RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 REG4Q9BYZ8 158 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 NMUR2Q9GZQ4 415 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 SLCO5A1Q9H2Y9 848 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 COQ10BQ9H8M1 238 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 BARX1Q9HBU1 254 aaPredicted RBP9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 GPATCH2Q9NW75 528 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 DNAJC15Q9Y5T4 150 aa9.96□□□□□ -0.82
CLSTN3-206ENST00000535668 ELOA3DA6NLF2 546 aaPredicted RBP9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 SHISA8B8ZZ34 492 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 SCDO00767 359 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 ZNF195O14628 629 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 TNFSF11O14788 317 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 DNPH1O43598 174 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 LYPLA1O75608 230 aaPredicted RBP9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 CD8AP01732 235 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 HMGN2P05204 90 aaKnown RBP9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 KRT16P08779 473 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 ALOX5P09917 674 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 PRKCAP17252 672 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 FKBP2P26885 142 aaKnown RBP9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 PRIM2P49643 509 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 ATP12AP54707 1039 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 ZNF117Q03924 483 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 DMTNQ08495 405 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 NRF1Q16656 503 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 EXOC3L2Q2M3D2 409 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 ELOA3BQ3SY89 546 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 TMEM201Q5SNT2 666 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 TIMM23BQ5SRD1 257 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 LIPMQ5VYY2 423 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 KANK2Q63ZY3 851 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 CDC73Q6P1J9 531 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 FCRLAQ7L513 359 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 CCNYL1Q8N7R7 359 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 ZNF527Q8NB42 609 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 ELOA3Q8NG57 546 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 OR10H5Q8NGA6 315 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 OR2T11Q8NH01 316 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 RAB3IL1Q8TBN0 382 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 ZNF75CPQ92670 426 aaPredicted RBP9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 MOAP1Q96BY2 351 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 COQ8BQ96D53 544 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 TUBB1Q9H4B7 451 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 FBXO34Q9NWN3 711 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 MKS1Q9NXB0 559 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 KLHL9Q9P2J3 617 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 LAMP3Q9UQV4 416 aa9.95□□□□□ -0.82
CLSTN3-206ENST00000535668 DPRXA6NFQ7 191 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 AZIN1O14977 448 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 SMAD7O15105 426 aaKnown RBP9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 CYTIPO60759 359 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 CD3EP07766 207 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 BCKDHAP12694 445 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 CPA3P15088 417 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 HPGDP15428 266 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 TCEA1P23193 301 aaKnown RBP9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 DSCR9P59020 149 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 POU6F2P78424 691 aaPredicted RBP9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 HSPB3Q12988 150 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 SELENBP1Q13228 472 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 XKR7Q5GH72 579 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 ARL13AQ5H913 290 aaPredicted RBP9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 PODNL1Q6PEZ8 512 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 CBLN3Q6UW01 205 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 NUFIP2Q7Z417 695 aaKnown RBP9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 TUSC5Q8IXB3 177 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 RIMKLAQ8IXN7 391 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 IFT20Q8IY31 132 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 COX18Q8N8Q8 333 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 OR56A1Q8NGH5 318 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 SFXN5Q8TD22 340 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 ZFP90Q8TF47 636 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 ABHD3Q8WU67 409 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 OR5P2Q8WZ92 322 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 ST8SIA1Q92185 356 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 SLC9A6Q92581 669 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 KISS1RQ969F8 398 aaPredicted RBP9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 CIDECQ96AQ7 238 aaPredicted RBP9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 C16orf58Q96GQ5 468 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 REXO5Q96IC2 774 aaKnown RBP9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 KLHDC3Q9BQ90 382 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 PSD2Q9BQI7 771 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 ACTRT3Q9BYD9 372 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 SRXN1Q9BYN0 137 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 FAIMQ9NVQ4 179 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 CLEC4AQ9UMR7 237 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 DTNAQ9Y4J8 743 aa9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 YLPM1P49750 1951 aaKnown RBP9.94□□□□□ -0.82
CLSTN3-206ENST00000535668 TMEM114B3SHH9 223 aa9.93□□□□□ -0.82
CLSTN3-206ENST00000535668 SHISA9B4DS77 424 aa9.93□□□□□ -0.82
CLSTN3-206ENST00000535668 H3BNH8 94 aa9.93□□□□□ -0.82
CLSTN3-206ENST00000535668 AK1P00568 194 aa9.93□□□□□ -0.82
CLSTN3-206ENST00000535668 IFNA2P01563 188 aa9.93□□□□□ -0.82
CLSTN3-206ENST00000535668 IGHV4-39P01824 125 aa9.93□□□□□ -0.82
CLSTN3-206ENST00000535668 SHC1P29353 583 aa9.93□□□□□ -0.82
CLSTN3-206ENST00000535668 GPC1P35052 558 aa9.93□□□□□ -0.82
CLSTN3-206ENST00000535668 SERPINB5P36952 375 aa9.93□□□□□ -0.82
CLSTN3-206ENST00000535668 CLK1P49759 484 aaKnown RBP9.93□□□□□ -0.82
CLSTN3-206ENST00000535668 SLC16A1P53985 500 aa9.93□□□□□ -0.82
CLSTN3-206ENST00000535668 ZNF141Q15928 474 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms