RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 SIMC1Q8NDZ2 872 aa9.39□□□□□ -0.91
SPARC-209ENST00000539687 ANKK1Q8NFD2 765 aa9.39□□□□□ -0.91
SPARC-209ENST00000539687 TBC1D15Q8TC07 691 aa9.39□□□□□ -0.91
SPARC-209ENST00000539687 RNF217Q8TC41 542 aa9.39□□□□□ -0.91
SPARC-209ENST00000539687 SAP25Q8TEE9 199 aa9.39□□□□□ -0.91
SPARC-209ENST00000539687 ZNF501Q96CX3 271 aaPredicted RBP9.39□□□□□ -0.91
SPARC-209ENST00000539687 BPIFA2Q96DR5 249 aa9.39□□□□□ -0.91
SPARC-209ENST00000539687 HSPBAP1Q96EW2 488 aa9.39□□□□□ -0.91
SPARC-209ENST00000539687 SENP5Q96HI0 755 aaPredicted RBP9.39□□□□□ -0.91
SPARC-209ENST00000539687 ZC3H10Q96K80 434 aaKnown RBP9.39□□□□□ -0.91
SPARC-209ENST00000539687 MGLLQ99685 303 aa9.39□□□□□ -0.91
SPARC-209ENST00000539687 RHNO1Q9BSD3 238 aa9.39□□□□□ -0.91
SPARC-209ENST00000539687 ZNF426Q9BUY5 554 aa9.39□□□□□ -0.91
SPARC-209ENST00000539687 JAM3Q9BX67 310 aa9.39□□□□□ -0.91
SPARC-209ENST00000539687 EGLN3Q9H6Z9 239 aa9.39□□□□□ -0.91
SPARC-209ENST00000539687 CAPN10Q9HC96 672 aa9.39□□□□□ -0.91
SPARC-209ENST00000539687 AMBNQ9NP70 447 aa9.39□□□□□ -0.91
SPARC-209ENST00000539687 INPP5EQ9NRR6 644 aa9.39□□□□□ -0.91
SPARC-209ENST00000539687 SIDT1Q9NXL6 827 aaKnown RBP9.39□□□□□ -0.91
SPARC-209ENST00000539687 DNAJC27Q9NZQ0 273 aa9.39□□□□□ -0.91
SPARC-209ENST00000539687 CNIH4Q9P003 139 aa9.39□□□□□ -0.91
SPARC-209ENST00000539687 CCDC59Q9P031 241 aaKnown RBP9.39□□□□□ -0.91
SPARC-209ENST00000539687 MUTYHQ9UIF7 546 aa9.39□□□□□ -0.91
SPARC-209ENST00000539687 KCNE5Q9UJ90 142 aa9.39□□□□□ -0.91
SPARC-209ENST00000539687 FBXO4Q9UKT5 387 aa9.39□□□□□ -0.91
SPARC-209ENST00000539687 RARRES3Q9UL19 164 aa9.39□□□□□ -0.91
SPARC-209ENST00000539687 CEP192Q8TEP8 1941 aa9.39□□□□□ -0.91
SPARC-209ENST00000539687 WDFY4Q6ZS81 3184 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 A0A1B0GWA3 101 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 A0A1W2PQD3 144 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 CLDN25C9JDP6 229 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 TGFBR3LH3BV60 316 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 M0R082 166 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 TO15178 435 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 LYPD3O95274 346 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 PTHP01270 115 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 SYPP08247 313 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 SAGP10523 405 aaPredicted RBP9.38□□□□□ -0.91
SPARC-209ENST00000539687 TDGF1P13385 188 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 FOLR1P15328 257 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 PAICSP22234 425 aaKnown RBP9.38□□□□□ -0.91
SPARC-209ENST00000539687 PSMA1P25786 263 aaKnown RBP9.38□□□□□ -0.91
SPARC-209ENST00000539687 SOX6P35712 828 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 GPR4P46093 362 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 SLC37A1P57057 533 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 DMWDQ09019 674 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 TRA2AQ13595 282 aaKnown RBP eCLIP9.38□□□□□ -0.91
SPARC-209ENST00000539687 KCNAB1Q14722 419 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 SPCS2Q15005 226 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 PLK5Q496M5 336 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 SNAP47Q5SQN1 464 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 ACSM5Q6NUN0 579 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 ARHGAP11AQ6P4F7 1023 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 NPSR1Q6W5P4 371 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 RTL4Q6ZR62 310 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 KANSL1Q7Z3B3 1105 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 NUP54Q7Z3B4 507 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 LNX2Q8N448 690 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 METTL27Q8N6F8 245 aaPredicted RBP9.38□□□□□ -0.91
SPARC-209ENST00000539687 IQCF1Q8N6M8 205 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 NANOGP1Q8N7R0 232 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 PTPMT1Q8WUK0 201 aaPredicted RBP9.38□□□□□ -0.91
SPARC-209ENST00000539687 FGF11Q92914 225 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 RNFT2Q96EX2 444 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 GPA33Q99795 319 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 COQ7Q99807 217 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 MMP27Q9H306 513 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 OR52D1Q9H346 318 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 PNO1Q9NRX1 252 aaKnown RBP9.38□□□□□ -0.91
SPARC-209ENST00000539687 WDR70Q9NW82 654 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 B3GNT3Q9Y2A9 372 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 PCDHGB6Q9Y5F9 930 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 MAU2Q9Y6X3 613 aa9.38□□□□□ -0.91
SPARC-209ENST00000539687 IGLV3-12A0A075B6K2 115 aa9.37□□□□□ -0.91
SPARC-209ENST00000539687 NPIPA5A0A0B4J1W7 369 aa9.37□□□□□ -0.91
SPARC-209ENST00000539687 CENPVL1A0A0U1RR11 272 aa9.37□□□□□ -0.91
SPARC-209ENST00000539687 SLC22A31A6NKX4 558 aa9.37□□□□□ -0.91
SPARC-209ENST00000539687 RIIAD1A6NNX1 92 aa9.37□□□□□ -0.91
SPARC-209ENST00000539687 NPIPA7E9PJI5 369 aa9.37□□□□□ -0.91
SPARC-209ENST00000539687 ONECUT2O95948 504 aa9.37□□□□□ -0.91
SPARC-209ENST00000539687 THY1P04216 161 aa9.37□□□□□ -0.91
SPARC-209ENST00000539687 IGKV3-11P04433 115 aa9.37□□□□□ -0.91
SPARC-209ENST00000539687 GKN3PP0CG01 181 aa9.37□□□□□ -0.91
SPARC-209ENST00000539687 HSMCR30P0CW71 290 aa9.37□□□□□ -0.91
SPARC-209ENST00000539687 NPIPA8P0DM63 369 aa9.37□□□□□ -0.91
SPARC-209ENST00000539687 UBL4AP11441 157 aa9.37□□□□□ -0.91
SPARC-209ENST00000539687 ZNF3P17036 446 aa9.37□□□□□ -0.91
SPARC-209ENST00000539687 TBXA2RP21731 343 aa9.37□□□□□ -0.91
SPARC-209ENST00000539687 IL12BP29460 328 aa9.37□□□□□ -0.91
SPARC-209ENST00000539687 LIPAP38571 399 aa9.37□□□□□ -0.91
SPARC-209ENST00000539687 ACAA2P42765 397 aaKnown RBP9.37□□□□□ -0.91
SPARC-209ENST00000539687 OR1D4P47884 311 aa9.37□□□□□ -0.91
SPARC-209ENST00000539687 WNT4P56705 351 aa9.37□□□□□ -0.91
SPARC-209ENST00000539687 HOXC5Q00444 222 aa9.37□□□□□ -0.91
SPARC-209ENST00000539687 CFHR1Q03591 330 aa9.37□□□□□ -0.91
SPARC-209ENST00000539687 POU4F2Q12837 409 aa9.37□□□□□ -0.91
SPARC-209ENST00000539687 AQP6Q13520 282 aa9.37□□□□□ -0.91
SPARC-209ENST00000539687 ERV3-1Q14264 604 aa9.37□□□□□ -0.91
SPARC-209ENST00000539687 NSDHLQ15738 373 aa9.37□□□□□ -0.91
SPARC-209ENST00000539687 HLA-BQ31612 363 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms