RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 RPS4Y1P22090 263 aaKnown RBP11.81□□□□□ -0.52
LTBR-208ENST00000541005 CTSSP25774 331 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 ADH6P28332 368 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 PGM1P36871 562 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 SUCLG1P53597 346 aaKnown RBP11.81□□□□□ -0.52
LTBR-208ENST00000541005 CLDN20P56880 219 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 MAPK14Q16539 360 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 CTU2Q2VPK5 515 aaKnown RBP11.81□□□□□ -0.52
LTBR-208ENST00000541005 GTDC1Q4AE62 458 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 SLC25A53Q5H9E4 307 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 C6orf10Q5SRN2 563 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 LRRC74BQ6ZQY2 392 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 OLIG3Q7RTU3 272 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 ZNF614Q8N883 585 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 ANKFN1Q8N957 763 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 OR5W2Q8NH69 310 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 RFWD2Q8NHY2 731 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 POC1BQ8TC44 478 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 PNPT1Q8TCS8 783 aaKnown RBP11.81□□□□□ -0.52
LTBR-208ENST00000541005 GPR119Q8TDV5 335 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 SPDL1Q96EA4 605 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 ADGRG7Q96K78 797 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 RNF145Q96MT1 663 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 NPAS1Q99742 590 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 SFXN3Q9BWM7 321 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 SLC38A1Q9H2H9 487 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 RUBCNLQ9H714 662 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 THUMPD1Q9NXG2 353 aaKnown RBP11.81□□□□□ -0.52
LTBR-208ENST00000541005 CCDC167Q9P0B6 97 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 DCTN4Q9UJW0 460 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 TRIM33Q9UPN9 1127 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 SLC35A3Q9Y2D2 325 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 CARD8Q9Y2G2 431 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 PCDHB14Q9Y5E9 798 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 GPC6Q9Y625 555 aaPredicted RBP11.81□□□□□ -0.52
LTBR-208ENST00000541005 DSPPQ9NZW4 1301 aa11.81□□□□□ -0.52
LTBR-208ENST00000541005 TRBV5-3A0A0A0MS03 114 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 AGAP5A6NIR3 686 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 SHISA8B8ZZ34 492 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 GTPBP1O00178 669 aaKnown RBP11.8□□□□□ -0.52
LTBR-208ENST00000541005 NR5A2O00482 541 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 ADAMDEC1O15204 470 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 ANP32DO95626 131 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 TGM6O95932 706 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 CHRM4P08173 479 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 TMIGD3P0DMS9 266 aaPredicted RBP11.8□□□□□ -0.52
LTBR-208ENST00000541005 BMP2P12643 396 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 PRKCAP17252 672 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 CAPN3P20807 821 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 OPRM1P35372 400 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 ASCL1P50553 236 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 DLX5P56178 289 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 RPS3AP61247 264 aaKnown RBP11.8□□□□□ -0.52
LTBR-208ENST00000541005 RAC1P63000 192 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 EEF1A1P68104 462 aaKnown RBP11.8□□□□□ -0.52
LTBR-208ENST00000541005 CHRNEQ04844 493 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 FOXF1Q12946 379 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 FADDQ13158 208 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 MAPK11Q15759 364 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 NDUFAF6Q330K2 333 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 GPAT3Q53EU6 434 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 EEF1A1P5Q5VTE0 462 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 METTL21CQ5VZV1 264 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 SLC2A7Q6PXP3 512 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 EIF3MQ7L2H7 374 aaKnown RBP11.8□□□□□ -0.52
LTBR-208ENST00000541005 GRAMD2AQ8IUY3 354 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 CMIPQ8IY22 773 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 UBQLNLQ8IYU4 475 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 AURKBQ96GD4 344 aaPredicted RBP11.8□□□□□ -0.52
LTBR-208ENST00000541005 MRGPRX4Q96LA9 322 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 TRIM8Q9BZR9 551 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 RAD21L1Q9H4I0 556 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 EXOSC3Q9NQT5 275 aaKnown RBP11.8□□□□□ -0.52
LTBR-208ENST00000541005 PAQR5Q9NXK6 330 aaPredicted RBP11.8□□□□□ -0.52
LTBR-208ENST00000541005 JKAMPQ9P055 326 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 P2RX2Q9UBL9 471 aa11.8□□□□□ -0.52
LTBR-208ENST00000541005 ANKRD17O75179 2603 aaKnown RBP11.79□□□□□ -0.52
LTBR-208ENST00000541005 CREBBPQ92793 2442 aa11.79□□□□□ -0.52
LTBR-208ENST00000541005 SPG11Q96JI7 2443 aa11.79□□□□□ -0.52
LTBR-208ENST00000541005 DCHS2Q6V1P9 2916 aa11.79□□□□□ -0.52
LTBR-208ENST00000541005 AKAP6Q13023 2319 aa11.79□□□□□ -0.52
LTBR-208ENST00000541005 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.79□□□□□ -0.52
LTBR-208ENST00000541005 A0A0G2JND7 137 aa11.79□□□□□ -0.52
LTBR-208ENST00000541005 A0A1W2PP18 115 aa11.79□□□□□ -0.52
LTBR-208ENST00000541005 SLC22A20A6NK97 555 aa11.79□□□□□ -0.52
LTBR-208ENST00000541005 H0YC42 278 aa11.79□□□□□ -0.52
LTBR-208ENST00000541005 SEC14L5O43304 696 aa11.79□□□□□ -0.52
LTBR-208ENST00000541005 CSTAP01040 98 aa11.79□□□□□ -0.52
LTBR-208ENST00000541005 CRHP06850 196 aa11.79□□□□□ -0.52
LTBR-208ENST00000541005 TFPTP0C1Z6 253 aa11.79□□□□□ -0.52
LTBR-208ENST00000541005 NR2F1P10589 423 aa11.79□□□□□ -0.52
LTBR-208ENST00000541005 FCGR2AP12318 317 aa11.79□□□□□ -0.52
LTBR-208ENST00000541005 ETFAP13804 333 aa11.79□□□□□ -0.52
LTBR-208ENST00000541005 BMP5P22003 454 aa11.79□□□□□ -0.52
LTBR-208ENST00000541005 RNF144AP50876 292 aaPredicted RBP11.79□□□□□ -0.52
LTBR-208ENST00000541005 TPD52P55327 224 aaPredicted RBP11.79□□□□□ -0.52
LTBR-208ENST00000541005 DSTNP60981 165 aa11.79□□□□□ -0.52
LTBR-208ENST00000541005 PLAURQ03405 335 aa11.79□□□□□ -0.52
LTBR-208ENST00000541005 CBFBQ13951 182 aa11.79□□□□□ -0.52
LTBR-208ENST00000541005 SYPL1Q16563 259 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms