RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	HORMAD2	Q8N7B1	307 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	OR4F15	Q8NGB8	312 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	OR2L8	Q8NGY9	312 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	MR1	Q95460	341 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	COX14	Q96I36	57 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PLA2G12A	Q9BZM1	189 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ABCG5	Q9H222	651 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	REEP4	Q9H6H4	257 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	EGLN3	Q9H6Z9	239 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	IL21R	Q9HBE5	538 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	KCND3	Q9UK17	655 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SH2B3	Q9UQQ2	575 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ANGPT4	Q9Y264	503 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	GBF1	Q92538	1859 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	CKAP5	Q14008	2032 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783		A0A1W2PR77	199 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	RNASET2	O00584	256 aa	Known RBP	5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PROM1	O43490	865 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	B3GALT2	O43825	422 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ADA	P00813	363 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	IFNA14	P01570	189 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	H1F0	P07305	194 aa	Known RBP	5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	CD82	P27701	267 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ASMT	P46597	345 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	VSX2	P58304	361 aa	Predicted RBP	5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	DSTN	P60981	165 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	BTN1A1	Q13410	526 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ARHGAP40	Q5TG30	622 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	TMEM71	Q6P5X7	295 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PODNL1	Q6PEZ8	512 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	C11orf96	Q7Z7L8	435 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	COMTD1	Q86VU5	262 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ZNF740	Q8NDX6	193 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	OR5K2	Q8NHB8	316 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	NEIL3	Q8TAT5	605 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SLC38A5	Q8WUX1	472 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	CHTF18	Q8WVB6	975 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SLC5A11	Q8WWX8	675 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	UFD1	Q92890	307 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	NEIL2	Q969S2	332 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	TMEM19	Q96HH6	336 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PELI2	Q9HAT8	420 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	MIEF1	Q9NQG6	463 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	NKIRAS2	Q9NYR9	191 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	RABL2A	Q9UBK7	228 aa	Predicted RBP	5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	TAC3	Q9UHF0	121 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ATP6V1H	Q9UI12	483 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SLC13A4	Q9UKG4	626 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ELF5	Q9UKW6	265 aa	Predicted RBP	5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SF3B6	Q9Y3B4	125 aa	Known RBP	5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	RTCA	O00442	366 aa	Known RBP	5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	TOX3	O15405	576 aa	Predicted RBP	5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	LGI1	O95970	557 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	IL3	P08700	152 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	NTS	P30990	170 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	GIPR	P48546	466 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	METAP1	P53582	386 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	HSD11B2	P80365	405 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	TAGLN	Q01995	201 aa	Known RBP	5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	NHLH1	Q02575	133 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	CRYZ	Q08257	329 aa	Known RBP	5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ZSWIM7	Q19AV6	140 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ZNF630	Q2M218	657 aa	Predicted RBP	5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	C12orf73	Q69YU5	71 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	TMEM91	Q6ZNR0	172 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	RAB11FIP2	Q7L804	512 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ZER1	Q7Z7L7	766 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	OR52E1	Q8NGJ3	308 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	TMEM163	Q8TC26	289 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	C11orf24	Q96F05	449 aa	Predicted RBP	5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	FCRL1	Q96LA6	429 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	IP6K3	Q96PC2	410 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	FCRL4	Q96PJ5	515 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	TBX5	Q99593	518 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PELO	Q9BRX2	385 aa	Known RBP	5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	RNF32	Q9H0A6	362 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	CXorf36	Q9H7Y0	433 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	CAPN10	Q9HC96	672 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ZFP64	Q9NPA5	681 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PHF11	Q9UIL8	331 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	NXT1	Q9UKK6	140 aa	Known RBP	5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	NUP50	Q9UKX7	468 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	DIMT1	Q9UNQ2	313 aa	Known RBP	5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PCDHGB7	Q9Y5F8	929 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SDK1	Q7Z5N4	2213 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	DSPP	Q9NZW4	1301 aa		5.27	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	TRIM77	I1YAP6	450 aa		5.27	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	MPC2	O95563	127 aa		5.27	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	RAF1	P04049	648 aa		5.27	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	MMP11	P24347	488 aa		5.27	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	ATP6V1E1	P36543	226 aa		5.27	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	UCN	P55089	124 aa		5.27	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	HSPB3	Q12988	150 aa		5.27	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	EXOSC2	Q13868	293 aa	Known RBP	5.27	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	GALE	Q14376	348 aa		5.27	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	MFSD13A	Q14CX5	517 aa		5.27	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	AANAT	Q16613	207 aa		5.27	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	FAM27D1	Q5T7N8	215 aa		5.27	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	LIPJ	Q5W064	366 aa		5.27	□□□□□ -1.57
RAPGEF4-215	ENST00000540783	REEP3	Q6NUK4	255 aa		5.27	□□□□□ -1.57

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