RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 FIGLAQ6QHK4 219 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 LYPD4Q6UWN0 246 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 ESPNLQ6ZVH7 1005 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 SLC37A3Q8NCC5 494 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 TMEM239Q8WW34 195 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 KISS1RQ969F8 398 aaPredicted RBP13.04□□□□□ -0.32
UBE3B-210ENST00000539599 MOAP1Q96BY2 351 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 DNAJA3Q96EY1 480 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 FRMD6Q96NE9 622 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 ZNF559Q9BR84 538 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 MTHFD2LQ9H903 347 aaPredicted RBP13.04□□□□□ -0.32
UBE3B-210ENST00000539599 ALG5Q9Y673 324 aa13.04□□□□□ -0.32
UBE3B-210ENST00000539599 ARID1BQ8NFD5 2236 aaPredicted RBP13.04□□□□□ -0.32
UBE3B-210ENST00000539599 SNTNA6NMZ2 147 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 RNF13O43567 381 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 AKAP8O43823 692 aaKnown RBP13.03□□□□□ -0.32
UBE3B-210ENST00000539599 IGHA1P01876 353 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 TYRP1P17643 537 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 SRP9P49458 86 aaKnown RBP13.03□□□□□ -0.32
UBE3B-210ENST00000539599 EMDP50402 254 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 OR12D2P58182 307 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 CRMP1Q14194 572 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 RDH10Q8IZV5 341 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 SRFBP1Q8NEF9 429 aaKnown RBP13.03□□□□□ -0.32
UBE3B-210ENST00000539599 RFKQ969G6 155 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 DEPDC7Q96QD5 511 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 GALNT9Q9HCQ5 603 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 KLHL1Q9NR64 748 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 OR6C2Q9NZP2 312 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 EXTL2Q9UBQ6 330 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 ZNF223Q9UK11 482 aaPredicted RBP13.03□□□□□ -0.32
UBE3B-210ENST00000539599 A0A087WV48 116 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 GPR89AB7ZAQ6 455 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 J3QLW9 94 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 PSMD9O00233 223 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 BHLHE40O14503 412 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 SERPINI2O75830 405 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 OR5F1O95221 314 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 EIF4EP06730 217 aaKnown RBP13.03□□□□□ -0.32
UBE3B-210ENST00000539599 GPR89BP0CG08 455 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 ZNF19P17023 458 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 PAICSP22234 425 aaKnown RBP13.03□□□□□ -0.32
UBE3B-210ENST00000539599 FGF9P31371 208 aaPredicted RBP13.03□□□□□ -0.32
UBE3B-210ENST00000539599 IFNA8P32881 189 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 MAP2K3P46734 347 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 SLC25A35Q3KQZ1 300 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 ARHGAP11BQ3KRB8 267 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 CCDC92Q53HC0 331 aaPredicted RBP13.03□□□□□ -0.32
UBE3B-210ENST00000539599 LCN1P1Q5VSP4 162 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 GDPD1Q8N9F7 314 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 C19orf18Q8NEA5 215 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 DNAJA4Q8WW22 397 aaPredicted RBP13.03□□□□□ -0.32
UBE3B-210ENST00000539599 RNF170Q96K19 258 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 LYARQ9NX58 379 aaKnown RBP13.03□□□□□ -0.32
UBE3B-210ENST00000539599 ZMIZ1Q9ULJ6 1067 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 DTX4Q9Y2E6 619 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 SLCO1B1Q9Y6L6 691 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 CACNA1CQ13936 2221 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 A0A1W2PRG6 482 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 OR6C70A6NIJ9 312 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 B3GALT2O43825 422 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 LYPD3O95274 346 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 MAGEB1P43366 347 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 EVX1P49640 407 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 VSX2P58304 361 aaPredicted RBP13.03□□□□□ -0.32
UBE3B-210ENST00000539599 RPS15AP62244 130 aaKnown RBP13.03□□□□□ -0.32
UBE3B-210ENST00000539599 C1orf61Q13536 156 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 QPRTQ15274 297 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 OR5J2Q8NH18 312 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 C4orf36Q96KX1 117 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 ACTR10Q9NZ32 417 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 NLGN3Q9NZ94 848 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 PILRAQ9UKJ1 303 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 ZNF346Q9UL40 294 aaKnown RBP13.03□□□□□ -0.32
UBE3B-210ENST00000539599 EXOGQ9Y2C4 368 aaKnown RBP13.03□□□□□ -0.32
UBE3B-210ENST00000539599 FRYLO94915 3013 aa13.03□□□□□ -0.32
UBE3B-210ENST00000539599 TICRRQ7Z2Z1 1910 aa13.02□□□□□ -0.32
UBE3B-210ENST00000539599 DAPL1A0PJW8 107 aa13.02□□□□□ -0.32
UBE3B-210ENST00000539599 HMX3A6NHT5 357 aa13.02□□□□□ -0.32
UBE3B-210ENST00000539599 PLOD3O60568 738 aa13.02□□□□□ -0.32
UBE3B-210ENST00000539599 RDH16O75452 317 aa13.02□□□□□ -0.32
UBE3B-210ENST00000539599 HLA-DPB1P04440 258 aa13.02□□□□□ -0.32
UBE3B-210ENST00000539599 NTSR1P30989 418 aa13.02□□□□□ -0.32
UBE3B-210ENST00000539599 DDOSTP39656 456 aa13.02□□□□□ -0.32
UBE3B-210ENST00000539599 FOXK2Q01167 660 aa13.02□□□□□ -0.32
UBE3B-210ENST00000539599 DUSP8Q13202 625 aa13.02□□□□□ -0.32
UBE3B-210ENST00000539599 SUZ12Q15022 739 aaKnown RBP13.02□□□□□ -0.32
UBE3B-210ENST00000539599 METTL27Q8N6F8 245 aaPredicted RBP13.02□□□□□ -0.32
UBE3B-210ENST00000539599 LRRC17Q8N6Y2 441 aa13.02□□□□□ -0.32
UBE3B-210ENST00000539599 YIPF7Q8N8F6 280 aa13.02□□□□□ -0.32
UBE3B-210ENST00000539599 ZNRF4Q8WWF5 429 aa13.02□□□□□ -0.32
UBE3B-210ENST00000539599 BPIFA2Q96DR5 249 aa13.02□□□□□ -0.32
UBE3B-210ENST00000539599 SIPA1Q96FS4 1042 aa13.02□□□□□ -0.32
UBE3B-210ENST00000539599 TNFRSF13CQ96RJ3 184 aa13.02□□□□□ -0.32
UBE3B-210ENST00000539599 CD180Q99467 661 aa13.02□□□□□ -0.32
UBE3B-210ENST00000539599 MED18Q9BUE0 208 aa13.02□□□□□ -0.32
UBE3B-210ENST00000539599 SARGQ9BW04 601 aa13.02□□□□□ -0.32
UBE3B-210ENST00000539599 ZNF350Q9GZX5 532 aa13.02□□□□□ -0.32
UBE3B-210ENST00000539599 CALML5Q9NZT1 146 aa13.02□□□□□ -0.32
UBE3B-210ENST00000539599 FLRT3Q9NZU0 649 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms