RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 PRMT2P55345 433 aa15.43■□□□□ 0.06
CTSB-228ENST00000533455 PITPNAQ00169 270 aa15.43■□□□□ 0.06
CTSB-228ENST00000533455 ZNF85Q03923 595 aa15.43■□□□□ 0.06
CTSB-228ENST00000533455 SLC3A1Q07837 685 aa15.43■□□□□ 0.06
CTSB-228ENST00000533455 RGS1Q08116 209 aa15.43■□□□□ 0.06
CTSB-228ENST00000533455 GARNL3Q5VVW2 1013 aa15.43■□□□□ 0.06
CTSB-228ENST00000533455 BAIAP2L2Q6UXY1 529 aa15.43■□□□□ 0.06
CTSB-228ENST00000533455 WDR88Q6ZMY6 472 aa15.43■□□□□ 0.06
CTSB-228ENST00000533455 ASPGQ86U10 573 aa15.43■□□□□ 0.06
CTSB-228ENST00000533455 CMIPQ8IY22 773 aa15.43■□□□□ 0.06
CTSB-228ENST00000533455 SLC44A3Q8N4M1 653 aa15.43■□□□□ 0.06
CTSB-228ENST00000533455 FBXL6Q8N531 539 aa15.43■□□□□ 0.06
CTSB-228ENST00000533455 MRPL43Q8N983 215 aaKnown RBP15.43■□□□□ 0.06
CTSB-228ENST00000533455 OR52E1Q8NGJ3 308 aa15.43■□□□□ 0.06
CTSB-228ENST00000533455 PTP4A1Q93096 173 aa15.43■□□□□ 0.06
CTSB-228ENST00000533455 RSPRY1Q96DX4 576 aa15.43■□□□□ 0.06
CTSB-228ENST00000533455 MAP6Q96JE9 813 aa15.43■□□□□ 0.06
CTSB-228ENST00000533455 SORCS2Q96PQ0 1159 aa15.43■□□□□ 0.06
CTSB-228ENST00000533455 TEAD3Q99594 435 aa15.43■□□□□ 0.06
CTSB-228ENST00000533455 ENKD1Q9H0I2 346 aa15.43■□□□□ 0.06
CTSB-228ENST00000533455 ADGRL4Q9HBW9 690 aa15.43■□□□□ 0.06
CTSB-228ENST00000533455 ZNF275Q9NSD4 429 aaPredicted RBP15.43■□□□□ 0.06
CTSB-228ENST00000533455 GLTPQ9NZD2 209 aa15.43■□□□□ 0.06
CTSB-228ENST00000533455 SATB2Q9UPW6 733 aa15.43■□□□□ 0.06
CTSB-228ENST00000533455 MEIKINA0A087WXM9 373 aa15.42■□□□□ 0.06
CTSB-228ENST00000533455 TRAV1-2A0A0B4J238 106 aa15.42■□□□□ 0.06
CTSB-228ENST00000533455 REM1O75628 298 aa15.42■□□□□ 0.06
CTSB-228ENST00000533455 SULT1A3P0DMM9 295 aa15.42■□□□□ 0.06
CTSB-228ENST00000533455 SULT1A4P0DMN0 295 aa15.42■□□□□ 0.06
CTSB-228ENST00000533455 RAB3BP20337 219 aa15.42■□□□□ 0.06
CTSB-228ENST00000533455 HTR2AP28223 471 aa15.42■□□□□ 0.06
CTSB-228ENST00000533455 PEBP1P30086 187 aaKnown RBP15.42■□□□□ 0.06
CTSB-228ENST00000533455 HOXD11P31277 338 aaPredicted RBP15.42■□□□□ 0.06
CTSB-228ENST00000533455 NRG3P56975 720 aa15.42■□□□□ 0.06
CTSB-228ENST00000533455 FOXK2Q01167 660 aa15.42■□□□□ 0.06
CTSB-228ENST00000533455 KLHL12Q53G59 568 aa15.42■□□□□ 0.06
CTSB-228ENST00000533455 ZNF425Q6IV72 752 aa15.42■□□□□ 0.06
CTSB-228ENST00000533455 IDO2Q6ZQW0 420 aa15.42■□□□□ 0.06
CTSB-228ENST00000533455 GRASPQ7Z6J2 395 aaPredicted RBP15.42■□□□□ 0.06
CTSB-228ENST00000533455 SIAH3Q8IW03 269 aa15.42■□□□□ 0.06
CTSB-228ENST00000533455 LRRC25Q8N386 305 aaPredicted RBP15.42■□□□□ 0.06
CTSB-228ENST00000533455 MS4A15Q8N5U1 240 aa15.42■□□□□ 0.06
CTSB-228ENST00000533455 C17orf47Q8NEP4 570 aa15.42■□□□□ 0.06
CTSB-228ENST00000533455 SLC2A12Q8TD20 617 aa15.42■□□□□ 0.06
CTSB-228ENST00000533455 TMEM239Q8WW34 195 aa15.42■□□□□ 0.06
CTSB-228ENST00000533455 C4orf36Q96KX1 117 aa15.42■□□□□ 0.06
CTSB-228ENST00000533455 ZCCHC4Q9H5U6 513 aa15.42■□□□□ 0.06
CTSB-228ENST00000533455 ABRACLQ9P1F3 81 aa15.42■□□□□ 0.06
CTSB-228ENST00000533455 DEC1Q9P2X7 70 aa15.42■□□□□ 0.06
CTSB-228ENST00000533455 CENPVL1A0A0U1RR11 272 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 BTN3A3O00478 584 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 GSTZ1O43708 216 aaPredicted RBP15.41■□□□□ 0.06
CTSB-228ENST00000533455 HNRNPA1P09651 372 aaKnown RBP eCLIP15.41■□□□□ 0.06
CTSB-228ENST00000533455 UGT2B7P16662 529 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 FUT1P19526 365 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 CXCL3P19876 107 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 PTNP21246 168 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 CLDN2P57739 230 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 GSG1Q2KHT4 349 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 TMPRSS11FQ6ZWK6 438 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 BTN2A1Q7KYR7 527 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 FGD2Q7Z6J4 655 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 CDH24Q86UP0 819 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 OR2L13Q8N349 312 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 PFN4Q8NHR9 129 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 SDF2Q99470 211 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 CACNG6Q9BXT2 260 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 MFRPQ9BY79 579 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 WDR26Q9H7D7 661 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 MBNL1Q9NR56 388 aaKnown RBP15.41■□□□□ 0.06
CTSB-228ENST00000533455 C20orf141Q9NUB4 165 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 CLDND1Q9NY35 253 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 HAO2Q9NYQ3 351 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 MAT2BQ9NZL9 334 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 KCNN3Q9UGI6 736 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 TMEM5Q9Y2B1 443 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 CDHR4A6H8M9 788 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 PRR19A6NJB7 356 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 B8ZZF3 427 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 LRRN3E7EW58 273 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 ASGR2P07307 311 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 SAGP10523 405 aaPredicted RBP15.41■□□□□ 0.06
CTSB-228ENST00000533455 GIFP27352 417 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 ACTC1P68032 377 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 ACTA1P68133 377 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 DGCR2P98153 550 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 RIPPLY1Q0D2K3 151 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 DUSP5Q16690 384 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 ACSM3Q53FZ2 586 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 WDR45BQ5MNZ6 344 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 THSD4Q6ZMP0 1018 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 SFTPA1Q8IWL2 248 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 ZNF784Q8NCA9 323 aaPredicted RBP15.41■□□□□ 0.06
CTSB-228ENST00000533455 ZNF296Q8WUU4 475 aaPredicted RBP15.41■□□□□ 0.06
CTSB-228ENST00000533455 GAL3ST3Q96A11 431 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 ZNF350Q9GZX5 532 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 LRRN3Q9H3W5 708 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 KLHL1Q9NR64 748 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 UCKL1Q9NWZ5 548 aa15.41■□□□□ 0.06
CTSB-228ENST00000533455 EMC3Q9P0I2 261 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms