RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 GIMAP4Q9NUV9 329 aa8.2□□□□□ -1.1
YBX3-211ENST00000541351 PLEK2Q9NYT0 353 aa8.2□□□□□ -1.1
YBX3-211ENST00000541351 CD274Q9NZQ7 290 aa8.2□□□□□ -1.1
YBX3-211ENST00000541351 MALT1Q9UDY8 824 aa8.2□□□□□ -1.1
YBX3-211ENST00000541351 DCTN4Q9UJW0 460 aa8.2□□□□□ -1.1
YBX3-211ENST00000541351 A0A1W2PRB8 838 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 A0A1W2PS29 197 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 TCRBV7S2A1N4TA0A589 114 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 CLPSL1A2RUU4 121 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 PPIHO43447 177 aaKnown RBP8.19□□□□□ -1.1
YBX3-211ENST00000541351 GMFGO60234 142 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 CYTIPO60759 359 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 PRAMEF4O60810 478 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 NGFP01138 241 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 ALOX5P09917 674 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 HPGDP15428 266 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 ATP4BP51164 291 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 MAPK12P53778 367 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 RAG2P55895 527 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 MRPS35P82673 323 aaKnown RBP8.19□□□□□ -1.1
YBX3-211ENST00000541351 ZNF155Q12901 538 aaPredicted RBP8.19□□□□□ -1.1
YBX3-211ENST00000541351 C18orf21Q32NC0 220 aaPredicted RBP8.19□□□□□ -1.1
YBX3-211ENST00000541351 PLPPR5Q32ZL2 321 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 CCNYL2Q5T2Q4 361 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 PRAMEF9Q5VWM5 478 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 LIPJQ5W064 366 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 DRICH1Q6PGQ1 229 aaPredicted RBP8.19□□□□□ -1.1
YBX3-211ENST00000541351 VHLLQ6RSH7 139 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 RHOUQ7L0Q8 258 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 SPATA21Q7Z572 469 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 RETREG3Q86VR2 466 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 CNTN4Q8IWV2 1026 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 NUP37Q8NFH4 326 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 TRPC4APQ8TEL6 797 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 TRIM44Q96DX7 344 aaPredicted RBP8.19□□□□□ -1.1
YBX3-211ENST00000541351 TMEM79Q9BSE2 394 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 NAT9Q9BTE0 207 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 C1QTNF5Q9BXJ0 243 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 SRXN1Q9BYN0 137 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 CD244Q9BZW8 370 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 TRIM5Q9C035 493 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 ZNF665Q9H7R5 613 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 CXorf36Q9H7Y0 433 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 TCF7L1Q9HCS4 588 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 SLC17A5Q9NRA2 495 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 MED17Q9NVC6 651 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 OPTCQ9UBM4 332 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 UPB1Q9UBR1 384 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 ZDHHC2Q9UIJ5 367 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 ZKSCAN5Q9Y2L8 839 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 NOSIPQ9Y314 301 aaKnown RBP8.19□□□□□ -1.1
YBX3-211ENST00000541351 PCDHA9Q9Y5H5 950 aa8.19□□□□□ -1.1
YBX3-211ENST00000541351 TTC36A6NLP5 189 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 C17orf51A8MQB3 221 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 CBFA2T2O43439 604 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 FRS3O43559 492 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 PLPP2O43688 288 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 MFAP3LO75121 409 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 MRPL33O75394 65 aaKnown RBP8.18□□□□□ -1.1
YBX3-211ENST00000541351 KCNH1O95259 989 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 FSHBP01225 129 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 CSF1P09603 554 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 PGAM1P18669 254 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 OMGP23515 440 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 PSMA4P25789 261 aaKnown RBP8.18□□□□□ -1.1
YBX3-211ENST00000541351 MAGEA6P43360 314 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 SLC12A2P55011 1212 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 LMO4P61968 165 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 SLC9A3R2Q15599 337 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 TMEM176BQ3YBM2 270 aaPredicted RBP8.18□□□□□ -1.1
YBX3-211ENST00000541351 MMEL1Q495T6 779 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 FAM205BPQ63HN1 556 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 NPSR1Q6W5P4 371 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 GSPT2Q8IYD1 628 aaKnown RBP8.18□□□□□ -1.1
YBX3-211ENST00000541351 CCDC170Q8IYT3 715 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 RIBC1Q8N443 379 aaPredicted RBP8.18□□□□□ -1.1
YBX3-211ENST00000541351 MAIP1Q8WWC4 291 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 CKAP2Q8WWK9 683 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 SLC9A6Q92581 669 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 ZHX1-C8orf76Q96EF9 292 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 SLC38A2Q96QD8 506 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 SHCBP1LQ9BZQ2 653 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 MS4A7Q9GZW8 240 aaPredicted RBP8.18□□□□□ -1.1
YBX3-211ENST00000541351 GRPEL1Q9HAV7 217 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 PPANQ9NQ55 473 aaKnown RBP8.18□□□□□ -1.1
YBX3-211ENST00000541351 NECAP2Q9NVZ3 263 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 PARPBPQ9NWS1 579 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 IFNKQ9P0W0 207 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 NFU1Q9UMS0 254 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 ANGPTL3Q9Y5C1 460 aa8.18□□□□□ -1.1
YBX3-211ENST00000541351 SH3PXD2BA1X283 911 aa8.17□□□□□ -1.1
YBX3-211ENST00000541351 G3V4G9 280 aa8.17□□□□□ -1.1
YBX3-211ENST00000541351 H0YIV9 168 aa8.17□□□□□ -1.1
YBX3-211ENST00000541351 M0R233 179 aa8.17□□□□□ -1.1
YBX3-211ENST00000541351 TAPBPO15533 448 aa8.17□□□□□ -1.1
YBX3-211ENST00000541351 PLOD3O60568 738 aa8.17□□□□□ -1.1
YBX3-211ENST00000541351 UGDHO60701 494 aa8.17□□□□□ -1.1
YBX3-211ENST00000541351 SEC14L2O76054 403 aa8.17□□□□□ -1.1
YBX3-211ENST00000541351 NDUFA7O95182 113 aa8.17□□□□□ -1.1
YBX3-211ENST00000541351 UTS2O95399 124 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms