RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 HAS2Q92819 552 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 C5orf34Q96MH7 638 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 SIGLEC12Q96PQ1 595 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 TRIM2Q9C040 744 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 DSN1Q9H410 356 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 REEP1Q9H902 201 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 NMNAT1Q9HAN9 279 aaPredicted RBP7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 SH2D2AQ9NP31 389 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 EXOSC3Q9NQT5 275 aaKnown RBP7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 KLHL1Q9NR64 748 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 AGPAT4Q9NRZ5 378 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 MED11Q9P086 117 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 TESQ9UGI8 421 aaKnown RBP7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 RIMS3Q9UJD0 308 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 TMCC3Q9ULS5 477 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 SAMHD1Q9Y3Z3 626 aaKnown RBP7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 WIF1Q9Y5W5 379 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 U3KQV3 271 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 TRAPPC13A5PLN9 417 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 ANKRD33BA6NCL7 494 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 SAC3D1A6NKF1 404 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 TAF4O00268 1085 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 FFAR1O14842 300 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 ADAMDEC1O15204 470 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 FMO6PO60774 539 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 SLC25A12O75746 678 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 CEACAM4O75871 244 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 NEURL1O76050 574 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 OR5F1O95221 314 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 GADD45GO95257 159 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 H1F0P07305 194 aaKnown RBP7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 SP1P08047 785 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 GP1BBP13224 206 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 PGCP20142 388 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 HTR2AP28223 471 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 PTGDSP41222 190 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 DNASE1L1P49184 302 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 ARHGDIAP52565 204 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 GPR85P60893 370 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 PLAURQ03405 335 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 ST3GAL3Q11203 375 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 CBFBQ13951 182 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 TRAM2Q15035 370 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 TOMM20Q15388 145 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 TRIP10Q15642 601 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 INPP5JQ15735 1006 aaPredicted RBP7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 SNCBQ16143 134 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 TBR1Q16650 682 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 IQCCQ4KMZ1 466 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 FGD3Q5JSP0 725 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 COLEC12Q5KU26 742 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 WBP2NLQ6ICG8 309 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 TMEM81Q6P7N7 255 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 GDF7Q7Z4P5 450 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 ZNF227Q86WZ6 799 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 PLCZ1Q86YW0 608 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 PIK3C3Q8NEB9 887 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 CATSPER1Q8NEC5 780 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 FAM71CQ8NEG0 241 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 OR1J4Q8NGS1 313 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 GPR119Q8TDV5 335 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 PHF10Q8WUB8 498 aaKnown RBP7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 RNF138Q8WVD3 245 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 TM9SF4Q92544 642 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 SDCCAG3Q96C92 435 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 SLC41A3Q96GZ6 507 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 PRRC1Q96M27 445 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 RNF32Q9H0A6 362 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 PTGES2Q9H7Z7 377 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 STOML1Q9UBI4 398 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 ICAM5Q9UMF0 924 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 A4GNTQ9UNA3 340 aa7.76□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 A0A087WV48 116 aa7.75□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 A0A0G2JMM0 328 aa7.75□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 A0A1B0GWA3 101 aa7.75□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 A0A1W2PPB8 328 aa7.75□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 A0A1W2PRS3 328 aa7.75□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 TMEM8BA6NDV4 472 aa7.75□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 ANKUB1A6NFN9 424 aa7.75□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 KIR3DP1A8MWS1 328 aa7.75□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 G3V2T6 193 aa7.75□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 MKRN2OSH3BPM6 223 aa7.75□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 KLRC4-KLRK1H3BQV0 150 aa7.75□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 ADAM10O14672 748 aa7.75□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 PEX1O43933 1283 aa7.75□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 ADAM11O75078 769 aa7.75□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 SEMA7AO75326 666 aa7.75□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 ZNF23P17027 643 aa7.75□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 CCNA2P20248 432 aa7.75□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 TCEA1P23193 301 aaKnown RBP7.75□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 DNAJA1P31689 397 aaKnown RBP7.75□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 ZNF41P51814 821 aaPredicted RBP7.75□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 IST1P53990 364 aa7.75□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 SUMO3P55854 103 aaPredicted RBP7.75□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 KCNAB2Q13303 367 aa7.75□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 QPRTQ15274 297 aa7.75□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 TOMM34Q15785 309 aaPredicted RBP7.75□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 LRRC36Q1X8D7 754 aa7.75□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 EXOC3L2Q2M3D2 409 aa7.75□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 ZNF766Q5HY98 468 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms