RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	RNASE8	Q8TDE3	154 aa	Known RBP	3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ST7L	Q8TDW4	575 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ZNF418	Q8TF45	676 aa	Predicted RBP	3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	FCAMR	Q8WWV6	532 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	OR1E3	Q8WZA6	343 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	GTF3A	Q92664	365 aa	Known RBP	3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SLCO2A1	Q92959	643 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	RNASE6	Q93091	150 aa	Known RBP	3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	EPSTI1	Q96J88	318 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PANX3	Q96QZ0	392 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	LRRC2	Q9BYS8	371 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ACPT	Q9BZG2	426 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SDCBP2	Q9H190	292 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	P2RY12	Q9H244	342 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	DYRK4	Q9NR20	520 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	DNAJC11	Q9NVH1	559 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	TAAR2	Q9P1P5	351 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	RARRES3	Q9UL19	164 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	CHKB	Q9Y259	395 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	EIF3L	Q9Y262	564 aa	Known RBP	3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442		U3KQK5	164 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PHF3	Q92576	2039 aa	Known RBP	3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	DNAJC13	O75165	2243 aa		3.86	□□□□□ -1.79
ECHDC1-223	ENST00000534442	RAI1	Q7Z5J4	1906 aa	Predicted RBP	3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	IGHV4-30-2	A0A087WSY4	118 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	C13orf42	A0A1B0GVH6	325 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	BICDL2	A1A5D9	508 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	C5orf51	A6NDU8	294 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	USP27X	A6NNY8	438 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	TMEM110-MUSTN1	A8MSY1	372 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442		H0YCG3	227 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	TBL1X	O60907	577 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PALM	O75781	387 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	CTSL	P07711	333 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	P4HA1	P13674	534 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	CA6	P23280	308 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	GLIPR1	P48060	266 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SERPINH1	P50454	418 aa	Known RBP	3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	UCP2	P55851	309 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	HILS1	P60008	231 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	TFAM	Q00059	246 aa	Known RBP	3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	LOXL1	Q08397	574 aa	Predicted RBP	3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ARL16	Q0P5N6	197 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	WDR38	Q5JTN6	314 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	CCNYL2	Q5T2Q4	361 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	GALNT17	Q6IS24	598 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	DNM1P46	Q6ZS02	220 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	USP43	Q70EL4	1123 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	MARK2	Q7KZI7	788 aa	Known RBP	3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	DAW1	Q8N136	415 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	CSGALNACT2	Q8N6G5	542 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	CCDC63	Q8NA47	563 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SLC26A7	Q8TE54	656 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	CKAP2	Q8WWK9	683 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SMARCD1	Q96GM5	515 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	NSL1	Q96IY1	281 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	RBM41	Q96IZ5	413 aa	Known RBP	3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	C9orf72	Q96LT7	481 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	TSSK2	Q96PF2	358 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	BTBD9	Q96Q07	612 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	RASL10B	Q96S79	203 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	RBM4B	Q9BQ04	359 aa	Known RBP	3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PIGQ	Q9BRB3	760 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	MED10	Q9BTT4	135 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	UBQLN3	Q9H347	655 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	RNPEPL1	Q9HAU8	725 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	NMUR1	Q9HB89	426 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ZFP57	Q9NU63	452 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	STOML2	Q9UJZ1	356 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	FBXL4	Q9UKA2	621 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	FBXW2	Q9UKT8	454 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	DNAH10	Q8IVF4	4471 aa		3.85	□□□□□ -1.79
ECHDC1-223	ENST00000534442	HEATR5A	Q86XA9	2040 aa		3.84	□□□□□ -1.79
ECHDC1-223	ENST00000534442	TRBV5-5	A0A0J9YX44	114 aa		3.84	□□□□□ -1.79
ECHDC1-223	ENST00000534442	CCT8L1P	A6NM43	557 aa		3.84	□□□□□ -1.79
ECHDC1-223	ENST00000534442	NPIPA3	F8WFD2	350 aa		3.84	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ZBTB14	O43829	449 aa		3.84	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ACSL4	O60488	711 aa		3.84	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SOCS5	O75159	536 aa		3.84	□□□□□ -1.79
ECHDC1-223	ENST00000534442	CRCP	O75575	148 aa		3.84	□□□□□ -1.79
ECHDC1-223	ENST00000534442	SCRG1	O75711	98 aa		3.84	□□□□□ -1.79
ECHDC1-223	ENST00000534442	RAD51D	O75771	328 aa		3.84	□□□□□ -1.79
ECHDC1-223	ENST00000534442	KLF7	O75840	302 aa	Predicted RBP	3.84	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PIGR	P01833	764 aa		3.84	□□□□□ -1.79
ECHDC1-223	ENST00000534442	AMD1	P17707	334 aa		3.84	□□□□□ -1.79
ECHDC1-223	ENST00000534442	LHCGR	P22888	699 aa		3.84	□□□□□ -1.79
ECHDC1-223	ENST00000534442	RPA1	P27694	616 aa		3.84	□□□□□ -1.79
ECHDC1-223	ENST00000534442	NDST1	P52848	882 aa		3.84	□□□□□ -1.79
ECHDC1-223	ENST00000534442	CDH18	Q13634	790 aa		3.84	□□□□□ -1.79
ECHDC1-223	ENST00000534442	FHL1	Q13642	323 aa		3.84	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PIGH	Q14442	188 aa	Predicted RBP	3.84	□□□□□ -1.79
ECHDC1-223	ENST00000534442	P2RY6	Q15077	328 aa		3.84	□□□□□ -1.79
ECHDC1-223	ENST00000534442	ACCSL	Q4AC99	568 aa		3.84	□□□□□ -1.79
ECHDC1-223	ENST00000534442	CCDC92	Q53HC0	331 aa	Predicted RBP	3.84	□□□□□ -1.79
ECHDC1-223	ENST00000534442	C20orf194	Q5TEA3	1177 aa		3.84	□□□□□ -1.79
ECHDC1-223	ENST00000534442	PM20D1	Q6GTS8	502 aa		3.84	□□□□□ -1.79
ECHDC1-223	ENST00000534442	RAB12	Q6IQ22	244 aa		3.84	□□□□□ -1.79
ECHDC1-223	ENST00000534442	KLHL10	Q6JEL2	608 aa		3.84	□□□□□ -1.79
ECHDC1-223	ENST00000534442	UGT3A1	Q6NUS8	523 aa		3.84	□□□□□ -1.79

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