RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 TNFSF13O75888 250 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 SMNDC1O75940 238 aaKnown RBP eCLIP8.63□□□□□ -1.03
CHD7-208ENST00000528280 LINGO3P0C6S8 592 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 DNASE1P24855 282 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 KIR2DL2P43627 348 aaPredicted RBP8.63□□□□□ -1.03
CHD7-208ENST00000528280 CTBP2P56545 445 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 CLDN20P56880 219 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 GNA13Q14344 377 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 RNPS1Q15287 305 aaKnown RBP8.63□□□□□ -1.03
CHD7-208ENST00000528280 ZNF141Q15928 474 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 AGBL2Q5U5Z8 902 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 HBMQ6B0K9 141 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 HEPHL1Q6MZM0 1159 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 EIF3MQ7L2H7 374 aaKnown RBP8.63□□□□□ -1.03
CHD7-208ENST00000528280 ZAR1Q86SH2 424 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 STK32CQ86UX6 486 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 CLECL1Q8IZS7 167 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 GCNT2Q8N0V5 402 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 GATSQ8NAP1 163 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 OR5W2Q8NH69 310 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 OR5AK3PQ8NH89 298 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 OR2V1Q8NHB1 315 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 FNDC9Q8TBE3 224 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 PIWIL2Q8TC59 973 aaKnown RBP8.63□□□□□ -1.03
CHD7-208ENST00000528280 MGARPQ8TDB4 240 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 GPR119Q8TDV5 335 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 XAGE5Q8WWM1 108 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 SMPDL3BQ92485 455 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 FIG4Q92562 907 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 OSTF1Q92882 214 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 TLCD1Q96CP7 247 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 ARSGQ96EG1 525 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 NEURL3Q96EH8 262 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 SH3YL1Q96HL8 342 aaPredicted RBP8.63□□□□□ -1.03
CHD7-208ENST00000528280 GMPPAQ96IJ6 420 aaPredicted RBP8.63□□□□□ -1.03
CHD7-208ENST00000528280 RNF145Q96MT1 663 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 CCDC115Q96NT0 180 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 OR52E6Q96RD3 313 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 PANX1Q96RD7 426 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 TACO1Q9BSH4 297 aaKnown RBP8.63□□□□□ -1.03
CHD7-208ENST00000528280 LAT2Q9GZY6 243 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 GP6Q9HCN6 339 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 AIG1Q9NVV5 245 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 GALNT8Q9NY28 637 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 ZNF226Q9NYT6 803 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 MARCOQ9UEW3 520 aaPredicted RBP8.63□□□□□ -1.03
CHD7-208ENST00000528280 ICAM5Q9UMF0 924 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 PROCRQ9UNN8 238 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 SLC35A3Q9Y2D2 325 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 CARD8Q9Y2G2 431 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 MAP1AP78559 2803 aaPredicted RBP8.63□□□□□ -1.03
CHD7-208ENST00000528280 DOCK7Q96N67 2140 aa8.63□□□□□ -1.03
CHD7-208ENST00000528280 NUP214P35658 2090 aaPredicted RBP8.62□□□□□ -1.03
CHD7-208ENST00000528280 SH3D21A4FU49 640 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 CCDC154A6NI56 674 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 C17orf51A8MQB3 221 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 C16orf97H3BN30 126 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 SDHDO14521 159 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 SLC22A3O75751 556 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 TGDSO95455 350 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 KRT75O95678 551 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 PGRP06401 933 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 UBL4AP11441 157 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 PPP3CBP16298 524 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 PGCP20142 388 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 PSMA4P25789 261 aaKnown RBP8.62□□□□□ -1.03
CHD7-208ENST00000528280 DNAJA1P31689 397 aaKnown RBP8.62□□□□□ -1.03
CHD7-208ENST00000528280 CD79BP40259 229 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 KCNJ5P48544 419 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 KHKP50053 298 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 UFM1P61960 85 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 IRX1P78414 480 aaPredicted RBP8.62□□□□□ -1.03
CHD7-208ENST00000528280 HPCAP84074 193 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 ZNF117Q03924 483 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 GPR68Q15743 365 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 FAM174BQ3ZCQ3 159 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 SLC25A53Q5H9E4 307 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 SPANXN4Q5MJ08 99 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 SAXO2Q658L1 398 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 NXNQ6DKJ4 435 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 ZNF621Q6ZSS3 439 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 BEND4Q6ZU67 534 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 ZNF771Q7L3S4 317 aaPredicted RBP8.62□□□□□ -1.03
CHD7-208ENST00000528280 BTLAQ7Z6A9 289 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 GGNQ86UU5 652 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 SLC43A2Q8N370 569 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 ZNF614Q8N883 585 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 OR5D16Q8NGK9 328 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 OR6K3Q8NGY3 331 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 OR10D3Q8NH80 312 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 LINC01560Q8TB33 94 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 ST8SIA1Q92185 356 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 ZNF75CPQ92670 426 aaPredicted RBP8.62□□□□□ -1.03
CHD7-208ENST00000528280 CPNE4Q96A23 557 aaPredicted RBP8.62□□□□□ -1.03
CHD7-208ENST00000528280 ROPN1LQ96C74 230 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 OTUB1Q96FW1 271 aaPredicted RBP8.62□□□□□ -1.03
CHD7-208ENST00000528280 KLHL15Q96M94 604 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 USB1Q9BQ65 265 aaKnown RBP8.62□□□□□ -1.03
CHD7-208ENST00000528280 SLC35A5Q9BS91 424 aa8.62□□□□□ -1.03
CHD7-208ENST00000528280 HDHD5Q9BXW7 423 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms