RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 ETFAP13804 333 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 HOXB9P17482 250 aaPredicted RBP11.84□□□□□ -0.51
PRKDC-206ENST00000536429 CAPN3P20807 821 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 SLC6A8P48029 635 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 P2RX1P51575 399 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 CCR4P51679 360 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 LRRC74AQ0VAA2 488 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 SKP2Q13309 424 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 CTU2Q2VPK5 515 aaKnown RBP11.84□□□□□ -0.51
PRKDC-206ENST00000536429 GPAT3Q53EU6 434 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 C6orf10Q5SRN2 563 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 DMRTC2Q8IXT2 367 aaPredicted RBP11.84□□□□□ -0.51
PRKDC-206ENST00000536429 ZNF619Q8N2I2 560 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 TMCO5AQ8N6Q1 288 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 METTL25Q8N6Q8 603 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 TRIML2Q8N7C3 387 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 FBXO27Q8NI29 283 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 FNDC9Q8TBE3 224 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 ZBTB8AQ96BR9 441 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 ITCHQ96J02 903 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 ADGRG7Q96K78 797 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 PAIP1Q9H074 479 aaKnown RBP11.84□□□□□ -0.51
PRKDC-206ENST00000536429 SAP130Q9H0E3 1048 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 SLC38A1Q9H2H9 487 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 RUBCNLQ9H714 662 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 NPHS2Q9NP85 383 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 SLC52A3Q9NQ40 469 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 CCDC167Q9P0B6 97 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 SLAMF8Q9P0V8 285 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 AP4B1Q9Y6B7 739 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 A0A0J9YW62 118 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 SLC22A20A6NK97 555 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 EEF1E1-BLOC1S5C9J1V9 151 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 LINC01387J3KSC0 135 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 NR5A2O00482 541 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 ZNF264O43296 627 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 EEF1E1O43324 174 aaKnown RBP11.83□□□□□ -0.52
PRKDC-206ENST00000536429 TNFSF13O75888 250 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 AQP8O94778 261 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 NUDT14O95848 222 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 GUSBP08236 651 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 UBTFL6P0CB48 400 aaPredicted RBP11.83□□□□□ -0.52
PRKDC-206ENST00000536429 ZCCHC18P0CG32 403 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 PRKCAP17252 672 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 PGM1P36871 562 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 EIF1AXP47813 144 aaKnown RBP11.83□□□□□ -0.52
PRKDC-206ENST00000536429 KRTAP10-9P60411 292 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 STX1BP61266 288 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 SF3A3Q12874 501 aaKnown RBP eCLIP11.83□□□□□ -0.52
PRKDC-206ENST00000536429 FGFBP1Q14512 234 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 PON3Q15166 354 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 PAGE3Q5JUK9 113 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 BLOC1S3Q6QNY0 202 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 MSANTD1Q6ZTZ1 278 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 MSRB3Q8IXL7 192 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 OR5W2Q8NH69 310 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 TRNT1Q96Q11 434 aaKnown RBP11.83□□□□□ -0.52
PRKDC-206ENST00000536429 TM9SF2Q99805 663 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 THUMPD3Q9BV44 507 aaKnown RBP11.83□□□□□ -0.52
PRKDC-206ENST00000536429 RMND5AQ9H871 391 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 TPT1P8Q9HAU6 139 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 HHATLQ9HCP6 504 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 POLE3Q9NRF9 147 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 JKAMPQ9P055 326 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 PCDHB14Q9Y5E9 798 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 ARHGAP21Q5T5U3 1957 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 DOCK7Q96N67 2140 aa11.83□□□□□ -0.52
PRKDC-206ENST00000536429 UQCRHLA0A096LP55 91 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 A0A1W2PNV4 684 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 SYT5O00445 386 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 TNFSF11O14788 317 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 CXCL13O43927 109 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 EIF4E2O60573 245 aaKnown RBP11.82□□□□□ -0.52
PRKDC-206ENST00000536429 ADAM11O75078 769 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 ANP32DO95626 131 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 NTN1O95631 604 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 KRT75O95678 551 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 IL18BPO95998 194 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 CSTAP01040 98 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 NUDT7P0C024 238 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 UQCRC1P31930 480 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 SFTPDP35247 375 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 OPRM1P35372 400 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 CRATP43155 626 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 ASCL1P50553 236 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 SUMO3P55854 103 aaPredicted RBP11.82□□□□□ -0.52
PRKDC-206ENST00000536429 RAC1P63000 192 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 QPRTQ15274 297 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 AGKQ53H12 422 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 AP1ARQ63HQ0 302 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 CGB2Q6NT52 195 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 VWA1Q6PCB0 445 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 CHMP1BQ7LBR1 199 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 P4HA3Q7Z4N8 544 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 GDF7Q7Z4P5 450 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 LUZP2Q86TE4 346 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 C10orf111Q8N326 155 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 FAM71CQ8NEG0 241 aa11.82□□□□□ -0.52
PRKDC-206ENST00000536429 OR10D3Q8NH80 312 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms