RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 TMEM81Q6P7N7 255 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 FKBP9P1Q75LS8 142 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 TSPYL5Q86VY4 417 aaPredicted RBP8.52□□□□□ -1.05
DDX55-208ENST00000541259 CARM1Q86X55 608 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 FAM71CQ8NEG0 241 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 OR6T1Q8NGN1 323 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 PYDC1Q8WXC3 89 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 LZICQ8WZA0 190 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 PROX1Q92786 737 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 ZNF524Q96C55 264 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 SLC47A1Q96FL8 570 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 ABHD17AQ96GS6 310 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 RSRC1Q96IZ7 334 aaKnown RBP8.52□□□□□ -1.05
DDX55-208ENST00000541259 C7orf34Q96L11 122 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 RNF145Q96MT1 663 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 CNTNAP3BQ96NU0 1288 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 SECISBP2Q96T21 854 aaKnown RBP8.52□□□□□ -1.05
DDX55-208ENST00000541259 ARHGDIGQ99819 225 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 OSBPL11Q9BXB4 747 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 CNTNAP3Q9BZ76 1288 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 AMBRA1Q9C0C7 1298 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 RNF32Q9H0A6 362 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.52□□□□□ -1.05
DDX55-208ENST00000541259 CACYBPQ9HB71 228 aaKnown RBP8.52□□□□□ -1.05
DDX55-208ENST00000541259 TIMMDC1Q9NPL8 285 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 SACM1LQ9NTJ5 587 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 CNIH4Q9P003 139 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 MED11Q9P086 117 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 ANAPC2Q9UJX6 822 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 BAG5Q9UL15 447 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 AURKCQ9UQB9 309 aa8.52□□□□□ -1.05
DDX55-208ENST00000541259 PCDHGA9Q9Y5G4 932 aaKnown RBP8.52□□□□□ -1.05
DDX55-208ENST00000541259 USP24Q9UPU5 2620 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 ANKRD33BA6NCL7 494 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 MKRN2OSH3BPM6 223 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 J3KTA2 159 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 hCG_2039718K7EN88 272 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 SYT5O00445 386 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 AP3D1O14617 1153 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 GNB5O14775 395 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 ZNF264O43296 627 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 HCRTR2O43614 444 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 SEMA7AO75326 666 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 TRIM3O75382 744 aaPredicted RBP8.51□□□□□ -1.05
DDX55-208ENST00000541259 DIRAS1O95057 198 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 ITGB2P05107 769 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 FAM87AP0C7U9 286 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 UMPSP11172 480 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 UBL4AP11441 157 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 CNR1P21554 472 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 FUT4P22083 530 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 RYKP34925 604 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 ACAA2P42765 397 aaKnown RBP8.51□□□□□ -1.05
DDX55-208ENST00000541259 YAP1P46937 504 aaKnown RBP8.51□□□□□ -1.05
DDX55-208ENST00000541259 ZNF136P52737 540 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 RPP38P78345 283 aaKnown RBP8.51□□□□□ -1.05
DDX55-208ENST00000541259 VLDLRP98155 873 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 FOXK2Q01167 660 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 C17orf67Q0P5P2 114 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 KCNAB2Q13303 367 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 SNTA1Q13424 505 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 TOMM34Q15785 309 aaPredicted RBP8.51□□□□□ -1.05
DDX55-208ENST00000541259 IQCCQ4KMZ1 466 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 EIPR1Q53HC9 387 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 ZNF766Q5HY98 468 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 SLC25A25Q6KCM7 469 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 SLC30A6Q6NXT4 461 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 GALNTL5Q7Z4T8 443 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 GRAMD2AQ8IUY3 354 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 SULF2Q8IWU5 870 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 CMIPQ8IY22 773 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 WDSUB1Q8N9V3 476 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 OR2M3Q8NG83 312 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 RASSF5Q8WWW0 418 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 OIT3Q8WWZ8 545 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 SCMH1Q96GD3 660 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 JSRP1Q96MG2 331 aaPredicted RBP8.51□□□□□ -1.05
DDX55-208ENST00000541259 FRMD6Q96NE9 622 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 UGT2B28Q9BY64 529 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 LAT2Q9GZY6 243 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 DSN1Q9H410 356 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 CTPS2Q9NRF8 586 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 CCM2LQ9NUG4 571 aaPredicted RBP8.51□□□□□ -1.05
DDX55-208ENST00000541259 TUBA8Q9NY65 449 aaPredicted RBP8.51□□□□□ -1.05
DDX55-208ENST00000541259 PPP4R1LQ9P1A2 415 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 SLC13A4Q9UKG4 626 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 ICAM5Q9UMF0 924 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 TP53TG5Q9Y2B4 290 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 SLC35A3Q9Y2D2 325 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 RRP15Q9Y3B9 282 aaKnown RBP8.51□□□□□ -1.05
DDX55-208ENST00000541259 WIF1Q9Y5W5 379 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 SVILO95425 2214 aa8.51□□□□□ -1.05
DDX55-208ENST00000541259 GTF3C1Q12789 2109 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 H3BNH8 94 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 H3BNX3 289 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 PEX1O43933 1283 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 NME2P1O60361 137 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 CDC40O60508 579 aaKnown RBP eCLIP8.5□□□□□ -1.05
DDX55-208ENST00000541259 EIF4E2O60573 245 aaKnown RBP8.5□□□□□ -1.05
DDX55-208ENST00000541259 FKBP6O75344 327 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms