RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 GTF2IRD2Q86UP8 949 aa18.36■□□□□ 0.53
LTBR-205ENST00000535739 PRIMA1Q86XR5 153 aa18.36■□□□□ 0.53
LTBR-205ENST00000535739 ABHD3Q8WU67 409 aa18.36■□□□□ 0.53
LTBR-205ENST00000535739 STACQ99469 402 aa18.36■□□□□ 0.53
LTBR-205ENST00000535739 TMEM204Q9BSN7 226 aa18.36■□□□□ 0.53
LTBR-205ENST00000535739 SRXN1Q9BYN0 137 aa18.36■□□□□ 0.53
LTBR-205ENST00000535739 PIGUQ9H490 435 aa18.36■□□□□ 0.53
LTBR-205ENST00000535739 DUSP22Q9NRW4 184 aa18.36■□□□□ 0.53
LTBR-205ENST00000535739 TRAF6Q9Y4K3 522 aa18.36■□□□□ 0.53
LTBR-205ENST00000535739 HS3ST1O14792 307 aa18.35■□□□□ 0.53
LTBR-205ENST00000535739 HSPA4LO95757 839 aa18.35■□□□□ 0.53
LTBR-205ENST00000535739 NUDT14O95848 222 aa18.35■□□□□ 0.53
LTBR-205ENST00000535739 FGF4P08620 206 aa18.35■□□□□ 0.53
LTBR-205ENST00000535739 NID1P14543 1247 aa18.35■□□□□ 0.53
LTBR-205ENST00000535739 ALDH3A1P30838 453 aa18.35■□□□□ 0.53
LTBR-205ENST00000535739 HPCAL1P37235 193 aa18.35■□□□□ 0.53
LTBR-205ENST00000535739 EIF1P41567 113 aaKnown RBP18.35■□□□□ 0.53
LTBR-205ENST00000535739 TSC22D1Q15714 1073 aa18.35■□□□□ 0.53
LTBR-205ENST00000535739 ZNF239Q16600 458 aaKnown RBP18.35■□□□□ 0.53
LTBR-205ENST00000535739 ARL13AQ5H913 290 aaPredicted RBP18.35■□□□□ 0.53
LTBR-205ENST00000535739 NUFIP2Q7Z417 695 aaKnown RBP18.35■□□□□ 0.53
LTBR-205ENST00000535739 FBXO27Q8NI29 283 aa18.35■□□□□ 0.53
LTBR-205ENST00000535739 AGR3Q8TD06 166 aa18.35■□□□□ 0.53
LTBR-205ENST00000535739 RNF128Q8TEB7 428 aa18.35■□□□□ 0.53
LTBR-205ENST00000535739 REXO5Q96IC2 774 aaKnown RBP18.35■□□□□ 0.53
LTBR-205ENST00000535739 ATP6V1G3Q96LB4 118 aa18.35■□□□□ 0.53
LTBR-205ENST00000535739 MECRQ9BV79 373 aa18.35■□□□□ 0.53
LTBR-205ENST00000535739 OR10A4Q9H209 315 aa18.35■□□□□ 0.53
LTBR-205ENST00000535739 CARD8Q9Y2G2 431 aa18.35■□□□□ 0.53
LTBR-205ENST00000535739 KCNE3Q9Y6H6 103 aa18.35■□□□□ 0.53
LTBR-205ENST00000535739 TMEM114B3SHH9 223 aa18.34■□□□□ 0.53
LTBR-205ENST00000535739 PEX11AO75192 247 aa18.34■□□□□ 0.53
LTBR-205ENST00000535739 GCM2O75603 506 aaPredicted RBP18.34■□□□□ 0.53
LTBR-205ENST00000535739 PAX1P15863 534 aa18.34■□□□□ 0.53
LTBR-205ENST00000535739 ATP6V1C1P21283 382 aa18.34■□□□□ 0.53
LTBR-205ENST00000535739 ELK4P28324 431 aa18.34■□□□□ 0.53
LTBR-205ENST00000535739 TP53BP2Q13625 1128 aa18.34■□□□□ 0.53
LTBR-205ENST00000535739 TOMM34Q15785 309 aaPredicted RBP18.34■□□□□ 0.53
LTBR-205ENST00000535739 NDUFAF6Q330K2 333 aa18.34■□□□□ 0.53
LTBR-205ENST00000535739 KLHL26Q53HC5 615 aa18.34■□□□□ 0.53
LTBR-205ENST00000535739 TMEM201Q5SNT2 666 aa18.34■□□□□ 0.53
LTBR-205ENST00000535739 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.34■□□□□ 0.53
LTBR-205ENST00000535739 CDC73Q6P1J9 531 aa18.34■□□□□ 0.53
LTBR-205ENST00000535739 MTERF4Q7Z6M4 381 aaKnown RBP18.34■□□□□ 0.53
LTBR-205ENST00000535739 TUSC5Q8IXB3 177 aa18.34■□□□□ 0.53
LTBR-205ENST00000535739 ZNF611Q8N823 705 aa18.34■□□□□ 0.53
LTBR-205ENST00000535739 RAB3IL1Q8TBN0 382 aa18.34■□□□□ 0.53
LTBR-205ENST00000535739 AKAP1Q92667 903 aaKnown RBP eCLIP18.34■□□□□ 0.53
LTBR-205ENST00000535739 CPNE4Q96A23 557 aaPredicted RBP18.34■□□□□ 0.53
LTBR-205ENST00000535739 S100PBPQ96BU1 408 aa18.34■□□□□ 0.53
LTBR-205ENST00000535739 TLCD1Q96CP7 247 aa18.34■□□□□ 0.53
LTBR-205ENST00000535739 ACTRT3Q9BYD9 372 aa18.34■□□□□ 0.53
LTBR-205ENST00000535739 CXorf56Q9H5V9 222 aa18.34■□□□□ 0.53
LTBR-205ENST00000535739 CXorf36Q9H7Y0 433 aa18.34■□□□□ 0.53
LTBR-205ENST00000535739 ZNF701Q9NV72 531 aaPredicted RBP18.34■□□□□ 0.53
LTBR-205ENST00000535739 ICAM5Q9UMF0 924 aa18.34■□□□□ 0.53
LTBR-205ENST00000535739 ACTL7BQ9Y614 415 aa18.34■□□□□ 0.53
LTBR-205ENST00000535739 SONP18583 2426 aaKnown RBP18.34■□□□□ 0.53
LTBR-205ENST00000535739 RTTNQ86VV8 2226 aa18.34■□□□□ 0.53
LTBR-205ENST00000535739 ANK3Q12955 4377 aaKnown RBP18.34■□□□□ 0.53
LTBR-205ENST00000535739 ZNF195O14628 629 aa18.33■□□□□ 0.52
LTBR-205ENST00000535739 NPHS1O60500 1241 aa18.33■□□□□ 0.52
LTBR-205ENST00000535739 PABPC4LP0CB38 370 aaKnown RBP18.33■□□□□ 0.52
LTBR-205ENST00000535739 DDX5P17844 614 aaKnown RBP18.33■□□□□ 0.52
LTBR-205ENST00000535739 CCT3P49368 545 aaKnown RBP18.33■□□□□ 0.52
LTBR-205ENST00000535739 P2RX1P51575 399 aa18.33■□□□□ 0.52
LTBR-205ENST00000535739 ATP5J2P56134 94 aa18.33■□□□□ 0.52
LTBR-205ENST00000535739 MAGOHP61326 146 aaKnown RBP18.33■□□□□ 0.52
LTBR-205ENST00000535739 PTGR1Q14914 329 aa18.33■□□□□ 0.52
LTBR-205ENST00000535739 RNPS1Q15287 305 aaKnown RBP18.33■□□□□ 0.52
LTBR-205ENST00000535739 TMEM176BQ3YBM2 270 aaPredicted RBP18.33■□□□□ 0.52
LTBR-205ENST00000535739 HSP90B2PQ58FF3 399 aa18.33■□□□□ 0.52
LTBR-205ENST00000535739 TTMPQ5BVD1 217 aa18.33■□□□□ 0.52
LTBR-205ENST00000535739 DCST2Q5T1A1 773 aa18.33■□□□□ 0.52
LTBR-205ENST00000535739 TFAP2EQ6VUC0 442 aa18.33■□□□□ 0.52
LTBR-205ENST00000535739 GABRG1Q8N1C3 465 aa18.33■□□□□ 0.52
LTBR-205ENST00000535739 ZNF527Q8NB42 609 aa18.33■□□□□ 0.52
LTBR-205ENST00000535739 ATP6V1C2Q8NEY4 427 aa18.33■□□□□ 0.52
LTBR-205ENST00000535739 STEAP2Q8NFT2 490 aa18.33■□□□□ 0.52
LTBR-205ENST00000535739 ADAMTS15Q8TE58 950 aa18.33■□□□□ 0.52
LTBR-205ENST00000535739 ZNF524Q96C55 264 aa18.33■□□□□ 0.52
LTBR-205ENST00000535739 APOPT1Q96IL0 206 aa18.33■□□□□ 0.52
LTBR-205ENST00000535739 PPP3R2Q96LZ3 170 aa18.33■□□□□ 0.52
LTBR-205ENST00000535739 C1orf50Q9BV19 199 aa18.33■□□□□ 0.52
LTBR-205ENST00000535739 COQ10BQ9H8M1 238 aa18.33■□□□□ 0.52
LTBR-205ENST00000535739 TIGARQ9NQ88 270 aa18.33■□□□□ 0.52
LTBR-205ENST00000535739 GPATCH2Q9NW75 528 aa18.33■□□□□ 0.52
LTBR-205ENST00000535739 KLHL13Q9P2N7 655 aa18.33■□□□□ 0.52
LTBR-205ENST00000535739 KIAA1324LA8MWY0 1029 aaPredicted RBP18.32■□□□□ 0.52
LTBR-205ENST00000535739 HMGB1P1B2RPK0 211 aaPredicted RBP18.32■□□□□ 0.52
LTBR-205ENST00000535739 INAFM1C9JVW0 142 aa18.32■□□□□ 0.52
LTBR-205ENST00000535739 C6orf47O95873 294 aa18.32■□□□□ 0.52
LTBR-205ENST00000535739 CREB1P16220 341 aa18.32■□□□□ 0.52
LTBR-205ENST00000535739 ADH6P28332 368 aa18.32■□□□□ 0.52
LTBR-205ENST00000535739 MAPK1P28482 360 aa18.32■□□□□ 0.52
LTBR-205ENST00000535739 RPL3P39023 403 aaKnown RBP18.32■□□□□ 0.52
LTBR-205ENST00000535739 XKR7Q5GH72 579 aa18.32■□□□□ 0.52
LTBR-205ENST00000535739 ZCCHC23Q6ZST2 131 aa18.32■□□□□ 0.52
LTBR-205ENST00000535739 FCRLAQ7L513 359 aa18.32■□□□□ 0.52
LTBR-205ENST00000535739 BANPQ8N9N5 519 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms