RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 CLIC1O00299 241 aa18.44■□□□□ 0.54
CCS-208ENST00000533244 RPS4Y1P22090 263 aaKnown RBP18.44■□□□□ 0.54
CCS-208ENST00000533244 PGM1P36871 562 aa18.44■□□□□ 0.54
CCS-208ENST00000533244 CRATP43155 626 aa18.44■□□□□ 0.54
CCS-208ENST00000533244 ARFIP2P53365 341 aa18.44■□□□□ 0.54
CCS-208ENST00000533244 SUCLG1P53597 346 aaKnown RBP18.44■□□□□ 0.54
CCS-208ENST00000533244 DSTNP60981 165 aa18.44■□□□□ 0.54
CCS-208ENST00000533244 TFF3Q07654 80 aa18.44■□□□□ 0.54
CCS-208ENST00000533244 RGNQ15493 299 aa18.44■□□□□ 0.54
CCS-208ENST00000533244 HSPB2Q16082 182 aa18.44■□□□□ 0.54
CCS-208ENST00000533244 SP5Q6BEB4 398 aaPredicted RBP18.44■□□□□ 0.54
CCS-208ENST00000533244 POMZP3Q6PJE2 187 aa18.44■□□□□ 0.54
CCS-208ENST00000533244 EIF3MQ7L2H7 374 aaKnown RBP18.44■□□□□ 0.54
CCS-208ENST00000533244 GGNQ86UU5 652 aa18.44■□□□□ 0.54
CCS-208ENST00000533244 MEIOBQ8N635 442 aa18.44■□□□□ 0.54
CCS-208ENST00000533244 C9orf106Q8NAJ2 232 aa18.44■□□□□ 0.54
CCS-208ENST00000533244 ACBD4Q8NC06 268 aa18.44■□□□□ 0.54
CCS-208ENST00000533244 OR5W2Q8NH69 310 aa18.44■□□□□ 0.54
CCS-208ENST00000533244 ZNF524Q96C55 264 aa18.44■□□□□ 0.54
CCS-208ENST00000533244 RNF145Q96MT1 663 aa18.44■□□□□ 0.54
CCS-208ENST00000533244 THUMPD1Q9NXG2 353 aaKnown RBP18.44■□□□□ 0.54
CCS-208ENST00000533244 SLC35A3Q9Y2D2 325 aa18.44■□□□□ 0.54
CCS-208ENST00000533244 HEATR5AQ86XA9 2040 aa18.44■□□□□ 0.54
CCS-208ENST00000533244 AGAP5A6NIR3 686 aa18.43■□□□□ 0.54
CCS-208ENST00000533244 H0YC42 278 aa18.43■□□□□ 0.54
CCS-208ENST00000533244 C19orf84I3L1E1 186 aa18.43■□□□□ 0.54
CCS-208ENST00000533244 NTN1O95631 604 aa18.43■□□□□ 0.54
CCS-208ENST00000533244 CSTAP01040 98 aa18.43■□□□□ 0.54
CCS-208ENST00000533244 TFPTP0C1Z6 253 aa18.43■□□□□ 0.54
CCS-208ENST00000533244 NR2F1P10589 423 aa18.43■□□□□ 0.54
CCS-208ENST00000533244 EIF1P41567 113 aaKnown RBP18.43■□□□□ 0.54
CCS-208ENST00000533244 TPD52P55327 224 aaPredicted RBP18.43■□□□□ 0.54
CCS-208ENST00000533244 CLDN20P56880 219 aa18.43■□□□□ 0.54
CCS-208ENST00000533244 FADDQ13158 208 aa18.43■□□□□ 0.54
CCS-208ENST00000533244 SLC25A53Q5H9E4 307 aa18.43■□□□□ 0.54
CCS-208ENST00000533244 METTL25Q8N6Q8 603 aa18.43■□□□□ 0.54
CCS-208ENST00000533244 WNT2BQ93097 391 aa18.43■□□□□ 0.54
CCS-208ENST00000533244 UCK2Q9BZX2 261 aa18.43■□□□□ 0.54
CCS-208ENST00000533244 QRSL1Q9H0R6 528 aaKnown RBP18.43■□□□□ 0.54
CCS-208ENST00000533244 RAD21L1Q9H4I0 556 aa18.43■□□□□ 0.54
CCS-208ENST00000533244 VAPAQ9P0L0 249 aa18.43■□□□□ 0.54
CCS-208ENST00000533244 LEF1Q9UJU2 399 aaPredicted RBP18.43■□□□□ 0.54
CCS-208ENST00000533244 CRYBG3Q68DQ2 2970 aa18.43■□□□□ 0.54
CCS-208ENST00000533244 CYSRT1A8MQ03 144 aa18.42■□□□□ 0.54
CCS-208ENST00000533244 BCAS1O75363 584 aaPredicted RBP18.42■□□□□ 0.54
CCS-208ENST00000533244 IL2RAP01589 272 aa18.42■□□□□ 0.54
CCS-208ENST00000533244 PRKCAP17252 672 aa18.42■□□□□ 0.54
CCS-208ENST00000533244 ELK4P28324 431 aa18.42■□□□□ 0.54
CCS-208ENST00000533244 ADH6P28332 368 aa18.42■□□□□ 0.54
CCS-208ENST00000533244 ZNF136P52737 540 aa18.42■□□□□ 0.54
CCS-208ENST00000533244 EEFSECP57772 596 aaKnown RBP18.42■□□□□ 0.54
CCS-208ENST00000533244 FOXF1Q12946 379 aa18.42■□□□□ 0.54
CCS-208ENST00000533244 TOMM34Q15785 309 aaPredicted RBP18.42■□□□□ 0.54
CCS-208ENST00000533244 ZNF787Q6DD87 383 aa18.42■□□□□ 0.54
CCS-208ENST00000533244 DLEU7Q6UYE1 221 aa18.42■□□□□ 0.54
CCS-208ENST00000533244 UBQLNLQ8IYU4 475 aa18.42■□□□□ 0.54
CCS-208ENST00000533244 DPP10Q8N608 796 aa18.42■□□□□ 0.54
CCS-208ENST00000533244 SLC38A5Q8WUX1 472 aa18.42■□□□□ 0.54
CCS-208ENST00000533244 ADGRG7Q96K78 797 aa18.42■□□□□ 0.54
CCS-208ENST00000533244 MTHFD2LQ9H903 347 aaPredicted RBP18.42■□□□□ 0.54
CCS-208ENST00000533244 EXOSC3Q9NQT5 275 aaKnown RBP18.42■□□□□ 0.54
CCS-208ENST00000533244 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.42■□□□□ 0.54
CCS-208ENST00000533244 CALML5Q9NZT1 146 aa18.42■□□□□ 0.54
CCS-208ENST00000533244 KLHL14Q9P2G3 628 aa18.42■□□□□ 0.54
CCS-208ENST00000533244 GPC6Q9Y625 555 aaPredicted RBP18.42■□□□□ 0.54
CCS-208ENST00000533244 NKX2-6A6NCS4 301 aa18.41■□□□□ 0.54
CCS-208ENST00000533244 FAM90A27PA6NNH2 459 aa18.41■□□□□ 0.54
CCS-208ENST00000533244 UBTFL6P0CB48 400 aaPredicted RBP18.41■□□□□ 0.54
CCS-208ENST00000533244 PPIBP23284 216 aaKnown RBP18.41■□□□□ 0.54
CCS-208ENST00000533244 RAC1P63000 192 aa18.41■□□□□ 0.54
CCS-208ENST00000533244 KCNJ10P78508 379 aa18.41■□□□□ 0.54
CCS-208ENST00000533244 CBFBQ13951 182 aa18.41■□□□□ 0.54
CCS-208ENST00000533244 CTU2Q2VPK5 515 aaKnown RBP18.41■□□□□ 0.54
CCS-208ENST00000533244 SLC25A35Q3KQZ1 300 aa18.41■□□□□ 0.54
CCS-208ENST00000533244 RETREG3Q86VR2 466 aa18.41■□□□□ 0.54
CCS-208ENST00000533244 CMIPQ8IY22 773 aa18.41■□□□□ 0.54
CCS-208ENST00000533244 ZFP3Q96NJ6 502 aa18.41■□□□□ 0.54
CCS-208ENST00000533244 TM9SF2Q99805 663 aa18.41■□□□□ 0.54
CCS-208ENST00000533244 A4GALTQ9NPC4 353 aa18.41■□□□□ 0.54
CCS-208ENST00000533244 KCNJ16Q9NPI9 418 aa18.41■□□□□ 0.54
CCS-208ENST00000533244 MRGBPQ9NV56 204 aa18.41■□□□□ 0.54
CCS-208ENST00000533244 STOML1Q9UBI4 398 aa18.41■□□□□ 0.54
CCS-208ENST00000533244 ZNF629Q9UEG4 869 aaPredicted RBP18.41■□□□□ 0.54
CCS-208ENST00000533244 NDUFAF1Q9Y375 327 aa18.41■□□□□ 0.54
CCS-208ENST00000533244 CELSR2Q9HCU4 2923 aa18.41■□□□□ 0.54
CCS-208ENST00000533244 HCFC1P51610 2035 aa18.41■□□□□ 0.54
CCS-208ENST00000533244 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 CLDN24A6NM45 220 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 SEC14L5O43304 696 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 RCBTB2O95199 551 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 NUDT14O95848 222 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 BCHEP06276 602 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 NUDT7P0C024 238 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 CRISP3P54108 245 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 DLX5P56178 289 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 QPRTQ15274 297 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 PLXDC2Q6UX71 529 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 HMGN2P46Q86SG4 172 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 C10orf111Q8N326 155 aa18.4■□□□□ 0.54
CCS-208ENST00000533244 TMCO5AQ8N6Q1 288 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms