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 FAM180BQ6P0A1 224 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 CRLF3Q8IUI8 442 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.04□□□□□ -1.441e-8■□□□□ 10.4
LDHA-223ENST00000545215 LRRC34Q8IZ02 419 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 OR4N4Q8N0Y3 316 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 CSNK1A1LQ8N752 337 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 MFSD9Q8NBP5 474 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 OR4F6Q8NGB9 312 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 MBD3L2Q8NHZ7 208 aaPredicted RBP6.04□□□□□ -1.44
LDHA-223ENST00000545215 METTL6Q8TCB7 284 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 ZNF418Q8TF45 676 aaPredicted RBP6.04□□□□□ -1.44
LDHA-223ENST00000545215 LZICQ8WZA0 190 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 ZNF75CPQ92670 426 aaPredicted RBP6.04□□□□□ -1.44
LDHA-223ENST00000545215 ESAMQ96AP7 390 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 MSI2Q96DH6 328 aaKnown RBP6.04□□□□□ -1.44
LDHA-223ENST00000545215 NEIL1Q96FI4 390 aaPredicted RBP6.04□□□□□ -1.44
LDHA-223ENST00000545215 CMTM7Q96FZ5 175 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 C10orf90Q96M02 699 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 OR2A5Q96R48 311 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 SIKE1Q9BRV8 207 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 MECRQ9BV79 373 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 ROGDIQ9GZN7 287 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 SLITRK2Q9H156 845 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 NELFAQ9H3P2 528 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 BRF2Q9HAW0 419 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 MID1IP1Q9NPA3 183 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 ABCF3Q9NUQ8 709 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 TUBA8Q9NY65 449 aaPredicted RBP6.04□□□□□ -1.44
LDHA-223ENST00000545215 ZNF226Q9NYT6 803 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 VSX1Q9NZR4 365 aaPredicted RBP6.04□□□□□ -1.44
LDHA-223ENST00000545215 TRPC4Q9UBN4 977 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 ACAD8Q9UKU7 415 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 CDC14AQ9UNH5 594 aa6.04□□□□□ -1.44
LDHA-223ENST00000545215 IGLV3-12A0A075B6K2 115 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 LOC102723996A0A087X1L8 192 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 IGKV1-8A0A0C4DH67 115 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 WDR91A4D1P6 747 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 TRPC5OSA6NMA1 111 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 NPIPB8E9PQR5 432 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 H0YGG7 62 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 C3orf84H3BNL1 204 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 SLC28A1O00337 649 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 HAT1O14929 419 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 SCAMP2O15127 329 aaKnown RBP6.03□□□□□ -1.44
LDHA-223ENST00000545215 POLR3GO15318 223 aaPredicted RBP6.03□□□□□ -1.44
LDHA-223ENST00000545215 GPR42O15529 346 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 DNPH1O43598 174 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 OR1F1O43749 312 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 SEMA3DO95025 777 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 TGDSO95455 350 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 PRB2P02812 416 aaPredicted RBP6.03□□□□□ -1.44
LDHA-223ENST00000545215 FESP07332 822 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 HEXBP07686 556 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 HKR1P10072 659 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 EPORP19235 508 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 GCSHP23434 173 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 RPL14P50914 215 aaKnown RBP6.03□□□□□ -1.44
LDHA-223ENST00000545215 ZNF136P52737 540 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 HILS1P60008 231 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 ARF3P61204 181 aaPredicted RBP6.03□□□□□ -1.44
LDHA-223ENST00000545215 CUL3Q13618 768 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 FAM53BQ14153 422 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 FBXO48Q5FWF7 155 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 RUSC1-AS1Q66K80 236 aa6.03□□□□□ -1.44
LDHA-223ENST00000545215 DEF8Q6ZN54 512 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms