RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 ARG2P78540 354 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 CNIH2Q6PI25 160 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 PRR18Q8N4B5 295 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 ATOH1Q92858 354 aaPredicted RBP11.99□□□□□ -0.49
CHD4-211ENST00000544484 HLA-CQ95604 372 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 BTBD2Q9BX70 525 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 HHATLQ9HCP6 504 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 PLEKHM1Q9Y4G2 1056 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 B3GALT4O96024 378 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 PET100P0DJ07 73 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 SLCO4C1Q6ZQN7 724 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 OR4F15Q8NGB8 312 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 ADAMTS19Q8TE59 1207 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 C4orf36Q96KX1 117 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 DPCDQ9BVM2 203 aaPredicted RBP11.99□□□□□ -0.49
CHD4-211ENST00000544484 ZNF576Q9H609 170 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 CDH20Q9HBT6 801 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 STK11Q15831 433 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 C1QTNF2Q9BXJ5 285 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 INIPQ9NRY2 104 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 B3GNT3Q9Y2A9 372 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 ZNF175Q9Y473 711 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 A0A0A6YYH2 397 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 A6NJ64 397 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 HMGA1P17096 107 aaKnown RBP11.99□□□□□ -0.49
CHD4-211ENST00000544484 GDF1P27539 372 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 PCGF3Q3KNV8 242 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 PLEKHN1Q494U1 663 aaPredicted RBP11.99□□□□□ -0.49
CHD4-211ENST00000544484 SCGB1C1Q8TD33 95 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 DHCR7Q9UBM7 475 aaKnown RBP11.99□□□□□ -0.49
CHD4-211ENST00000544484 TRBV4-1A0A0J9YWV2 114 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 A0A1B0GV50 99 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 H0YIV9 168 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 CACNG3O60359 315 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 CPOXP36551 454 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 DAP3P51398 398 aaKnown RBP11.98□□□□□ -0.49
CHD4-211ENST00000544484 FXYD4P59646 89 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 SNRPD2P62316 118 aaKnown RBP11.98□□□□□ -0.49
CHD4-211ENST00000544484 EMX1Q04741 257 aaPredicted RBP11.98□□□□□ -0.49
CHD4-211ENST00000544484 ACSM3Q53FZ2 586 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 NKAIN2Q5VXU1 208 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 B3GLCTQ6Y288 498 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 TMEM64Q6YI46 380 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 LINC01465Q8N7H1 131 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 OR51T1Q8NGJ9 327 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 GPR148Q8TDV2 347 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 TOMM40LQ969M1 308 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 INTS14Q96SY0 518 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 CPPED1Q9BRF8 314 aaPredicted RBP11.98□□□□□ -0.49
CHD4-211ENST00000544484 DNTTIP1Q9H147 329 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 SLC39A1Q9NY26 324 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 TAS2R3Q9NYW6 316 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 BTAF1O14981 1849 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 KDM4EB2RXH2 506 aaPredicted RBP11.98□□□□□ -0.49
CHD4-211ENST00000544484 KNG1P01042 644 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 IL7P13232 177 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 MFSD9Q8NBP5 474 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 SPTSSAQ969W0 71 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 NXPE3Q969Y0 559 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 ARAFP10398 606 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 CSNK2A1P68400 391 aaPredicted RBP11.98□□□□□ -0.49
CHD4-211ENST00000544484 EFR3AQ14156 821 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 B3GNT8Q7Z7M8 397 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 CSNK2A3Q8NEV1 391 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 OR5H2Q8NGV7 314 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 TBC1D15Q8TC07 691 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 DUSP23Q9BVJ7 150 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 ACTR6Q9GZN1 396 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 GPN2Q9H9Y4 310 aaPredicted RBP11.98□□□□□ -0.49
CHD4-211ENST00000544484 UBQLN4Q9NRR5 601 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 SH3BGRL2Q9UJC5 107 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 HMX3A6NHT5 357 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 FOXE1O00358 373 aaPredicted RBP11.98□□□□□ -0.49
CHD4-211ENST00000544484 NUDT21O43809 227 aaKnown RBP11.98□□□□□ -0.49
CHD4-211ENST00000544484 BMP4P12644 408 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 PTGS2P35354 604 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 GPR18Q14330 331 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 ZNF750Q32MQ0 723 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 ANKRD54Q6NXT1 300 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 RAB11FIP2Q7L804 512 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 OLIG3Q7RTU3 272 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 MAVSQ7Z434 540 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 SLC38A5Q8WUX1 472 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 CDK1P06493 297 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 PRSS3P35030 304 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 TDGQ13569 410 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 C9orf135Q5VTT2 229 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 RCBTB1Q8NDN9 531 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 SGCZQ96LD1 299 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 ZNF285Q96NJ3 590 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 MCOLN1Q9GZU1 580 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 ACSS1Q9NUB1 689 aaPredicted RBP11.98□□□□□ -0.49
CHD4-211ENST00000544484 B3GALT1Q9Y5Z6 326 aa11.98□□□□□ -0.49
CHD4-211ENST00000544484 IGLV3-10A0A075B6K4 115 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 NSG1A0A0A6YYJ2 146 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 BORCS7-ASMTA0A0B4J1R7 106 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 SSX5O60225 188 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 RGS6P49758 472 aa11.97□□□□□ -0.49
CHD4-211ENST00000544484 RBM39Q14498 530 aaKnown RBP11.97□□□□□ -0.49
CHD4-211ENST00000544484 P2RY14Q15391 338 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms