RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 ASGR2P07307 311 aa17.3■□□□□ 0.36
SFSWAP-207ENST00000538548 PSMA6P60900 246 aaKnown RBP17.3■□□□□ 0.36
SFSWAP-207ENST00000538548 SEC61A1P61619 476 aaKnown RBP17.3■□□□□ 0.36
SFSWAP-207ENST00000538548 ZNF658BQ4V348 819 aaPredicted RBP17.3■□□□□ 0.36
SFSWAP-207ENST00000538548 TMEM255AQ5JRV8 349 aa17.3■□□□□ 0.36
SFSWAP-207ENST00000538548 PIGKQ92643 395 aa17.3■□□□□ 0.36
SFSWAP-207ENST00000538548 SAMD8Q96LT4 415 aa17.3■□□□□ 0.36
SFSWAP-207ENST00000538548 RHBGQ9H310 441 aa17.3■□□□□ 0.36
SFSWAP-207ENST00000538548 GPR55Q9Y2T6 319 aaPredicted RBP17.3■□□□□ 0.36
SFSWAP-207ENST00000538548 ZC3H12DA2A288 527 aaKnown RBP17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 CKBP12277 381 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 GABRA1P14867 456 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 TRHRP34981 398 aaPredicted RBP17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 RAD52P43351 418 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 MAZP56270 477 aaKnown RBP17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 AP3S2P59780 193 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 ERVK-21P61565 698 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 PRAMEF8Q5VWM4 474 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 PRAMEF7Q5VXH5 474 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 OR5M10Q6IEU7 315 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 DGLUCYQ7Z3D6 616 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 PDZD9Q8IXQ8 264 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 CFAP206Q8IYR0 622 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 ZNF454Q8N9F8 522 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 ZNF296Q8WUU4 475 aaPredicted RBP17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 AMDHD1Q96NU7 426 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 SLC6A17Q9H1V8 727 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 FN3KQ9H479 309 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 MRPL15Q9P015 296 aaKnown RBP17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 ZNF69Q9UC07 566 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 LSM7Q9UK45 103 aaKnown RBP17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 GMEB2Q9UKD1 530 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 FBXL3Q9UKT7 428 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 ZMIZ1Q9ULJ6 1067 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 YIPF1Q9Y548 306 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 KIAA0100Q14667 2235 aaKnown RBP17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 DNASE2O00115 360 aaPredicted RBP17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 TMPRSS11DO60235 418 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 CREBL2O60519 120 aaPredicted RBP17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 SELENOFO60613 162 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 GALTP07902 379 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 PPP3CBP16298 524 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 GJA1P17302 382 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 ERVFC1P60507 584 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 C17orf107Q6ZR85 190 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 MBOAT2Q6ZWT7 520 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 NUDT13Q86X67 352 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 OR1S1Q8NH92 325 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 BCL7CQ8WUZ0 217 aaPredicted RBP17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 ZFPM2Q8WW38 1151 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 YIPF4Q9BSR8 244 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 GPR160Q9UJ42 338 aa17.29■□□□□ 0.36
SFSWAP-207ENST00000538548 HMSDA8MTL9 139 aa17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 FLRT2O43155 660 aa17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 APOC3P02656 99 aa17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 ACVR1BP36896 505 aa17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 PRKAG1P54619 331 aa17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 NRG3P56975 720 aa17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 SIM1P81133 766 aaPredicted RBP17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 UBE2NLQ5JXB2 153 aa17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 PRPF38BQ5VTL8 546 aaKnown RBP17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 DMKNQ6E0U4 476 aaPredicted RBP17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 ATRAIDQ6UW56 229 aa17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 TMUB2Q71RG4 321 aa17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 IZUMO1Q8IYV9 350 aa17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 OR5T2Q8NGG2 359 aa17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 ATOH1Q92858 354 aaPredicted RBP17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 KISS1RQ969F8 398 aaPredicted RBP17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 CMTM3Q96MX0 182 aa17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 MED20Q9H944 212 aa17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 LHX9Q9NQ69 397 aa17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 HPF1Q9NWY4 346 aa17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 D6RAR5 112 aa17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 ZNF749O43361 778 aa17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 ATP1B1P05026 303 aa17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 GK2Q14410 553 aaPredicted RBP17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 LASP1Q14847 261 aaKnown RBP17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 LCTLQ6UWM7 567 aa17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 Q6ZVU0 165 aa17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 LINGO2Q7L985 606 aa17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 C4orf36Q96KX1 117 aa17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 ORAI3Q9BRQ5 295 aa17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 NOX3Q9HBY0 568 aa17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 GPN1Q9HCN4 374 aaPredicted RBP17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 TAS2R5Q9NYW4 299 aa17.28■□□□□ 0.36
SFSWAP-207ENST00000538548 PDE4DIPQ5VU43 2346 aa17.27■□□□□ 0.36
SFSWAP-207ENST00000538548 SDC3O75056 442 aa17.27■□□□□ 0.36
SFSWAP-207ENST00000538548 PTP4A3O75365 173 aa17.27■□□□□ 0.36
SFSWAP-207ENST00000538548 GATBO75879 557 aaKnown RBP17.27■□□□□ 0.36
SFSWAP-207ENST00000538548 CAPZA2P47755 286 aa17.27■□□□□ 0.36
SFSWAP-207ENST00000538548 GRM7Q14831 915 aa17.27■□□□□ 0.36
SFSWAP-207ENST00000538548 ZNF626Q68DY1 528 aa17.27■□□□□ 0.36
SFSWAP-207ENST00000538548 TXNDC8Q6A555 127 aa17.27■□□□□ 0.36
SFSWAP-207ENST00000538548 ST8SIA2Q92186 375 aa17.27■□□□□ 0.36
SFSWAP-207ENST00000538548 GHSRQ92847 366 aa17.27■□□□□ 0.36
SFSWAP-207ENST00000538548 MED11Q9P086 117 aa17.27■□□□□ 0.36
SFSWAP-207ENST00000538548 ZMAT5Q9UDW3 170 aaKnown RBP17.27■□□□□ 0.36
SFSWAP-207ENST00000538548 PCDHGA9Q9Y5G4 932 aaKnown RBP17.27■□□□□ 0.36
SFSWAP-207ENST00000538548 UNC80Q8N2C7 3258 aa17.27■□□□□ 0.36
SFSWAP-207ENST00000538548 SNRPGP15A8MWD9 76 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms