RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 IGLON5A6NGN9 336 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 ASB14A6NK59 587 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 C11orf98E9PRG8 122 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 NPIPB9F8W1W9 429 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 K7EQD1 137 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 B4GALT2O60909 372 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 FRAT2O75474 233 aaPredicted RBP3.54□□□□□ -1.84
SNHG1-217ENST00000541578 WBP4O75554 376 aaKnown RBP3.54□□□□□ -1.84
SNHG1-217ENST00000541578 CLDN1O95832 211 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 CHRNA1P02708 482 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 OR9G9P0C7N8 305 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 RNF224P0DH78 156 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 CASQ1P31415 396 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 TDO2P48775 406 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 VEGFCP49767 419 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 PPT1P50897 306 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 TFDP1Q14186 410 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 CAMK4Q16566 473 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 CDKN3Q16667 212 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 UPP1Q16831 310 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 KNOP1Q1ED39 458 aaKnown RBP3.54□□□□□ -1.84
SNHG1-217ENST00000541578 CNPY1Q3B7I2 92 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 MUC21Q5SSG8 566 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 RHBDD2Q6NTF9 364 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 PNCKQ6P2M8 343 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 KCNIP4Q6PIL6 250 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 TRIM65Q6PJ69 517 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 FRRS1Q6ZNA5 592 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 KIAA1328Q86T90 577 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 KCNMB4Q86W47 210 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 UBE2J2Q8N2K1 259 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 NECAB1Q8N987 351 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 FAM133AQ8N9E0 248 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 OR4F17Q8NGA8 305 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 OR4F5Q8NH21 305 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 FAM76AQ8TAV0 307 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 ZNF519Q8TB69 540 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 OSTF1Q92882 214 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 ART4Q93070 314 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 CNRIP1Q96F85 164 aaPredicted RBP3.54□□□□□ -1.84
SNHG1-217ENST00000541578 LRR1Q96L50 414 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 FAM218AQ96MZ4 157 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 AGAP4Q96P64 663 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 OR4F4Q96R69 305 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 ZNF300Q96RE9 604 aaPredicted RBP3.54□□□□□ -1.84
SNHG1-217ENST00000541578 SECISBP2Q96T21 854 aaKnown RBP3.54□□□□□ -1.84
SNHG1-217ENST00000541578 GPR174Q9BXC1 333 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 BARHL1Q9BZE3 327 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 PKIBQ9C010 78 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 CALHM2Q9HA72 323 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 APMAPQ9HDC9 416 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 C2orf42Q9NWW7 574 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 THEGQ9P2T0 379 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 LCMT1Q9UIC8 334 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 BDP1A6H8Y1 2624 aa3.54□□□□□ -1.84
SNHG1-217ENST00000541578 GRIN2DO15399 1336 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 METTL21EPA6NDL7 271 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 ZSCAN5CA6NGD5 496 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-217ENST00000541578 FBLL1A6NHQ2 334 aaKnown RBP3.53□□□□□ -1.84
SNHG1-217ENST00000541578 FAM74A7A6NL05 159 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 TRAFD1O14545 582 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-217ENST00000541578 ZNF749O43361 778 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 OR1F1O43749 312 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 DUX1O43812 170 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 LRATO95237 230 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 FCGR3AP08637 254 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 UCP1P25874 307 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 MAT2AP31153 395 aaKnown RBP3.53□□□□□ -1.84
SNHG1-217ENST00000541578 PTGER3P43115 390 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 GNPDA1P46926 289 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 ACTR3P61158 418 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 ERVK11-1P61568 191 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 UBE2HP62256 183 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 BDH1Q02338 343 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 TRDNQ13061 729 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 CUL2Q13617 745 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 RAB35Q15286 201 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 UBE2V2Q15819 145 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 TMEM30BQ3MIR4 351 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 FAM74A3Q4VXF1 159 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 TMEM31Q5JXX7 168 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 FAM53AQ6NSI3 398 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-217ENST00000541578 LEG1Q6P5S2 330 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 BHLHB9Q6PI77 547 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 ATRAIDQ6UW56 229 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 Q6ZPB1 254 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-217ENST00000541578 ERICH1Q86X53 443 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 CATSPERDQ86XM0 798 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 APLFQ8IW19 511 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-217ENST00000541578 ANKFN1Q8N957 763 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 ZSCAN4Q8NAM6 433 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-217ENST00000541578 NFAM1Q8NET5 270 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-217ENST00000541578 OR2T6Q8NHC8 308 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 LRRC15Q8TF66 581 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 RNF139Q8WU17 664 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 MAIP1Q8WWC4 291 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 SLCO2A1Q92959 643 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 DLX4Q92988 240 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-217ENST00000541578 BIRC7Q96CA5 298 aa3.53□□□□□ -1.84
SNHG1-217ENST00000541578 ATXN7L3BQ96GX2 97 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms