RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 ARHGEF35A5YM69 484 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 SNTNA6NMZ2 147 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 KRTAP9-6A8MVA2 160 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 FOXE1O00358 373 aaPredicted RBP2.31□□□□□ -2.04
CD44-234ENST00000531873 TPST2O60704 377 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 GALR3O60755 368 aaPredicted RBP2.31□□□□□ -2.04
CD44-234ENST00000531873 SCRG1O75711 98 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 IGHV3-13P01766 116 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 IGHG4P01861 327 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 ALOX5P09917 674 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 DBTP11182 482 aaKnown RBP2.31□□□□□ -2.04
CD44-234ENST00000531873 FOLR2P14207 255 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 POU2F1P14859 743 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 BCL3P20749 454 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 IGHV1-2P23083 117 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 MT3P25713 68 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 IL2RGP31785 369 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 ELK3P41970 407 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 STARP49675 285 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 CEBPDP49716 269 aaPredicted RBP2.31□□□□□ -2.04
CD44-234ENST00000531873 EFNB2P52799 333 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 HMGCS2P54868 508 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 SEC61GP60059 68 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 OTUD4Q01804 1114 aaKnown RBP2.31□□□□□ -2.04
CD44-234ENST00000531873 CUL1Q13616 776 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 CRMP1Q14194 572 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 MESDQ14696 234 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 KCTD21Q4G0X4 260 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 TEX44Q53QW1 395 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 SFT2D3Q587I9 215 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 PDZK1Q5T2W1 519 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 MEDAGQ5VYS4 303 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 OR4F3Q6IEY1 312 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 GCNT7Q6ZNI0 430 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 SLC25A42Q86VD7 318 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 ERICH1Q86X53 443 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 C9orf40Q8IXQ3 194 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 CLEC4FQ8N1N0 589 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 DHRSXQ8N5I4 330 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 CSNK1A1LQ8N752 337 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 MFSD9Q8NBP5 474 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 MAPK1IP1LQ8NDC0 245 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 OR56B2PQ8NGI1 322 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 AENQ8WTP8 325 aaKnown RBP2.31□□□□□ -2.04
CD44-234ENST00000531873 NR4A3Q92570 626 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 CELF6Q96J87 481 aaKnown RBP2.31□□□□□ -2.04
CD44-234ENST00000531873 CCNL2Q96S94 520 aaPredicted RBP2.31□□□□□ -2.04
CD44-234ENST00000531873 SOSTQ9BQB4 213 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 TRIM51Q9BSJ1 452 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 RHBGQ9H310 441 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 PPDPFQ9H3Y8 114 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 VCPKMTQ9H867 229 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 PNO1Q9NRX1 252 aaKnown RBP2.31□□□□□ -2.04
CD44-234ENST00000531873 IMPAD1Q9NX62 359 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 CLEC5AQ9NY25 188 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 RIMS3Q9UJD0 308 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 ADAM28Q9UKQ2 775 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 ANGPTL2Q9UKU9 493 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 MOB4Q9Y3A3 225 aa2.31□□□□□ -2.04
CD44-234ENST00000531873 AK6Q9Y3D8 172 aaKnown RBP2.31□□□□□ -2.04
CD44-234ENST00000531873 IGHV2-70DA0A0C4DH43 119 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 LOC100131303A0A0U1RQF7 123 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 A0A0U1RQS6 177 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 HELTA6NFD8 242 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 OR52A4PA6NMU1 304 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 CCDC169A6NNP5 214 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 ZNF705EA8MWA4 302 aaPredicted RBP2.3□□□□□ -2.04
CD44-234ENST00000531873 E9PAM4 449 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 E9PQ18 207 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 K7ENP7 123 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 PRKAB2O43741 272 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 TIMM8AO60220 97 aaPredicted RBP2.3□□□□□ -2.04
CD44-234ENST00000531873 TSC22D2O75157 780 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 LRATO95237 230 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 GJB5O95377 273 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 TSPAN12O95859 305 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 TPM2P07951 284 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 UQCRFS1P1P0C7P4 283 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 CAPN2P17655 700 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 GDI1P31150 447 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 UGT1A5P35504 534 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 MAGEA8P43361 318 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 HLCSP50747 726 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 HSPA2P54652 639 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 ACTR3P61158 418 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 RPS14P62263 151 aaKnown RBP2.3□□□□□ -2.04
CD44-234ENST00000531873 CCNA1P78396 465 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 PAX2Q02962 417 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 BST1Q10588 318 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 RUNX3Q13761 415 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 KCNJ11Q14654 390 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 TGIF1Q15583 401 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 OTUD3Q5T2D3 398 aaPredicted RBP2.3□□□□□ -2.04
CD44-234ENST00000531873 ATL3Q6DD88 541 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 UQCC3Q6UW78 93 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 METTL7BQ6UX53 244 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 ZNF600Q6ZNG1 722 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 DHDDSQ86SQ9 333 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 SLC22A9Q8IVM8 553 aa2.3□□□□□ -2.04
CD44-234ENST00000531873 NAXDQ8IW45 347 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms