RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 SLC1A6P48664 564 aa19.87■□□□□ 0.77
SCARB1-206ENST00000539320 NDUFAF6Q330K2 333 aa19.87■□□□□ 0.77
SCARB1-206ENST00000539320 LILRA2Q8N149 483 aa19.87■□□□□ 0.77
SCARB1-206ENST00000539320 SORT1Q99523 831 aa19.87■□□□□ 0.77
SCARB1-206ENST00000539320 DPY30Q9C005 99 aa19.87■□□□□ 0.77
SCARB1-206ENST00000539320 KLHL4Q9C0H6 718 aa19.87■□□□□ 0.77
SCARB1-206ENST00000539320 C20orf27Q9GZN8 174 aa19.87■□□□□ 0.77
SCARB1-206ENST00000539320 RAB21Q9UL25 225 aa19.87■□□□□ 0.77
SCARB1-206ENST00000539320 DTNAQ9Y4J8 743 aa19.87■□□□□ 0.77
SCARB1-206ENST00000539320 GPC6Q9Y625 555 aaPredicted RBP19.87■□□□□ 0.77
SCARB1-206ENST00000539320 ARID1AO14497 2285 aa19.86■□□□□ 0.77
SCARB1-206ENST00000539320 GTPBP1O00178 669 aaKnown RBP19.86■□□□□ 0.77
SCARB1-206ENST00000539320 MATN1P21941 496 aa19.86■□□□□ 0.77
SCARB1-206ENST00000539320 ADH6P28332 368 aa19.86■□□□□ 0.77
SCARB1-206ENST00000539320 RPL14P50914 215 aaKnown RBP19.86■□□□□ 0.77
SCARB1-206ENST00000539320 ZNF239Q16600 458 aaKnown RBP19.86■□□□□ 0.77
SCARB1-206ENST00000539320 TNFAIP8L3Q5GJ75 292 aa19.86■□□□□ 0.77
SCARB1-206ENST00000539320 C6orf120Q7Z4R8 191 aa19.86■□□□□ 0.77
SCARB1-206ENST00000539320 TMCO5AQ8N6Q1 288 aa19.86■□□□□ 0.77
SCARB1-206ENST00000539320 OR8J2Q8NGG1 315 aa19.86■□□□□ 0.77
SCARB1-206ENST00000539320 OR4A15Q8NGL6 344 aa19.86■□□□□ 0.77
SCARB1-206ENST00000539320 FBXO27Q8NI29 283 aa19.86■□□□□ 0.77
SCARB1-206ENST00000539320 OSTF1Q92882 214 aa19.86■□□□□ 0.77
SCARB1-206ENST00000539320 PIK3IP1Q96FE7 263 aa19.86■□□□□ 0.77
SCARB1-206ENST00000539320 ZC3HAV1LQ96H79 300 aaKnown RBP19.86■□□□□ 0.77
SCARB1-206ENST00000539320 SDF2Q99470 211 aa19.86■□□□□ 0.77
SCARB1-206ENST00000539320 NMUR2Q9GZQ4 415 aa19.86■□□□□ 0.77
SCARB1-206ENST00000539320 PLSCR4Q9NRQ2 329 aa19.86■□□□□ 0.77
SCARB1-206ENST00000539320 BEX4Q9NWD9 120 aaPredicted RBP19.86■□□□□ 0.77
SCARB1-206ENST00000539320 HAO1Q9UJM8 370 aa19.86■□□□□ 0.77
SCARB1-206ENST00000539320 DUXAA6NLW8 204 aa19.85■□□□□ 0.77
SCARB1-206ENST00000539320 GJE1A6NN92 205 aa19.85■□□□□ 0.77
SCARB1-206ENST00000539320 UBL4AP11441 157 aa19.85■□□□□ 0.77
SCARB1-206ENST00000539320 AGTR1P30556 359 aa19.85■□□□□ 0.77
SCARB1-206ENST00000539320 CCR4P51679 360 aa19.85■□□□□ 0.77
SCARB1-206ENST00000539320 ADAM8P78325 824 aa19.85■□□□□ 0.77
SCARB1-206ENST00000539320 CLEC4FQ8N1N0 589 aa19.85■□□□□ 0.77
SCARB1-206ENST00000539320 GPR119Q8TDV5 335 aa19.85■□□□□ 0.77
SCARB1-206ENST00000539320 NUF2Q9BZD4 464 aa19.85■□□□□ 0.77
SCARB1-206ENST00000539320 KCNK9Q9NPC2 374 aa19.85■□□□□ 0.77
SCARB1-206ENST00000539320 FANCFQ9NPI8 374 aa19.85■□□□□ 0.77
SCARB1-206ENST00000539320 PCDHGB4Q9UN71 923 aa19.85■□□□□ 0.77
SCARB1-206ENST00000539320 ZNF195O14628 629 aa19.84■□□□□ 0.77
SCARB1-206ENST00000539320 EIF4E2O60573 245 aaKnown RBP19.84■□□□□ 0.77
SCARB1-206ENST00000539320 TUBBP07437 444 aa19.84■□□□□ 0.77
SCARB1-206ENST00000539320 PABPC4LP0CB38 370 aaKnown RBP19.84■□□□□ 0.77
SCARB1-206ENST00000539320 PRKCAP17252 672 aa19.84■□□□□ 0.77
SCARB1-206ENST00000539320 CARD18P57730 90 aa19.84■□□□□ 0.77
SCARB1-206ENST00000539320 SELENBP1Q13228 472 aa19.84■□□□□ 0.77
SCARB1-206ENST00000539320 MPP2Q14168 576 aa19.84■□□□□ 0.77
SCARB1-206ENST00000539320 TOMM34Q15785 309 aaPredicted RBP19.84■□□□□ 0.77
SCARB1-206ENST00000539320 PDZK1Q5T2W1 519 aa19.84■□□□□ 0.77
SCARB1-206ENST00000539320 ANKRD34AQ69YU3 496 aa19.84■□□□□ 0.77
SCARB1-206ENST00000539320 CROCCP2Q86T23 111 aa19.84■□□□□ 0.77
SCARB1-206ENST00000539320 ANKRD46Q86W74 232 aa19.84■□□□□ 0.77
SCARB1-206ENST00000539320 LRRC34Q8IZ02 419 aa19.84■□□□□ 0.77
SCARB1-206ENST00000539320 TOR1AIP2Q8NFQ8 470 aa19.84■□□□□ 0.77
SCARB1-206ENST00000539320 OR5W2Q8NH69 310 aa19.84■□□□□ 0.77
SCARB1-206ENST00000539320 RFWD2Q8NHY2 731 aa19.84■□□□□ 0.77
SCARB1-206ENST00000539320 RNF128Q8TEB7 428 aa19.84■□□□□ 0.77
SCARB1-206ENST00000539320 CPNE4Q96A23 557 aaPredicted RBP19.84■□□□□ 0.77
SCARB1-206ENST00000539320 TESCQ96BS2 214 aa19.84■□□□□ 0.77
SCARB1-206ENST00000539320 ARSGQ96EG1 525 aa19.84■□□□□ 0.77
SCARB1-206ENST00000539320 REXO5Q96IC2 774 aaKnown RBP19.84■□□□□ 0.77
SCARB1-206ENST00000539320 MARK4Q96L34 752 aa19.84■□□□□ 0.77
SCARB1-206ENST00000539320 MRGPRX4Q96LA9 322 aa19.84■□□□□ 0.77
SCARB1-206ENST00000539320 SRXN1Q9BYN0 137 aa19.84■□□□□ 0.77
SCARB1-206ENST00000539320 ZNF350Q9GZX5 532 aa19.84■□□□□ 0.77
SCARB1-206ENST00000539320 COQ10BQ9H8M1 238 aa19.84■□□□□ 0.77
SCARB1-206ENST00000539320 TIGARQ9NQ88 270 aa19.84■□□□□ 0.77
SCARB1-206ENST00000539320 HEATR5AQ86XA9 2040 aa19.84■□□□□ 0.77
SCARB1-206ENST00000539320 MAP1AP78559 2803 aaPredicted RBP19.84■□□□□ 0.77
SCARB1-206ENST00000539320 SERINC4A6NH21 518 aa19.83■□□□□ 0.77
SCARB1-206ENST00000539320 ZNF264O43296 627 aa19.83■□□□□ 0.77
SCARB1-206ENST00000539320 EFNA2O43921 213 aa19.83■□□□□ 0.77
SCARB1-206ENST00000539320 DIAPH2O60879 1101 aa19.83■□□□□ 0.77
SCARB1-206ENST00000539320 STX11O75558 287 aa19.83■□□□□ 0.77
SCARB1-206ENST00000539320 PPP3CBP16298 524 aa19.83■□□□□ 0.77
SCARB1-206ENST00000539320 LBPP18428 481 aa19.83■□□□□ 0.77
SCARB1-206ENST00000539320 CLNS1AP54105 237 aaKnown RBP19.83■□□□□ 0.77
SCARB1-206ENST00000539320 STX3Q13277 289 aa19.83■□□□□ 0.77
SCARB1-206ENST00000539320 GPR68Q15743 365 aa19.83■□□□□ 0.77
SCARB1-206ENST00000539320 DPY19L1Q2PZI1 675 aa19.83■□□□□ 0.77
SCARB1-206ENST00000539320 ANXA8L1Q5VT79 327 aa19.83■□□□□ 0.77
SCARB1-206ENST00000539320 GTF2IRD2BQ6EKJ0 949 aa19.83■□□□□ 0.77
SCARB1-206ENST00000539320 C16orf62Q7Z3J2 963 aa19.83■□□□□ 0.77
SCARB1-206ENST00000539320 GTF2IRD2Q86UP8 949 aa19.83■□□□□ 0.77
SCARB1-206ENST00000539320 STK32CQ86UX6 486 aa19.83■□□□□ 0.77
SCARB1-206ENST00000539320 MIPOL1Q8TD10 442 aa19.83■□□□□ 0.77
SCARB1-206ENST00000539320 ZFP90Q8TF47 636 aa19.83■□□□□ 0.77
SCARB1-206ENST00000539320 ABHD3Q8WU67 409 aa19.83■□□□□ 0.77
SCARB1-206ENST00000539320 ROBO4Q8WZ75 1007 aa19.83■□□□□ 0.77
SCARB1-206ENST00000539320 OR51I1Q9H343 314 aa19.83■□□□□ 0.77
SCARB1-206ENST00000539320 DLL4Q9NR61 685 aa19.83■□□□□ 0.77
SCARB1-206ENST00000539320 EXD2Q9NVH0 621 aa19.83■□□□□ 0.77
SCARB1-206ENST00000539320 ANKRD28O15084 1053 aa19.82■□□□□ 0.76
SCARB1-206ENST00000539320 SCN2BO60939 215 aa19.82■□□□□ 0.76
SCARB1-206ENST00000539320 NTN1O95631 604 aa19.82■□□□□ 0.76
SCARB1-206ENST00000539320 CPSF4O95639 269 aaKnown RBP19.82■□□□□ 0.76
SCARB1-206ENST00000539320 NID1P14543 1247 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms