RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 SPOUT1Q5T280 376 aaKnown RBP2.91□□□□□ -1.94
PTPRK-220ENST00000531466 LINC00242Q5T6M2 205 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 IL23RQ5VWK5 629 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 MLIPQ5VWP3 458 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 PLCXD3Q63HM9 321 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 OR4A47Q6IF82 309 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 C3orf33Q6P1S2 294 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 TTC27Q6P3X3 843 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 IGFL2Q6UWQ7 119 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 ZBTB49Q6ZSB9 765 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 ZNF410Q86VK4 478 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 SLC13A5Q86YT5 568 aaPredicted RBP2.91□□□□□ -1.94
PTPRK-220ENST00000531466 ZDHHC21Q8IVQ6 265 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 CENPLQ8N0S6 344 aaPredicted RBP2.91□□□□□ -1.94
PTPRK-220ENST00000531466 FAM58AQ8N1B3 248 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 SNX31Q8N9S9 440 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 OR7G1Q8NGA0 311 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 OR52E1Q8NGJ3 308 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 OR6Q1Q8NGQ2 317 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 FLVCR1-AS1Q8TAF5 88 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 DTX3LQ8TDB6 740 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 CKAP2Q8WWK9 683 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 NELFBQ8WX92 580 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 ESR2Q92731 530 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 KIAA1143Q96AT1 154 aaPredicted RBP2.91□□□□□ -1.94
PTPRK-220ENST00000531466 RMND5BQ96G75 393 aaPredicted RBP2.91□□□□□ -1.94
PTPRK-220ENST00000531466 TAAR6Q96RI8 345 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 ZNF607Q96SK3 696 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 CPNE1Q99829 537 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 BPIFA3Q9BQP9 254 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 TMEM175Q9BSA9 504 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 TUBGCP2Q9BSJ2 902 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 FICDQ9BVA6 458 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 NUP58Q9BVL2 599 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 PAPOLGQ9BWT3 736 aaKnown RBP2.91□□□□□ -1.94
PTPRK-220ENST00000531466 NLNQ9BYT8 704 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 MFFQ9GZY8 342 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 DDX47Q9H0S4 455 aaKnown RBP2.91□□□□□ -1.94
PTPRK-220ENST00000531466 RPF1Q9H9Y2 349 aaKnown RBP2.91□□□□□ -1.94
PTPRK-220ENST00000531466 FN3KRPQ9HA64 309 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 CYP3A43Q9HB55 503 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 SLC40A1Q9NP59 571 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 MYOZ2Q9NPC6 264 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 C19orf12Q9NSK7 152 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 PNPLA3Q9NST1 481 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 MRPL22Q9NWU5 206 aaKnown RBP2.91□□□□□ -1.94
PTPRK-220ENST00000531466 ELOVL2Q9NXB9 296 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 ABCG2Q9UNQ0 655 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 ENTPD4Q9Y227 616 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 AP3M1Q9Y2T2 418 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 MFHAS1Q9Y4C4 1052 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 PFASO15067 1338 aa2.91□□□□□ -1.94
PTPRK-220ENST00000531466 PLB1Q6P1J6 1458 aa2.9□□□□□ -1.94
PTPRK-220ENST00000531466 WDR7Q9Y4E6 1490 aa2.9□□□□□ -1.94
PTPRK-220ENST00000531466 CPDO75976 1380 aa2.9□□□□□ -1.94
PTPRK-220ENST00000531466 C13orf42A0A1B0GVH6 325 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 OR52A4PA6NMU1 304 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 TNNC2P02585 160 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 PROS1P07225 676 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 KRT16P08779 473 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 IRF2P14316 349 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 TNNI3P19429 210 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 SRMP19623 302 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 ATP6V1C1P21283 382 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 CCNE1P24864 410 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 EDNRAP25101 427 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 ATP5C1P36542 298 aaKnown RBP2.9□□□□□ -1.95
PTPRK-220ENST00000531466 SLC26A3P40879 764 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 FRKP42685 505 aaPredicted RBP2.9□□□□□ -1.95
PTPRK-220ENST00000531466 KIR3DL2P43630 455 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 LHX1P48742 406 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 GMPSP49915 693 aaPredicted RBP2.9□□□□□ -1.95
PTPRK-220ENST00000531466 SERPINB9P50453 376 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 CCNG1P51959 295 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 PLK1P53350 603 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 MAPK12P53778 367 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 UCP2P55851 309 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 KRTAP10-10P60014 251 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 POLR2LP62875 67 aaKnown RBP2.9□□□□□ -1.95
PTPRK-220ENST00000531466 REEP5Q00765 189 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 CACNG1Q06432 222 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 ZNF33BQ06732 778 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 TGM3Q08188 693 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 SLAQ13239 276 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 GCKRQ14397 625 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 HEPACAMQ14CZ8 416 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 STX1AQ16623 288 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 PPP1R3AQ16821 1122 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 CDO1Q16878 200 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 WHAMMP3Q1A5X7 153 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 HSDL1Q3SXM5 330 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 TIMM50Q3ZCQ8 353 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 PHYHD1Q5SRE7 291 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 SULT1C3Q6IMI6 304 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 MFSD12Q6NUT3 480 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 PRMT9Q6P2P2 845 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 SYT10Q6XYQ8 523 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 WDR88Q6ZMY6 472 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 PLEKHG7Q6ZR37 379 aa2.9□□□□□ -1.95
PTPRK-220ENST00000531466 COPS6Q7L5N1 327 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms