RNA–Protein interactions for RNA: ENST00000532785.1

LMO7-222, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-222	ENST00000532785	OR52I1	Q8NGK6	324 aa		4.24	□□□□□ -1.73
LMO7-222	ENST00000532785	RDH5	Q92781	318 aa		4.24	□□□□□ -1.73
LMO7-222	ENST00000532785	SAMD8	Q96LT4	415 aa		4.24	□□□□□ -1.73
LMO7-222	ENST00000532785	CYP2S1	Q96SQ9	504 aa		4.24	□□□□□ -1.73
LMO7-222	ENST00000532785	MCHR1	Q99705	422 aa		4.24	□□□□□ -1.73
LMO7-222	ENST00000532785	VAT1L	Q9HCJ6	419 aa		4.24	□□□□□ -1.73
LMO7-222	ENST00000532785	RNF103-CHMP3	A0A140T963	221 aa		4.23	□□□□□ -1.73
LMO7-222	ENST00000532785	ZNF705E	A8MWA4	302 aa	Predicted RBP	4.23	□□□□□ -1.73
LMO7-222	ENST00000532785	MT-ND3	P03897	115 aa		4.23	□□□□□ -1.73
LMO7-222	ENST00000532785	ALOX5	P09917	674 aa		4.23	□□□□□ -1.73
LMO7-222	ENST00000532785	NMT1	P30419	496 aa	Known RBP	4.23	□□□□□ -1.73
LMO7-222	ENST00000532785	PPOX	P50336	477 aa		4.23	□□□□□ -1.73
LMO7-222	ENST00000532785	ATXN7L3	Q14CW9	347 aa	Predicted RBP	4.23	□□□□□ -1.73
LMO7-222	ENST00000532785	NSDHL	Q15738	373 aa		4.23	□□□□□ -1.73
LMO7-222	ENST00000532785	ADPRM	Q3LIE5	342 aa		4.23	□□□□□ -1.73
LMO7-222	ENST00000532785	RNF165	Q6ZSG1	346 aa		4.23	□□□□□ -1.73
LMO7-222	ENST00000532785	VRK2	Q86Y07	508 aa		4.23	□□□□□ -1.73
LMO7-222	ENST00000532785	SUMF2	Q8NBJ7	301 aa		4.23	□□□□□ -1.73
LMO7-222	ENST00000532785	MYDGF	Q969H8	173 aa		4.23	□□□□□ -1.73
LMO7-222	ENST00000532785	GSDMC	Q9BYG8	508 aa		4.23	□□□□□ -1.73
LMO7-222	ENST00000532785	SRXN1	Q9BYN0	137 aa		4.23	□□□□□ -1.73
LMO7-222	ENST00000532785	POLR2J2	Q9GZM3	115 aa	Known RBP	4.23	□□□□□ -1.73
LMO7-222	ENST00000532785	POLR2J3	Q9H1A7	115 aa	Known RBP	4.23	□□□□□ -1.73
LMO7-222	ENST00000532785	MMP26	Q9NRE1	261 aa		4.23	□□□□□ -1.73
LMO7-222	ENST00000532785	SOHLH2	Q9NX45	425 aa		4.23	□□□□□ -1.73
LMO7-222	ENST00000532785	SLCO1B1	Q9Y6L6	691 aa		4.23	□□□□□ -1.73
LMO7-222	ENST00000532785	TTC21B	Q7Z4L5	1316 aa		4.22	□□□□□ -1.73
LMO7-222	ENST00000532785	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	4.22	□□□□□ -1.73
LMO7-222	ENST00000532785	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	4.22	□□□□□ -1.73
LMO7-222	ENST00000532785		H3BMQ9	156 aa		4.22	□□□□□ -1.73
LMO7-222	ENST00000532785	RASGRF2	O14827	1237 aa		4.22	□□□□□ -1.73
LMO7-222	ENST00000532785	IGHV4-34	P06331	123 aa		4.22	□□□□□ -1.73
LMO7-222	ENST00000532785	RAET1G	Q6H3X3	334 aa		4.22	□□□□□ -1.73
LMO7-222	ENST00000532785	APTX	Q7Z2E3	356 aa	Known RBP	4.22	□□□□□ -1.73
LMO7-222	ENST00000532785	MISP	Q8IVT2	679 aa		4.22	□□□□□ -1.73
LMO7-222	ENST00000532785	MTURN	Q8N3F0	131 aa		4.22	□□□□□ -1.73
LMO7-222	ENST00000532785	OR5AU1	Q8NGC0	362 aa		4.22	□□□□□ -1.73
LMO7-222	ENST00000532785	NEIL3	Q8TAT5	605 aa		4.22	□□□□□ -1.73
LMO7-222	ENST00000532785	VPS35	Q96QK1	796 aa		4.22	□□□□□ -1.73
LMO7-222	ENST00000532785	RNF126	Q9BV68	326 aa		4.22	□□□□□ -1.73
LMO7-222	ENST00000532785	MAGT1	Q9H0U3	335 aa		4.22	□□□□□ -1.73
LMO7-222	ENST00000532785	NXF3	Q9H4D5	531 aa	Known RBP	4.22	□□□□□ -1.73
LMO7-222	ENST00000532785	ANAPC7	Q9UJX3	599 aa		4.22	□□□□□ -1.73
LMO7-222	ENST00000532785	ZNF223	Q9UK11	482 aa	Predicted RBP	4.22	□□□□□ -1.73
LMO7-222	ENST00000532785	CUX2	O14529	1486 aa		4.22	□□□□□ -1.73
LMO7-222	ENST00000532785	TRBV6-6	A0A0A6YYG2	114 aa		4.21	□□□□□ -1.74
LMO7-222	ENST00000532785		A8MUA0	341 aa		4.21	□□□□□ -1.74
LMO7-222	ENST00000532785	INS	P01308	110 aa		4.21	□□□□□ -1.74
LMO7-222	ENST00000532785	PAICS	P22234	425 aa	Known RBP	4.21	□□□□□ -1.74
LMO7-222	ENST00000532785	CALB2	P22676	271 aa		4.21	□□□□□ -1.74
LMO7-222	ENST00000532785	CCNC	P24863	283 aa		4.21	□□□□□ -1.74
LMO7-222	ENST00000532785	HTR1F	P30939	366 aa		4.21	□□□□□ -1.74
LMO7-222	ENST00000532785	NUDT1	P36639	197 aa		4.21	□□□□□ -1.74
LMO7-222	ENST00000532785	DLST	P36957	453 aa		4.21	□□□□□ -1.74
LMO7-222	ENST00000532785	BDKRB1	P46663	353 aa		4.21	□□□□□ -1.74
LMO7-222	ENST00000532785	ATXN3	P54252	364 aa	Predicted RBP	4.21	□□□□□ -1.74
LMO7-222	ENST00000532785	PAGE3	Q5JUK9	113 aa		4.21	□□□□□ -1.74
LMO7-222	ENST00000532785	RAB12	Q6IQ22	244 aa		4.21	□□□□□ -1.74
LMO7-222	ENST00000532785	UNQ9370/PRO34162	Q6UXP9	181 aa		4.21	□□□□□ -1.74
LMO7-222	ENST00000532785	RBM43	Q6ZSC3	357 aa	Known RBP	4.21	□□□□□ -1.74
LMO7-222	ENST00000532785	CENPU	Q71F23	418 aa		4.21	□□□□□ -1.74
LMO7-222	ENST00000532785	TMEM17	Q86X19	198 aa		4.21	□□□□□ -1.74
LMO7-222	ENST00000532785	ZNF786	Q8N393	782 aa		4.21	□□□□□ -1.74
LMO7-222	ENST00000532785	BLOC1S5	Q8TDH9	187 aa		4.21	□□□□□ -1.74
LMO7-222	ENST00000532785	DUSP16	Q9BY84	665 aa		4.21	□□□□□ -1.74
LMO7-222	ENST00000532785	WSB1	Q9Y6I7	421 aa		4.21	□□□□□ -1.74
LMO7-222	ENST00000532785	SPACA6	W5XKT8	324 aa		4.21	□□□□□ -1.74
LMO7-222	ENST00000532785	PSMB11	A5LHX3	300 aa		4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	HELT	A6NFD8	242 aa		4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	SULT2B1	O00204	365 aa		4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	NPIPB7	O75200	414 aa		4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	SNAPIN	O95295	136 aa		4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	CSF2	P04141	144 aa		4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	STMN1	P16949	149 aa		4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	KIF5B	P33176	963 aa		4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	CTRL	P40313	264 aa		4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	ASMT	P46597	345 aa		4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	PLK1	P53350	603 aa		4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	CSNK1G2	P78368	415 aa		4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	HSF2	Q03933	536 aa		4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	CHRNB3	Q05901	458 aa		4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	SPP2	Q13103	211 aa		4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	EBI3	Q14213	229 aa		4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	LAGE3	Q14657	143 aa		4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	TRIP10	Q15642	601 aa		4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	MAPK6	Q16659	721 aa		4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	DNAJC21	Q5F1R6	531 aa	Known RBP	4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	ASPHD2	Q6ICH7	369 aa		4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	ACSM5	Q6NUN0	579 aa		4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	FAHD2B	Q6P2I3	314 aa	Predicted RBP	4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	CBWD2	Q8IUF1	395 aa		4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	CCDC47	Q96A33	483 aa	Known RBP	4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	FAHD2A	Q96GK7	314 aa		4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	AKR1E2	Q96JD6	320 aa		4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	PATZ1	Q9HBE1	687 aa	Known RBP	4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	CYTL1	Q9NRR1	136 aa		4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	ZNF225	Q9UK10	706 aa		4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	PRPF19	Q9UMS4	504 aa	Known RBP	4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	MGAT4B	Q9UQ53	548 aa		4.2	□□□□□ -1.74
LMO7-222	ENST00000532785	OARD1	Q9Y530	152 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms