RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 TMCO5AQ8N6Q1 288 aa11.73□□□□□ -0.53
RTN3-213ENST00000543552 ZNF614Q8N883 585 aa11.73□□□□□ -0.53
RTN3-213ENST00000543552 STEAP2Q8NFT2 490 aa11.73□□□□□ -0.53
RTN3-213ENST00000543552 POC1BQ8TC44 478 aa11.73□□□□□ -0.53
RTN3-213ENST00000543552 RNF128Q8TEB7 428 aa11.73□□□□□ -0.53
RTN3-213ENST00000543552 MARK4Q96L34 752 aa11.73□□□□□ -0.53
RTN3-213ENST00000543552 MRGPRX4Q96LA9 322 aa11.73□□□□□ -0.53
RTN3-213ENST00000543552 C3orf30Q96M34 536 aa11.73□□□□□ -0.53
RTN3-213ENST00000543552 USB1Q9BQ65 265 aaKnown RBP11.73□□□□□ -0.53
RTN3-213ENST00000543552 HDHD5Q9BXW7 423 aa11.73□□□□□ -0.53
RTN3-213ENST00000543552 ACTR6Q9GZN1 396 aa11.73□□□□□ -0.53
RTN3-213ENST00000543552 ZNF395Q9H8N7 513 aaPredicted RBP11.73□□□□□ -0.53
RTN3-213ENST00000543552 GPATCH2Q9NW75 528 aa11.73□□□□□ -0.53
RTN3-213ENST00000543552 ASIC5Q9NY37 505 aa11.73□□□□□ -0.53
RTN3-213ENST00000543552 ZDHHC2Q9UIJ5 367 aa11.73□□□□□ -0.53
RTN3-213ENST00000543552 ICAM5Q9UMF0 924 aa11.73□□□□□ -0.53
RTN3-213ENST00000543552 PCDHGB4Q9UN71 923 aa11.73□□□□□ -0.53
RTN3-213ENST00000543552 CARD8Q9Y2G2 431 aa11.73□□□□□ -0.53
RTN3-213ENST00000543552 DTNAQ9Y4J8 743 aa11.73□□□□□ -0.53
RTN3-213ENST00000543552 NSD1Q96L73 2696 aaPredicted RBP11.73□□□□□ -0.53
RTN3-213ENST00000543552 NAV3Q8IVL0 2385 aa11.72□□□□□ -0.53
RTN3-213ENST00000543552 PCNX3Q9H6A9 2034 aa11.72□□□□□ -0.53
RTN3-213ENST00000543552 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.72□□□□□ -0.53
RTN3-213ENST00000543552 ZNF264O43296 627 aa11.72□□□□□ -0.53
RTN3-213ENST00000543552 EIF4E2O60573 245 aaKnown RBP11.72□□□□□ -0.53
RTN3-213ENST00000543552 AGR2O95994 175 aa11.72□□□□□ -0.53
RTN3-213ENST00000543552 OPN1LWP04000 364 aa11.72□□□□□ -0.53
RTN3-213ENST00000543552 G6PDP11413 515 aa11.72□□□□□ -0.53
RTN3-213ENST00000543552 CLDN8P56748 225 aa11.72□□□□□ -0.53
RTN3-213ENST00000543552 EMX2Q04743 252 aa11.72□□□□□ -0.53
RTN3-213ENST00000543552 PGS1Q32NB8 556 aa11.72□□□□□ -0.53
RTN3-213ENST00000543552 PLEKHM3Q6ZWE6 761 aa11.72□□□□□ -0.53
RTN3-213ENST00000543552 KRTCAP2Q8N6L1 136 aa11.72□□□□□ -0.53
RTN3-213ENST00000543552 VPS37AQ8NEZ2 397 aa11.72□□□□□ -0.53
RTN3-213ENST00000543552 OR5W2Q8NH69 310 aa11.72□□□□□ -0.53
RTN3-213ENST00000543552 FBXO27Q8NI29 283 aa11.72□□□□□ -0.53
RTN3-213ENST00000543552 ZFP90Q8TF47 636 aa11.72□□□□□ -0.53
RTN3-213ENST00000543552 AENQ8WTP8 325 aaKnown RBP11.72□□□□□ -0.53
RTN3-213ENST00000543552 OIT3Q8WWZ8 545 aa11.72□□□□□ -0.53
RTN3-213ENST00000543552 HS3ST6Q96QI5 342 aa11.72□□□□□ -0.53
RTN3-213ENST00000543552 OR7D2Q96RA2 312 aa11.72□□□□□ -0.53
RTN3-213ENST00000543552 BDH2Q9BUT1 245 aa11.72□□□□□ -0.53
RTN3-213ENST00000543552 TMEM109Q9BVC6 243 aa11.72□□□□□ -0.53
RTN3-213ENST00000543552 NMUR2Q9GZQ4 415 aa11.72□□□□□ -0.53
RTN3-213ENST00000543552 C12orf49Q9H741 205 aa11.72□□□□□ -0.53
RTN3-213ENST00000543552 NGBQ9NPG2 151 aa11.72□□□□□ -0.53
RTN3-213ENST00000543552 EXD2Q9NVH0 621 aa11.72□□□□□ -0.53
RTN3-213ENST00000543552 KLHL13Q9P2N7 655 aa11.72□□□□□ -0.53
RTN3-213ENST00000543552 RNF103-CHMP3A0A140T963 221 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 NPIPB9F8W1W9 429 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 RNASET2O00584 256 aaKnown RBP11.71□□□□□ -0.53
RTN3-213ENST00000543552 ZNF195O14628 629 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 BIRC5O15392 142 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 TYROBPO43914 113 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 STX11O75558 287 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 PRKD3O94806 890 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 SERPINE1P05121 402 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 MYZAPP0CAP1 466 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 PRKCAP17252 672 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 HOXB4P17483 251 aaPredicted RBP11.71□□□□□ -0.53
RTN3-213ENST00000543552 CCR4P51679 360 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 HBA1P69905 142 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 KRT71Q3SY84 523 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 ATAD3BQ5T9A4 648 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 C3orf33Q6P1S2 294 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 WDR93Q6P2C0 686 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 CBLN3Q6UW01 205 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 CLEC9AQ6UXN8 241 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 ZNF704Q6ZNC4 412 aaPredicted RBP11.71□□□□□ -0.53
RTN3-213ENST00000543552 FCRLAQ7L513 359 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 C16orf62Q7Z3J2 963 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 WFDC8Q8IUA0 241 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 KRTAP1-3Q8IUG1 177 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 OR5AK3PQ8NH89 298 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 TMEM171Q8WVE6 324 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 ARSGQ96EG1 525 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 PERPQ96FX8 193 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 SLC35G5Q96KT7 338 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 NPAS1Q99742 590 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 GSX2Q9BZM3 304 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 GSX1Q9H4S2 264 aaPredicted RBP11.71□□□□□ -0.53
RTN3-213ENST00000543552 CXorf56Q9H5V9 222 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 SERINC1Q9NRX5 453 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 KLHL9Q9P2J3 617 aa11.71□□□□□ -0.53
RTN3-213ENST00000543552 ABCA2Q9BZC7 2435 aa11.7□□□□□ -0.54
RTN3-213ENST00000543552 ARID1AO14497 2285 aa11.7□□□□□ -0.54
RTN3-213ENST00000543552 NPIPA5A0A0B4J1W7 369 aa11.7□□□□□ -0.54
RTN3-213ENST00000543552 SERINC4A6NH21 518 aa11.7□□□□□ -0.54
RTN3-213ENST00000543552 NPIPA7E9PJI5 369 aa11.7□□□□□ -0.54
RTN3-213ENST00000543552 TM9SF1O15321 606 aa11.7□□□□□ -0.54
RTN3-213ENST00000543552 RGS16O15492 202 aaPredicted RBP11.7□□□□□ -0.54
RTN3-213ENST00000543552 THBDP07204 575 aa11.7□□□□□ -0.54
RTN3-213ENST00000543552 YES1P07947 543 aa11.7□□□□□ -0.54
RTN3-213ENST00000543552 NPIPA8P0DM63 369 aa11.7□□□□□ -0.54
RTN3-213ENST00000543552 MATN1P21941 496 aa11.7□□□□□ -0.54
RTN3-213ENST00000543552 IL32P24001 234 aa11.7□□□□□ -0.54
RTN3-213ENST00000543552 ARRB2P32121 409 aa11.7□□□□□ -0.54
RTN3-213ENST00000543552 ETV4P43268 484 aa11.7□□□□□ -0.54
RTN3-213ENST00000543552 LTBQ06643 244 aa11.7□□□□□ -0.54
RTN3-213ENST00000543552 P2RY6Q15077 328 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms