RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 GSX1Q9H4S2 264 aaPredicted RBP4.29□□□□□ -1.72
CNGA1-209ENST00000544810 SEMA4BQ9NPR2 832 aaPredicted RBP4.29□□□□□ -1.72
CNGA1-209ENST00000544810 THSD1Q9NS62 852 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 GRHPRQ9UBQ7 328 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 SLC2A6Q9UGQ3 507 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 MGAT4BQ9UQ53 548 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.29□□□□□ -1.72
CNGA1-209ENST00000544810 CCL27Q9Y4X3 112 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 GON4LQ3T8J9 2241 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 GOLGA4Q13439 2230 aaKnown RBP4.29□□□□□ -1.72
CNGA1-209ENST00000544810 ABCA12Q86UK0 2595 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 PLSCR5A0PG75 271 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 IRGMA1A4Y4 181 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 POM121BA6NF01 834 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 DBX1A6NMT0 343 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 HMSDA8MTL9 139 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 SUPT3HB4E1H0 165 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 J3KR12 359 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 RGS14O43566 566 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 JCHAINP01591 159 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 IGHV2-70P01814 119 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 HEXAP06865 529 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 FBP1P09467 338 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 HIST1H2AGP0C0S8 130 aaPredicted RBP4.29□□□□□ -1.72
CNGA1-209ENST00000544810 FAM87AP0C7U9 286 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 FOLR2P14207 255 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 PRF1P14222 555 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 HIST1H2ADP20671 130 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 PTPN6P29350 595 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 SLC6A4P31645 630 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 ACSL1P33121 698 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 BTCP35070 178 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 CSKP41240 450 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 RFX3P48380 749 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 TIAL1Q01085 375 aaKnown RBP eCLIP4.29□□□□□ -1.72
CNGA1-209ENST00000544810 TPBGQ13641 420 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 IL10RAQ13651 578 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 PMS2P11Q13670 270 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 IL18Q14116 193 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 FGL2Q14314 439 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 GUCA2BQ16661 112 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 FAM174BQ3ZCQ3 159 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 ZNF789Q5FWF6 425 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 HIST2H2AA3Q6FI13 130 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 SLC25A25Q6KCM7 469 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 C17orf107Q6ZR85 190 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 QSOX2Q6ZRP7 698 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 IKBIPQ70UQ0 350 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 GLCCI1Q86VQ1 547 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 TMEM17Q86X19 198 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 PDZD9Q8IXQ8 264 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 LAS2Q8IYD9 372 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 DEFB106AQ8N104 65 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 FAM46DQ8NEK8 389 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 IPMKQ8NFU5 416 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 ASB13Q8WXK3 278 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 MRPL48Q96GC5 212 aaKnown RBP4.29□□□□□ -1.72
CNGA1-209ENST00000544810 ZDHHC12Q96GR4 267 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 HIST1H2AHQ96KK5 128 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 KCNC2Q96PR1 638 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 HIST1H2AJQ99878 128 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 TREX2Q9BQ50 279 aaPredicted RBP4.29□□□□□ -1.72
CNGA1-209ENST00000544810 FICDQ9BVA6 458 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 DUSP23Q9BVJ7 150 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 MS4A7Q9GZW8 240 aaPredicted RBP4.29□□□□□ -1.72
CNGA1-209ENST00000544810 SLC25A32Q9H2D1 315 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 EVA1AQ9H8M9 152 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 ZMAT3Q9HA38 289 aaKnown RBP4.29□□□□□ -1.72
CNGA1-209ENST00000544810 MYEF2Q9P2K5 600 aaKnown RBP4.29□□□□□ -1.72
CNGA1-209ENST00000544810 SEC14L3Q9UDX4 400 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 TCFL5Q9UL49 500 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 SPATA2Q9UM82 520 aa4.29□□□□□ -1.72
CNGA1-209ENST00000544810 RPL36Q9Y3U8 105 aaKnown RBP4.29□□□□□ -1.72
CNGA1-209ENST00000544810 POLR3HQ9Y535 204 aaPredicted RBP4.29□□□□□ -1.72
CNGA1-209ENST00000544810 CEP192Q8TEP8 1941 aa4.28□□□□□ -1.72
CNGA1-209ENST00000544810 OBSL1O75147 1896 aa4.28□□□□□ -1.72
CNGA1-209ENST00000544810 DSPPQ9NZW4 1301 aa4.28□□□□□ -1.72
CNGA1-209ENST00000544810 A0A0G2JPF8 293 aa4.28□□□□□ -1.72
CNGA1-209ENST00000544810 TEX13CA0A0J9YWL9 993 aa4.28□□□□□ -1.72
CNGA1-209ENST00000544810 A0A1B0GTL3 188 aa4.28□□□□□ -1.72
CNGA1-209ENST00000544810 TRDV1A0A1B0GX56 115 aa4.28□□□□□ -1.72
CNGA1-209ENST00000544810 ARGFXA6NJG6 315 aa4.28□□□□□ -1.72
CNGA1-209ENST00000544810 ZNF729A6NN14 1252 aaPredicted RBP4.28□□□□□ -1.72
CNGA1-209ENST00000544810 C2orf74A8MZ97 194 aa4.28□□□□□ -1.72
CNGA1-209ENST00000544810 HNRNPCL3B7ZW38 293 aa4.28□□□□□ -1.72
CNGA1-209ENST00000544810 NPIPB8E9PQR5 432 aa4.28□□□□□ -1.72
CNGA1-209ENST00000544810 TEX46H3BTG2 121 aa4.28□□□□□ -1.72
CNGA1-209ENST00000544810 E2F3O00716 465 aa4.28□□□□□ -1.72
CNGA1-209ENST00000544810 SGCEO43556 437 aa4.28□□□□□ -1.72
CNGA1-209ENST00000544810 AP2A2O94973 939 aa4.28□□□□□ -1.72
CNGA1-209ENST00000544810 ZNF682O95780 498 aa4.28□□□□□ -1.72
CNGA1-209ENST00000544810 HPP00738 406 aa4.28□□□□□ -1.72
CNGA1-209ENST00000544810 ITGB2P05107 769 aa4.28□□□□□ -1.72
CNGA1-209ENST00000544810 ACAA1P09110 424 aaPredicted RBP4.28□□□□□ -1.72
CNGA1-209ENST00000544810 GIPP09681 153 aaPredicted RBP4.28□□□□□ -1.72
CNGA1-209ENST00000544810 HNRNPCL4P0DMR1 293 aa4.28□□□□□ -1.72
CNGA1-209ENST00000544810 CPN1P15169 458 aa4.28□□□□□ -1.72
CNGA1-209ENST00000544810 PPP3CBP16298 524 aa4.28□□□□□ -1.72
CNGA1-209ENST00000544810 GPX2P18283 190 aa4.28□□□□□ -1.72
CNGA1-209ENST00000544810 PAX6P26367 422 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms