RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 SFXN4Q6P4A7 337 aa14.26□□□□□ -0.13
CNOT9-208ENST00000542068 ZC3H14Q6PJT7 736 aaKnown RBP14.26□□□□□ -0.13
CNOT9-208ENST00000542068 CD200R1LQ6Q8B3 271 aa14.26□□□□□ -0.13
CNOT9-208ENST00000542068 OR2A1Q8NGT9 310 aa14.26□□□□□ -0.13
CNOT9-208ENST00000542068 GRHL3Q8TE85 626 aa14.26□□□□□ -0.13
CNOT9-208ENST00000542068 HSD17B8Q92506 261 aa14.26□□□□□ -0.13
CNOT9-208ENST00000542068 CREB3L1Q96BA8 519 aa14.26□□□□□ -0.13
CNOT9-208ENST00000542068 KCNJ15Q99712 375 aa14.26□□□□□ -0.13
CNOT9-208ENST00000542068 PLA2G2FQ9BZM2 168 aa14.26□□□□□ -0.13
CNOT9-208ENST00000542068 BRD7Q9NPI1 651 aa14.26□□□□□ -0.13
CNOT9-208ENST00000542068 TMEM5Q9Y2B1 443 aa14.26□□□□□ -0.13
CNOT9-208ENST00000542068 TRAV27A0A087WT01 109 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 LRIT2A6NDA9 550 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 SLC19A2O60779 497 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 FZD7O75084 574 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 NDUFV2P19404 249 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 NOS3P29474 1203 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 ZNF658BQ4V348 819 aaPredicted RBP14.25□□□□□ -0.13
CNOT9-208ENST00000542068 ZBTB37Q5TC79 503 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 POGLUT1Q8NBL1 392 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 ZNF485Q8NCK3 441 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 DIO2Q92813 273 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 C4orf36Q96KX1 117 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 PINK1Q9BXM7 581 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 CRISPLD2Q9H0B8 497 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 ACSS1Q9NUB1 689 aaPredicted RBP14.25□□□□□ -0.13
CNOT9-208ENST00000542068 C20orf141Q9NUB4 165 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 NLGN3Q9NZ94 848 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 SLC27A6Q9Y2P4 619 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 POM121BA6NF01 834 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 LRRC72A6NJI9 287 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 MAN2B1O00754 1011 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 PER3P56645 1201 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 C19orf57Q0VDD7 668 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 FGL2Q14314 439 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 BHLHB9Q6PI77 547 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 CD300LDQ6UXZ3 194 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 TRILQ7L0X0 811 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 KIAA0907Q7Z7F0 614 aaPredicted RBP14.25□□□□□ -0.13
CNOT9-208ENST00000542068 OR5M3Q8NGP4 307 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 ZNF671Q8TAW3 534 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 KCNN2Q9H2S1 579 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 OR52D1Q9H346 318 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 USP36Q9P275 1121 aaKnown RBP14.25□□□□□ -0.13
CNOT9-208ENST00000542068 URB1O60287 2271 aaKnown RBP14.25□□□□□ -0.13
CNOT9-208ENST00000542068 ZIC2O95409 532 aaPredicted RBP14.25□□□□□ -0.13
CNOT9-208ENST00000542068 TCRBP04435 133 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 CSNK2A2P19784 350 aaPredicted RBP14.25□□□□□ -0.13
CNOT9-208ENST00000542068 HTR1FP30939 366 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 SUZ12Q15022 739 aaKnown RBP14.25□□□□□ -0.13
CNOT9-208ENST00000542068 DUSP6Q16828 381 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 TP53I3Q53FA7 332 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 ZNF620Q6ZNG0 422 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 ZC3HAV1LQ96H79 300 aaKnown RBP14.25□□□□□ -0.13
CNOT9-208ENST00000542068 DPAGT1Q9H3H5 408 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 POLMQ9NP87 494 aaPredicted RBP14.25□□□□□ -0.13
CNOT9-208ENST00000542068 CD93Q9NPY3 652 aa14.25□□□□□ -0.13
CNOT9-208ENST00000542068 AK6Q9Y3D8 172 aaKnown RBP14.25□□□□□ -0.13
CNOT9-208ENST00000542068 ARHGEF17Q96PE2 2063 aaPredicted RBP14.24□□□□□ -0.13
CNOT9-208ENST00000542068 IGKV1-8A0A0C4DH67 115 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 A0A0G2JPF8 293 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 HNRNPCL2B2RXH8 293 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 HNRNPCL3B7ZW38 293 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 SGK494L7N484 410 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 CACNB4O00305 520 aaPredicted RBP14.24□□□□□ -0.13
CNOT9-208ENST00000542068 HNRNPCL4P0DMR1 293 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 PTHLHP12272 177 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 ANXA3P12429 323 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 PVRP15151 417 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 POLR2CP19387 275 aaPredicted RBP14.24□□□□□ -0.13
CNOT9-208ENST00000542068 HIST1H1TP22492 207 aaPredicted RBP14.24□□□□□ -0.13
CNOT9-208ENST00000542068 AHCYP23526 432 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 PBX2P40425 430 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 MAGEB1P43366 347 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 SNRPNP63162 240 aaKnown RBP14.24□□□□□ -0.13
CNOT9-208ENST00000542068 PRR5P85299 388 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 DPTQ07507 201 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 TEX261Q6UWH6 196 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 COMMD7Q86VX2 200 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 IL17RCQ8NAC3 791 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 FANK1Q8TC84 345 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 ACOT11Q8WXI4 607 aaPredicted RBP14.24□□□□□ -0.13
CNOT9-208ENST00000542068 SLC17A9Q9BYT1 436 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 FOLH1BQ9HBA9 442 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 FGF22Q9HCT0 170 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 STARD5Q9NSY2 213 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 OR6C2Q9NZP2 312 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 NFKBIL1Q9UBC1 381 aaPredicted RBP14.24□□□□□ -0.13
CNOT9-208ENST00000542068 U3KQ87 197 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 A0A1W2PPV9 198 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 TSPAN4O14817 238 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 HLA-DQB1P01920 261 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 PDGFAP04085 211 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 BMP7P18075 431 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 REEP5Q00765 189 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 PLA1AQ53H76 456 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 AGBL4Q5VU57 503 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 METAP1DQ6UB28 335 aaPredicted RBP14.24□□□□□ -0.13
CNOT9-208ENST00000542068 NUDT18Q6ZVK8 323 aa14.24□□□□□ -0.13
CNOT9-208ENST00000542068 ZNF687Q8N1G0 1237 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms