RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 MAGIXQ9H6Y5 334 aa13.05□□□□□ -0.32
COL16A1-217ENST00000532877 EXOSC3Q9NQT5 275 aaKnown RBP13.05□□□□□ -0.32
COL16A1-217ENST00000532877 DEPPQ9NTK1 212 aa13.05□□□□□ -0.32
COL16A1-217ENST00000532877 PPP4R1LQ9P1A2 415 aa13.05□□□□□ -0.32
COL16A1-217ENST00000532877 AURKCQ9UQB9 309 aa13.05□□□□□ -0.32
COL16A1-217ENST00000532877 SLC9A8Q9Y2E8 581 aa13.05□□□□□ -0.32
COL16A1-217ENST00000532877 CARD8Q9Y2G2 431 aa13.05□□□□□ -0.32
COL16A1-217ENST00000532877 PCDHGB7Q9Y5F8 929 aa13.05□□□□□ -0.32
COL16A1-217ENST00000532877 USP9YO00507 2555 aaPredicted RBP13.04□□□□□ -0.32
COL16A1-217ENST00000532877 IGLV3-32A0A0A0MS00 114 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 B4DXG7 233 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 SNPHO15079 494 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 NME2P1O60361 137 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 EIF4E2O60573 245 aaKnown RBP13.04□□□□□ -0.32
COL16A1-217ENST00000532877 ADAM11O75078 769 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 CYP7B1O75881 506 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 SNX4O95219 450 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 SP1P08047 785 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 GKN3PP0CG01 181 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 PRG2P13727 222 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 CD46P15529 392 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 NME2P22392 152 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 DNASE1L1P49184 302 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 GPR85P60893 370 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 ELF3P78545 371 aaPredicted RBP13.04□□□□□ -0.32
COL16A1-217ENST00000532877 VLDLRP98155 873 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 CHRNB3Q05901 458 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 C17orf67Q0P5P2 114 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 NPTX1Q15818 432 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 LINC00303Q3SY05 128 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 FAM98BQ52LJ0 330 aaKnown RBP13.04□□□□□ -0.32
COL16A1-217ENST00000532877 COLEC12Q5KU26 742 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 OR5M10Q6IEU7 315 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 SLC25A25Q6KCM7 469 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 RBM45Q8IUH3 476 aaKnown RBP13.04□□□□□ -0.32
COL16A1-217ENST00000532877 ZADH2Q8N4Q0 377 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 CATSPER1Q8NEC5 780 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 OR6T1Q8NGN1 323 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 DUSP19Q8WTR2 217 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 PYDC1Q8WXC3 89 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 SLC35B4Q969S0 331 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 SLCO4A1Q96BD0 722 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 SCMH1Q96GD3 660 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 ABHD17AQ96GS6 310 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 TMEM41AQ96HV5 264 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 LAT2Q9GZY6 243 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 EVA1AQ9H8M9 152 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 KLHL1Q9NR64 748 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 SDHAF3Q9NRP4 125 aa13.04□□□□□ -0.32
COL16A1-217ENST00000532877 CCM2LQ9NUG4 571 aaPredicted RBP13.04□□□□□ -0.32
COL16A1-217ENST00000532877 RRP15Q9Y3B9 282 aaKnown RBP13.04□□□□□ -0.32
COL16A1-217ENST00000532877 TRAV17A0A0B4J275 112 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 K7EM74 188 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 TRIM3O75382 744 aaPredicted RBP13.03□□□□□ -0.32
COL16A1-217ENST00000532877 MT-ND1P03886 318 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 IFNW1P05000 195 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 FABP3P05413 133 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 RAP2AP10114 183 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 CNR1P21554 472 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 SLC7A1P30825 629 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 ACAA2P42765 397 aaKnown RBP13.03□□□□□ -0.32
COL16A1-217ENST00000532877 MAGEA2P43356 314 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 CCR4P51679 360 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 ZNF136P52737 540 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 HOXC5Q00444 222 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 EPS8Q12929 822 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 KCNAB2Q13303 367 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 INPP5JQ15735 1006 aaPredicted RBP13.03□□□□□ -0.32
COL16A1-217ENST00000532877 ZNF766Q5HY98 468 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 ZNF550Q7Z398 422 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 GALNTL5Q7Z4T8 443 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 PACS2Q86VP3 889 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 ZNF440Q8IYI8 595 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 WDSUB1Q8N9V3 476 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 TOR1AIP2Q8NFQ8 470 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 OR2M7Q8NG81 312 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 B4GALNT2Q8NHY0 566 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 DUS3LQ96G46 650 aaKnown RBP13.03□□□□□ -0.32
COL16A1-217ENST00000532877 C7orf34Q96L11 122 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 ZNF597Q96LX8 424 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 KLHDC3Q9BQ90 382 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 FAM173AQ9BQD7 235 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 AMBRA1Q9C0C7 1298 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 HHATLQ9HCP6 504 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 IL1RAPQ9NPH3 570 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 TESQ9UGI8 421 aaKnown RBP13.03□□□□□ -0.32
COL16A1-217ENST00000532877 ICAM5Q9UMF0 924 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 TP53TG5Q9Y2B4 290 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 KLF13Q9Y2Y9 288 aaPredicted RBP13.03□□□□□ -0.32
COL16A1-217ENST00000532877 SPTAN1Q13813 2472 aaKnown RBP13.03□□□□□ -0.32
COL16A1-217ENST00000532877 PCNX3Q9H6A9 2034 aa13.03□□□□□ -0.32
COL16A1-217ENST00000532877 NBASA2RRP1 2371 aa13.02□□□□□ -0.32
COL16A1-217ENST00000532877 PINLYPA6NC86 204 aa13.02□□□□□ -0.33
COL16A1-217ENST00000532877 LRRC3CA6NJW4 275 aa13.02□□□□□ -0.33
COL16A1-217ENST00000532877 H0YHG0 523 aa13.02□□□□□ -0.33
COL16A1-217ENST00000532877 hCG_2039718K7EN88 272 aa13.02□□□□□ -0.33
COL16A1-217ENST00000532877 AP3D1O14617 1153 aa13.02□□□□□ -0.33
COL16A1-217ENST00000532877 GNB5O14775 395 aa13.02□□□□□ -0.33
COL16A1-217ENST00000532877 PEX1O43933 1283 aa13.02□□□□□ -0.33
COL16A1-217ENST00000532877 GMFGO60234 142 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms