RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 SDF2Q99470 211 aa13.84□□□□□ -0.19
CPSF1-211ENST00000533492 KLHDC3Q9BQ90 382 aa13.84□□□□□ -0.19
CPSF1-211ENST00000533492 KLHL4Q9C0H6 718 aa13.84□□□□□ -0.19
CPSF1-211ENST00000533492 PLSCR4Q9NRQ2 329 aa13.84□□□□□ -0.19
CPSF1-211ENST00000533492 ACTL7BQ9Y614 415 aa13.84□□□□□ -0.19
CPSF1-211ENST00000533492 GJE1A6NN92 205 aa13.83□□□□□ -0.2
CPSF1-211ENST00000533492 ZNF195O14628 629 aa13.83□□□□□ -0.2
CPSF1-211ENST00000533492 ZNF264O43296 627 aa13.83□□□□□ -0.2
CPSF1-211ENST00000533492 OIP5O43482 229 aa13.83□□□□□ -0.2
CPSF1-211ENST00000533492 ATE1O95260 518 aa13.83□□□□□ -0.2
CPSF1-211ENST00000533492 CPSF4O95639 269 aaKnown RBP13.83□□□□□ -0.2
CPSF1-211ENST00000533492 AK1P00568 194 aa13.83□□□□□ -0.2
CPSF1-211ENST00000533492 PABPC4LP0CB38 370 aaKnown RBP13.83□□□□□ -0.2
CPSF1-211ENST00000533492 LBPP18428 481 aa13.83□□□□□ -0.2
CPSF1-211ENST00000533492 KLK2P20151 261 aa13.83□□□□□ -0.2
CPSF1-211ENST00000533492 IL11P20809 199 aa13.83□□□□□ -0.2
CPSF1-211ENST00000533492 ELK4P28324 431 aa13.83□□□□□ -0.2
CPSF1-211ENST00000533492 GPR68Q15743 365 aa13.83□□□□□ -0.2
CPSF1-211ENST00000533492 DEFB113Q30KQ7 82 aa13.83□□□□□ -0.2
CPSF1-211ENST00000533492 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.83□□□□□ -0.2
CPSF1-211ENST00000533492 ANXA8L1Q5VT79 327 aa13.83□□□□□ -0.2
CPSF1-211ENST00000533492 ANKRD34AQ69YU3 496 aa13.83□□□□□ -0.2
CPSF1-211ENST00000533492 ZNF550Q7Z398 422 aa13.83□□□□□ -0.2
CPSF1-211ENST00000533492 C16orf62Q7Z3J2 963 aa13.83□□□□□ -0.2
CPSF1-211ENST00000533492 CLEC4FQ8N1N0 589 aa13.83□□□□□ -0.2
CPSF1-211ENST00000533492 ATP6V1C2Q8NEY4 427 aa13.83□□□□□ -0.2
CPSF1-211ENST00000533492 OR8J2Q8NGG1 315 aa13.83□□□□□ -0.2
CPSF1-211ENST00000533492 ARL8AQ96BM9 186 aa13.83□□□□□ -0.2
CPSF1-211ENST00000533492 PIK3IP1Q96FE7 263 aa13.83□□□□□ -0.2
CPSF1-211ENST00000533492 ZC3HAV1LQ96H79 300 aaKnown RBP13.83□□□□□ -0.2
CPSF1-211ENST00000533492 SORT1Q99523 831 aa13.83□□□□□ -0.2
CPSF1-211ENST00000533492 TMUB1Q9BVT8 246 aa13.83□□□□□ -0.2
CPSF1-211ENST00000533492 NUF2Q9BZD4 464 aa13.83□□□□□ -0.2
CPSF1-211ENST00000533492 EXD2Q9NVH0 621 aa13.83□□□□□ -0.2
CPSF1-211ENST00000533492 ICAM5Q9UMF0 924 aa13.83□□□□□ -0.2
CPSF1-211ENST00000533492 GPC6Q9Y625 555 aaPredicted RBP13.83□□□□□ -0.2
CPSF1-211ENST00000533492 C2CD3Q4AC94 2353 aa13.82□□□□□ -0.2
CPSF1-211ENST00000533492 PRSS51A0A1B0GVH4 220 aa13.82□□□□□ -0.2
CPSF1-211ENST00000533492 NPIPB9F8W1W9 429 aa13.82□□□□□ -0.2
CPSF1-211ENST00000533492 EIF4E2O60573 245 aaKnown RBP13.82□□□□□ -0.2
CPSF1-211ENST00000533492 SS18L1O75177 396 aaPredicted RBP13.82□□□□□ -0.2
CPSF1-211ENST00000533492 STX11O75558 287 aa13.82□□□□□ -0.2
CPSF1-211ENST00000533492 CYP7B1O75881 506 aa13.82□□□□□ -0.2
CPSF1-211ENST00000533492 UBL4AP11441 157 aa13.82□□□□□ -0.2
CPSF1-211ENST00000533492 CRYGSP22914 178 aa13.82□□□□□ -0.2
CPSF1-211ENST00000533492 CCR4P51679 360 aa13.82□□□□□ -0.2
CPSF1-211ENST00000533492 CASP9P55211 416 aa13.82□□□□□ -0.2
CPSF1-211ENST00000533492 CBFBQ13951 182 aa13.82□□□□□ -0.2
CPSF1-211ENST00000533492 MPP2Q14168 576 aa13.82□□□□□ -0.2
CPSF1-211ENST00000533492 NDUFAF6Q330K2 333 aa13.82□□□□□ -0.2
CPSF1-211ENST00000533492 TMEM176BQ3YBM2 270 aaPredicted RBP13.82□□□□□ -0.2
CPSF1-211ENST00000533492 PDZK1Q5T2W1 519 aa13.82□□□□□ -0.2
CPSF1-211ENST00000533492 ATAD3BQ5T9A4 648 aa13.82□□□□□ -0.2
CPSF1-211ENST00000533492 STK32CQ86UX6 486 aa13.82□□□□□ -0.2
CPSF1-211ENST00000533492 ANKRD46Q86W74 232 aa13.82□□□□□ -0.2
CPSF1-211ENST00000533492 ANKRD42Q8N9B4 389 aa13.82□□□□□ -0.2
CPSF1-211ENST00000533492 TOR1AIP2Q8NFQ8 470 aa13.82□□□□□ -0.2
CPSF1-211ENST00000533492 OR5W2Q8NH69 310 aa13.82□□□□□ -0.2
CPSF1-211ENST00000533492 GPR119Q8TDV5 335 aa13.82□□□□□ -0.2
CPSF1-211ENST00000533492 ROBO4Q8WZ75 1007 aa13.82□□□□□ -0.2
CPSF1-211ENST00000533492 PNPOQ9NVS9 261 aa13.82□□□□□ -0.2
CPSF1-211ENST00000533492 A0A1W2PPR1 153 aa13.81□□□□□ -0.2
CPSF1-211ENST00000533492 SERINC4A6NH21 518 aa13.81□□□□□ -0.2
CPSF1-211ENST00000533492 AGR2O95994 175 aa13.81□□□□□ -0.2
CPSF1-211ENST00000533492 UQCRC2P22695 453 aa13.81□□□□□ -0.2
CPSF1-211ENST00000533492 SHC1P29353 583 aa13.81□□□□□ -0.2
CPSF1-211ENST00000533492 CCKARP32238 428 aa13.81□□□□□ -0.2
CPSF1-211ENST00000533492 S100A3P33764 101 aa13.81□□□□□ -0.2
CPSF1-211ENST00000533492 CLNS1AP54105 237 aaKnown RBP13.81□□□□□ -0.2
CPSF1-211ENST00000533492 BST1Q10588 318 aa13.81□□□□□ -0.2
CPSF1-211ENST00000533492 TOMM34Q15785 309 aaPredicted RBP13.81□□□□□ -0.2
CPSF1-211ENST00000533492 DPY19L1Q2PZI1 675 aa13.81□□□□□ -0.2
CPSF1-211ENST00000533492 ARHGAP11BQ3KRB8 267 aa13.81□□□□□ -0.2
CPSF1-211ENST00000533492 TNFAIP8L3Q5GJ75 292 aa13.81□□□□□ -0.2
CPSF1-211ENST00000533492 TMEM201Q5SNT2 666 aa13.81□□□□□ -0.2
CPSF1-211ENST00000533492 BEND4Q6ZU67 534 aa13.81□□□□□ -0.2
CPSF1-211ENST00000533492 LRRC34Q8IZ02 419 aa13.81□□□□□ -0.2
CPSF1-211ENST00000533492 XAGE5Q8WWM1 108 aa13.81□□□□□ -0.2
CPSF1-211ENST00000533492 CPNE4Q96A23 557 aaPredicted RBP13.81□□□□□ -0.2
CPSF1-211ENST00000533492 TESCQ96BS2 214 aa13.81□□□□□ -0.2
CPSF1-211ENST00000533492 MRGPRX4Q96LA9 322 aa13.81□□□□□ -0.2
CPSF1-211ENST00000533492 NMUR2Q9GZQ4 415 aa13.81□□□□□ -0.2
CPSF1-211ENST00000533492 OR51I1Q9H343 314 aa13.81□□□□□ -0.2
CPSF1-211ENST00000533492 SERHL2Q9H4I8 314 aa13.81□□□□□ -0.2
CPSF1-211ENST00000533492 C12orf49Q9H741 205 aa13.81□□□□□ -0.2
CPSF1-211ENST00000533492 HAO1Q9UJM8 370 aa13.81□□□□□ -0.2
CPSF1-211ENST00000533492 MKLN1Q9UL63 735 aa13.81□□□□□ -0.2
CPSF1-211ENST00000533492 DEFB108AA8MXU0 73 aa13.8□□□□□ -0.2
CPSF1-211ENST00000533492 EFNA2O43921 213 aa13.8□□□□□ -0.2
CPSF1-211ENST00000533492 FCMRO60667 390 aa13.8□□□□□ -0.2
CPSF1-211ENST00000533492 SCN2BO60939 215 aa13.8□□□□□ -0.2
CPSF1-211ENST00000533492 CSTAP01040 98 aa13.8□□□□□ -0.2
CPSF1-211ENST00000533492 OR12D1P0DN82 309 aa13.8□□□□□ -0.2
CPSF1-211ENST00000533492 PPP3CBP16298 524 aa13.8□□□□□ -0.2
CPSF1-211ENST00000533492 PRKCAP17252 672 aa13.8□□□□□ -0.2
CPSF1-211ENST00000533492 CD53P19397 219 aa13.8□□□□□ -0.2
CPSF1-211ENST00000533492 SLC7A1P30825 629 aa13.8□□□□□ -0.2
CPSF1-211ENST00000533492 CHI3L1P36222 383 aaPredicted RBP13.8□□□□□ -0.2
CPSF1-211ENST00000533492 ADAM8P78325 824 aa13.8□□□□□ -0.2
CPSF1-211ENST00000533492 SELENBP1Q13228 472 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms