RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 MUC15Q8N387 334 aa1.4□□□□□ -2.18
KNL1-211ENST00000533001 NUP37Q8NFH4 326 aa1.4□□□□□ -2.18
KNL1-211ENST00000533001 GPR32P1Q8NGA4 272 aa1.4□□□□□ -2.18
KNL1-211ENST00000533001 TANKQ92844 425 aa1.4□□□□□ -2.18
KNL1-211ENST00000533001 VPS39Q96JC1 886 aa1.4□□□□□ -2.18
KNL1-211ENST00000533001 MAGED4Q96JG8 741 aa1.4□□□□□ -2.18
KNL1-211ENST00000533001 GBP4Q96PP9 640 aa1.4□□□□□ -2.18
KNL1-211ENST00000533001 SDF2Q99470 211 aa1.4□□□□□ -2.18
KNL1-211ENST00000533001 SORT1Q99523 831 aa1.4□□□□□ -2.18
KNL1-211ENST00000533001 P2RX4Q99571 388 aa1.4□□□□□ -2.18
KNL1-211ENST00000533001 RBBP8Q99708 897 aa1.4□□□□□ -2.18
KNL1-211ENST00000533001 DHRS9Q9BPW9 319 aa1.4□□□□□ -2.18
KNL1-211ENST00000533001 OCSTAMPQ9BR26 566 aa1.4□□□□□ -2.18
KNL1-211ENST00000533001 CHIAQ9BZP6 476 aa1.4□□□□□ -2.18
KNL1-211ENST00000533001 ABCB10Q9NRK6 738 aa1.4□□□□□ -2.18
KNL1-211ENST00000533001 SLC25A37Q9NYZ2 338 aa1.4□□□□□ -2.18
KNL1-211ENST00000533001 LOC390937A0A1W2PQ73 354 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 OR6C76A6NM76 312 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 PHGDHO43175 533 aaKnown RBP1.4□□□□□ -2.19
KNL1-211ENST00000533001 APOA4P06727 396 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 C8GP07360 202 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 DHRS4L1P0CG22 281 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 ABOP16442 354 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 IDUAP35475 653 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 CRYBB2P43320 205 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 PPOXP50336 477 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 CCR8P51685 355 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 DLX6P56179 175 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 BTN3A2P78410 334 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 NAAAQ02083 359 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 CCNJQ5T5M9 372 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 TYW3Q6IPR3 259 aaKnown RBP1.4□□□□□ -2.19
KNL1-211ENST00000533001 KLHL17Q6TDP4 642 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 METAP1DQ6UB28 335 aaPredicted RBP1.4□□□□□ -2.19
KNL1-211ENST00000533001 FAM47EQ6ZV65 393 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 SLC46A3Q7Z3Q1 461 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 MARCH3Q86UD3 253 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 C1orf162Q8NEQ5 155 aaPredicted RBP1.4□□□□□ -2.19
KNL1-211ENST00000533001 SGMS2Q8NHU3 365 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 TRAF3IP1Q8TDR0 691 aaPredicted RBP1.4□□□□□ -2.19
KNL1-211ENST00000533001 RBMXL1Q96E39 390 aaKnown RBP1.4□□□□□ -2.19
KNL1-211ENST00000533001 CABS1Q96KC9 395 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 KCNC2Q96PR1 638 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP1.4□□□□□ -2.19
KNL1-211ENST00000533001 CBLN4Q9NTU7 201 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 NKIRAS2Q9NYR9 191 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 MED11Q9P086 117 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 CORINQ9Y5Q5 1042 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 TFECO14948 347 aaPredicted RBP1.4□□□□□ -2.19
KNL1-211ENST00000533001 SSX4O60224 188 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 CLPTM1O96005 669 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 IGLV3-1P01715 115 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 CMPK1P30085 196 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 NPY2RP49146 381 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 SELENOPP49908 381 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 DSCR4P56555 118 aaPredicted RBP1.4□□□□□ -2.19
KNL1-211ENST00000533001 EEF1A1P68104 462 aaKnown RBP1.4□□□□□ -2.19
KNL1-211ENST00000533001 HBA1P69905 142 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 CD83Q01151 205 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 TSNAXIP1Q2TAA8 658 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 GRAMD1BQ3KR37 738 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 Q6YL49 198 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 Q6ZSR3 168 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 ESPNLQ6ZVH7 1005 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 DDIASQ8IXT1 998 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 RIBC1Q8N443 379 aaPredicted RBP1.4□□□□□ -2.19
KNL1-211ENST00000533001 TTC29Q8NA56 475 aaPredicted RBP1.4□□□□□ -2.19
KNL1-211ENST00000533001 OR7G1Q8NGA0 311 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 FAM120BQ96EK7 910 aaKnown RBP1.4□□□□□ -2.19
KNL1-211ENST00000533001 MAELQ96JY0 434 aaKnown RBP1.4□□□□□ -2.19
KNL1-211ENST00000533001 ANKHQ9HCJ1 492 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 PRTFDC1Q9NRG1 225 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 FAM114A2Q9NRY5 505 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 UTP6Q9NYH9 597 aaKnown RBP1.4□□□□□ -2.19
KNL1-211ENST00000533001 RHBDD3Q9Y3P4 386 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 LOC100289279A0A1B0GTE1 492 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 A0A1W2PNR3 127 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 A8MT66 165 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 AP3D1O14617 1153 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 ERN1O75460 977 aaKnown RBP1.4□□□□□ -2.19
KNL1-211ENST00000533001 LYZL6O75951 148 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 CATP04040 527 aaKnown RBP1.4□□□□□ -2.19
KNL1-211ENST00000533001 OR56A5P0C7T3 313 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 TRIM21P19474 475 aaKnown RBP1.4□□□□□ -2.19
KNL1-211ENST00000533001 PIK3CGP48736 1102 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 SNX16P57768 344 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 MRPS22P82650 360 aaKnown RBP1.4□□□□□ -2.19
KNL1-211ENST00000533001 SLC18A2Q05940 514 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 BTKQ06187 659 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 DHX34Q14147 1143 aaKnown RBP1.4□□□□□ -2.19
KNL1-211ENST00000533001 ZMYND11Q15326 602 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 TOR1AIP1Q5JTV8 583 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 OR4C11Q6IEV9 310 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 BLOC1S3Q6QNY0 202 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 ANGPTL8Q6UXH0 198 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 FAM122BQ7Z309 247 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 OR9A2Q8NGT5 310 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 DUSP19Q8WTR2 217 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 MOGAT1Q96PD6 335 aa1.4□□□□□ -2.19
KNL1-211ENST00000533001 DUSP22Q9NRW4 184 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms