RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	CD300C	Q08708	224 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	TRAF3	Q13114	568 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	SLC13A2	Q13183	592 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	TNK1	Q13470	666 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	IL18R1	Q13478	541 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	KRR1	Q13601	381 aa	Known RBP	5.86	□□□□□ -1.47
CIT-213	ENST00000543324	DAG1	Q14118	895 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	DOC2B	Q14184	412 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	SF3B4	Q15427	424 aa	Known RBP eCLIP	5.86	□□□□□ -1.47
CIT-213	ENST00000543324	CTF1	Q16619	201 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	MAPKAPK3	Q16644	382 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	HIST2H2AC	Q16777	129 aa	Predicted RBP	5.86	□□□□□ -1.47
CIT-213	ENST00000543324	DGUOK	Q16854	277 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	FAM83E	Q2M2I3	478 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	ZNF181	Q2M3W8	571 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	GGTA1P	Q4G0N0	100 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	TIGD2	Q4W5G0	525 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	AGK	Q53H12	422 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	ATAD3B	Q5T9A4	648 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	TTC23	Q5W5X9	447 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	NXN	Q6DKJ4	435 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	OR4C11	Q6IEV9	310 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	HSDL2	Q6YN16	418 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	GOLGA7	Q7Z5G4	137 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	THAP5	Q7Z6K1	395 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	AKAP14	Q86UN6	197 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	CCDC71	Q8IV32	467 aa	Predicted RBP	5.86	□□□□□ -1.47
CIT-213	ENST00000543324	SLC7A5P1	Q8MH63	180 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	SPART	Q8N0X7	666 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	C7orf57	Q8NEG2	295 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	OR2M7	Q8NG81	312 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	OR7G1	Q8NGA0	311 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	OR6Q1	Q8NGQ2	317 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	CYGB	Q8WWM9	190 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	DAZL	Q92904	295 aa	Known RBP	5.86	□□□□□ -1.47
CIT-213	ENST00000543324	AURKB	Q96GD4	344 aa	Predicted RBP	5.86	□□□□□ -1.47
CIT-213	ENST00000543324	MED30	Q96HR3	178 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	FBXL20	Q96IG2	436 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	SCYL1	Q96KG9	808 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	SNX18	Q96RF0	628 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	ARPC5L	Q9BPX5	153 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	MRPL57	Q9BQC6	102 aa	Known RBP	5.86	□□□□□ -1.47
CIT-213	ENST00000543324	TRMO	Q9BU70	441 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	NTMT1	Q9BV86	223 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	FUNDC2	Q9BWH2	189 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	SORBS1	Q9BX66	1292 aa	Known RBP	5.86	□□□□□ -1.47
CIT-213	ENST00000543324	ALOXE3	Q9BYJ1	711 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	OR51B5	Q9H339	312 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	PROK2	Q9HC23	129 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	EML4	Q9HC35	981 aa	Known RBP	5.86	□□□□□ -1.47
CIT-213	ENST00000543324	PNO1	Q9NRX1	252 aa	Known RBP	5.86	□□□□□ -1.47
CIT-213	ENST00000543324	MS4A12	Q9NXJ0	267 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	USE1	Q9NZ43	259 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	CRNN	Q9UBG3	495 aa	Predicted RBP	5.86	□□□□□ -1.47
CIT-213	ENST00000543324	PCTP	Q9UKL6	214 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	OAZ3	Q9UMX2	235 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	NPIPA1	Q9UND3	350 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	CARD8	Q9Y2G2	431 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	ATG4B	Q9Y4P1	393 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	PCDHGA11	Q9Y5H2	935 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	COL7A1	Q02388	2944 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	MED12L	Q86YW9	2145 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	PCNX3	Q9H6A9	2034 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324		A0A1B0GTH9	108 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324		A0A1W2PR48	441 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	LRRC3C	A6NJW4	275 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324		A8MVJ9	347 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	EVPLL	A8MZ36	301 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	C17orf105	B2RV13	164 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	RNF223	E7ERA6	249 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	FXYD1	O00168	92 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	HRK	O00198	91 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	STX16	O14662	325 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	PRRG2	O14669	202 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	ARPC2	O15144	300 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	NDUFB5	O43674	189 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	HS6ST1	O60243	411 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	PRKRA	O75569	313 aa	Known RBP	5.85	□□□□□ -1.47
CIT-213	ENST00000543324	KRT75	O95678	551 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	PTTG1	O95997	202 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	CHEK2	O96017	543 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	TGFB1	P01137	390 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	NPPA	P01160	153 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	S100B	P04271	92 aa	Predicted RBP	5.85	□□□□□ -1.47
CIT-213	ENST00000543324	FBXO45	P0C2W1	286 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	CCDC159	P0C7I6	412 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	CCL3	P10147	92 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	HOXB6	P17509	224 aa	Known RBP	5.85	□□□□□ -1.47
CIT-213	ENST00000543324	ENDOU	P21128	410 aa	Known RBP	5.85	□□□□□ -1.47
CIT-213	ENST00000543324	PCMT1	P22061	227 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	GPX3	P22352	226 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	SSR2	P43308	183 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	PIK3CG	P48736	1102 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	RAD23A	P54725	363 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	NAGLU	P54802	743 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	TPTE	P56180	551 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	SLC37A1	P57057	533 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	STX1B	P61266	288 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	IFITM3	Q01628	133 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	MVK	Q03426	396 aa		5.85	□□□□□ -1.47

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