RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 KRCC1Q9NPI7 259 aaPredicted RBP12.37□□□□□ -0.43
VPS33B-202ENST00000535906 POLE3Q9NRF9 147 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 NPAP1Q9NZP6 1156 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 PLEKHB1Q9UF11 243 aaPredicted RBP12.37□□□□□ -0.43
VPS33B-202ENST00000535906 TMEM184BQ9Y519 407 aaPredicted RBP12.37□□□□□ -0.43
VPS33B-202ENST00000535906 PCDHGB2Q9Y5G2 931 aa12.37□□□□□ -0.43
VPS33B-202ENST00000535906 IGHV5-51A0A0C4DH38 117 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 UNC119BA6NIH7 251 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 FAM183AA6NL82 134 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 FMO6PO60774 539 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 CTNSO60931 367 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 MAOAP21397 527 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 SLC9A3P48764 834 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 PPM1FP49593 454 aaPredicted RBP12.36□□□□□ -0.43
VPS33B-202ENST00000535906 RPS25P62851 125 aaKnown RBP12.36□□□□□ -0.43
VPS33B-202ENST00000535906 HNRNPA0Q13151 305 aaKnown RBP12.36□□□□□ -0.43
VPS33B-202ENST00000535906 BAK1Q16611 211 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 RNF113BQ8IZP6 322 aaKnown RBP12.36□□□□□ -0.43
VPS33B-202ENST00000535906 UFD1Q92890 307 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 RFKQ969G6 155 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 VSTM2LQ96N03 204 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 ARHGAP9Q9BRR9 750 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 TEX12Q9BXU0 123 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 FOXQ1Q9C009 403 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 HINT3Q9NQE9 182 aaKnown RBP12.36□□□□□ -0.43
VPS33B-202ENST00000535906 MED17Q9NVC6 651 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 CBLCQ9ULV8 474 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 YARS2Q9Y2Z4 477 aaKnown RBP12.36□□□□□ -0.43
VPS33B-202ENST00000535906 HTR3EA5X5Y0 456 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 SLC30A4O14863 429 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 RFPL3O75679 317 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 ATXN8OSP0DMR3 200 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 TBXA2RP21731 343 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 GABRA5P31644 462 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 DBPQ10586 325 aaPredicted RBP12.36□□□□□ -0.43
VPS33B-202ENST00000535906 FAM53BQ14153 422 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 ZNF267Q14586 743 aaPredicted RBP12.36□□□□□ -0.43
VPS33B-202ENST00000535906 DEFB133Q30KQ1 61 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 GLYR1Q49A26 553 aaPredicted RBP12.36□□□□□ -0.43
VPS33B-202ENST00000535906 QSOX2Q6ZRP7 698 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 NRARPQ7Z6K4 114 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 CPOQ8IVL8 374 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 ZNF485Q8NCK3 441 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 BRIX1Q8TDN6 353 aaKnown RBP12.36□□□□□ -0.43
VPS33B-202ENST00000535906 GRHL3Q8TE85 626 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 C1GALT1C1Q96EU7 318 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 MMABQ96EY8 250 aaPredicted RBP12.36□□□□□ -0.43
VPS33B-202ENST00000535906 SPACA7Q96KW9 195 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 PTCHD1Q96NR3 888 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 TGM7Q96PF1 710 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 CD180Q99467 661 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 RERGLQ9H628 205 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 ABCB9Q9NP78 766 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 MEPEQ9NQ76 525 aaPredicted RBP12.36□□□□□ -0.43
VPS33B-202ENST00000535906 PRTFDC1Q9NRG1 225 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 FLRT3Q9NZU0 649 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 POU2F3Q9UKI9 436 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 GRIP1Q9Y3R0 1128 aa12.36□□□□□ -0.43
VPS33B-202ENST00000535906 LILRA5A6NI73 299 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 SOCS6O14544 535 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 SDC3O75056 442 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 NSA2O95478 260 aaKnown RBP12.35□□□□□ -0.43
VPS33B-202ENST00000535906 CLEC2LP0C7M8 214 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 IL7P13232 177 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 FGF9P31371 208 aaPredicted RBP12.35□□□□□ -0.43
VPS33B-202ENST00000535906 SDC2P34741 201 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 SLC1A3P43003 542 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 OR2B6P58173 313 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 RACK1P63244 317 aaKnown RBP12.35□□□□□ -0.43
VPS33B-202ENST00000535906 IGLV3-21P80748 117 aaPredicted RBP12.35□□□□□ -0.43
VPS33B-202ENST00000535906 ZNHIT3Q15649 155 aaPredicted RBP12.35□□□□□ -0.43
VPS33B-202ENST00000535906 TMEM44Q2T9K0 475 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 NXNL2Q5VZ03 156 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 SMARCD3Q6STE5 483 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 NPSR1Q6W5P4 371 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 B3GLCTQ6Y288 498 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 ZNF595Q8IYB9 648 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 RCBTB1Q8NDN9 531 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 FANK1Q8TC84 345 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 BPIFA2Q96DR5 249 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 HS6ST2Q96MM7 605 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 HOXD1Q9GZZ0 328 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 MIXL1Q9H2W2 232 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 UCK1Q9HA47 277 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 MRPS33Q9Y291 106 aaKnown RBP12.35□□□□□ -0.43
VPS33B-202ENST00000535906 SDK1Q7Z5N4 2213 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.35□□□□□ -0.43
VPS33B-202ENST00000535906 A0A1W2PQL4 384 aaPredicted RBP12.35□□□□□ -0.43
VPS33B-202ENST00000535906 BHLHE40O14503 412 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 HMGN1P05114 100 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 MLLT3P42568 568 aaPredicted RBP12.35□□□□□ -0.43
VPS33B-202ENST00000535906 ACAA2P42765 397 aaKnown RBP12.35□□□□□ -0.43
VPS33B-202ENST00000535906 GPR3P46089 330 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 GPR50Q13585 617 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 NNATQ16517 81 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 AMZ1Q400G9 498 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 CRTC2Q53ET0 693 aaPredicted RBP12.35□□□□□ -0.43
VPS33B-202ENST00000535906 SLC35F1Q5T1Q4 408 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 ARMC4Q5T2S8 1044 aa12.35□□□□□ -0.43
VPS33B-202ENST00000535906 NKAIN2Q5VXU1 208 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms