RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 ETV2O00321 342 aaPredicted RBP29.67■■■□□ 2.34
SSSCA1-205ENST00000527920 ZNF264O43296 627 aa29.67■■■□□ 2.34
SSSCA1-205ENST00000527920 KIAA0513O60268 411 aa29.67■■■□□ 2.34
SSSCA1-205ENST00000527920 FCMRO60667 390 aa29.67■■■□□ 2.34
SSSCA1-205ENST00000527920 OR12D1P0DN82 309 aa29.67■■■□□ 2.34
SSSCA1-205ENST00000527920 EPXP11678 715 aa29.67■■■□□ 2.34
SSSCA1-205ENST00000527920 CHI3L1P36222 383 aaPredicted RBP29.67■■■□□ 2.34
SSSCA1-205ENST00000527920 EIF1AXP47813 144 aaKnown RBP29.67■■■□□ 2.34
SSSCA1-205ENST00000527920 FOXF1Q12946 379 aa29.67■■■□□ 2.34
SSSCA1-205ENST00000527920 SLC9B1Q4ZJI4 515 aa29.67■■■□□ 2.34
SSSCA1-205ENST00000527920 NXNQ6DKJ4 435 aa29.67■■■□□ 2.34
SSSCA1-205ENST00000527920 CNEP1R1Q8N9A8 125 aa29.67■■■□□ 2.34
SSSCA1-205ENST00000527920 OR5W2Q8NH69 310 aa29.67■■■□□ 2.34
SSSCA1-205ENST00000527920 OR2V1Q8NHB1 315 aa29.67■■■□□ 2.34
SSSCA1-205ENST00000527920 GPR119Q8TDV5 335 aa29.67■■■□□ 2.34
SSSCA1-205ENST00000527920 XAGE5Q8WWM1 108 aa29.67■■■□□ 2.34
SSSCA1-205ENST00000527920 PANX1Q96RD7 426 aa29.67■■■□□ 2.34
SSSCA1-205ENST00000527920 SAP130Q9H0E3 1048 aa29.67■■■□□ 2.34
SSSCA1-205ENST00000527920 SDR39U1Q9NRG7 319 aaPredicted RBP29.67■■■□□ 2.34
SSSCA1-205ENST00000527920 KCNE5Q9UJ90 142 aa29.67■■■□□ 2.34
SSSCA1-205ENST00000527920 CCDC154A6NI56 674 aa29.66■■■□□ 2.34
SSSCA1-205ENST00000527920 A6NNC1 897 aa29.66■■■□□ 2.34
SSSCA1-205ENST00000527920 DNAJA2O60884 412 aa29.66■■■□□ 2.34
SSSCA1-205ENST00000527920 NUDT14O95848 222 aa29.66■■■□□ 2.34
SSSCA1-205ENST00000527920 IL6P05231 212 aa29.66■■■□□ 2.34
SSSCA1-205ENST00000527920 GPR68Q15743 365 aa29.66■■■□□ 2.34
SSSCA1-205ENST00000527920 PDSS1Q5T2R2 415 aa29.66■■■□□ 2.34
SSSCA1-205ENST00000527920 TNFAIP8L2Q6P589 184 aaPredicted RBP29.66■■■□□ 2.34
SSSCA1-205ENST00000527920 MRGPRX4Q96LA9 322 aa29.66■■■□□ 2.34
SSSCA1-205ENST00000527920 RASSF1Q9NS23 344 aa29.66■■■□□ 2.34
SSSCA1-205ENST00000527920 ZIM2Q9NZV7 527 aa29.66■■■□□ 2.34
SSSCA1-205ENST00000527920 MKLN1Q9UL63 735 aa29.66■■■□□ 2.34
SSSCA1-205ENST00000527920 MCTS1Q9ULC4 181 aaKnown RBP29.66■■■□□ 2.34
SSSCA1-205ENST00000527920 SLC22A3O75751 556 aa29.65■■■□□ 2.34
SSSCA1-205ENST00000527920 UGT2B17O75795 530 aa29.65■■■□□ 2.34
SSSCA1-205ENST00000527920 AQP8O94778 261 aa29.65■■■□□ 2.34
SSSCA1-205ENST00000527920 NTN1O95631 604 aa29.65■■■□□ 2.34
SSSCA1-205ENST00000527920 CD8BP10966 210 aa29.65■■■□□ 2.34
SSSCA1-205ENST00000527920 SLC25A53Q5H9E4 307 aa29.65■■■□□ 2.34
SSSCA1-205ENST00000527920 VWA1Q6PCB0 445 aa29.65■■■□□ 2.34
SSSCA1-205ENST00000527920 KLHL15Q96M94 604 aa29.65■■■□□ 2.34
SSSCA1-205ENST00000527920 DACH2Q96NX9 599 aa29.65■■■□□ 2.34
SSSCA1-205ENST00000527920 LAT2Q9GZY6 243 aa29.65■■■□□ 2.34
SSSCA1-205ENST00000527920 DNAJB12Q9NXW2 375 aaKnown RBP29.65■■■□□ 2.34
SSSCA1-205ENST00000527920 WDR45Q9Y484 360 aa29.65■■■□□ 2.34
SSSCA1-205ENST00000527920 A0A0J9YW62 118 aa29.64■■■□□ 2.34
SSSCA1-205ENST00000527920 C9JVG2 144 aa29.64■■■□□ 2.34
SSSCA1-205ENST00000527920 PRKCAP17252 672 aa29.64■■■□□ 2.34
SSSCA1-205ENST00000527920 MAGEA8P43361 318 aa29.64■■■□□ 2.34
SSSCA1-205ENST00000527920 ANXA11P50995 505 aaKnown RBP29.64■■■□□ 2.34
SSSCA1-205ENST00000527920 FUT5Q11128 374 aa29.64■■■□□ 2.34
SSSCA1-205ENST00000527920 SKP2Q13309 424 aa29.64■■■□□ 2.34
SSSCA1-205ENST00000527920 FAM214BQ7L5A3 538 aa29.64■■■□□ 2.34
SSSCA1-205ENST00000527920 BTLAQ7Z6A9 289 aa29.64■■■□□ 2.34
SSSCA1-205ENST00000527920 LILRA2Q8N149 483 aa29.64■■■□□ 2.34
SSSCA1-205ENST00000527920 RAB8BQ92930 207 aa29.64■■■□□ 2.34
SSSCA1-205ENST00000527920 ROPN1LQ96C74 230 aa29.64■■■□□ 2.34
SSSCA1-205ENST00000527920 GJE1A6NN92 205 aa29.63■■■□□ 2.33
SSSCA1-205ENST00000527920 CGAP01215 116 aa29.63■■■□□ 2.33
SSSCA1-205ENST00000527920 RNF144AP50876 292 aaPredicted RBP29.63■■■□□ 2.33
SSSCA1-205ENST00000527920 CASP9P55211 416 aa29.63■■■□□ 2.33
SSSCA1-205ENST00000527920 CBFBQ13951 182 aa29.63■■■□□ 2.33
SSSCA1-205ENST00000527920 NDUFAF6Q330K2 333 aa29.63■■■□□ 2.33
SSSCA1-205ENST00000527920 TYW3Q6IPR3 259 aaKnown RBP29.63■■■□□ 2.33
SSSCA1-205ENST00000527920 MSANTD1Q6ZTZ1 278 aa29.63■■■□□ 2.33
SSSCA1-205ENST00000527920 EIF3MQ7L2H7 374 aaKnown RBP29.63■■■□□ 2.33
SSSCA1-205ENST00000527920 FBXO27Q8NI29 283 aa29.63■■■□□ 2.33
SSSCA1-205ENST00000527920 GMPPAQ96IJ6 420 aaPredicted RBP29.63■■■□□ 2.33
SSSCA1-205ENST00000527920 OR52B2Q96RD2 323 aa29.63■■■□□ 2.33
SSSCA1-205ENST00000527920 INPP5KQ9BT40 448 aa29.63■■■□□ 2.33
SSSCA1-205ENST00000527920 PRRG4Q9BZD6 226 aa29.63■■■□□ 2.33
SSSCA1-205ENST00000527920 CLEC4MQ9H2X3 399 aaPredicted RBP29.63■■■□□ 2.33
SSSCA1-205ENST00000527920 TMEM185BQ9H7F4 350 aa29.63■■■□□ 2.33
SSSCA1-205ENST00000527920 GLRX2Q9NS18 164 aa29.63■■■□□ 2.33
SSSCA1-205ENST00000527920 LIPT1Q9Y234 373 aa29.63■■■□□ 2.33
SSSCA1-205ENST00000527920 USH1CQ9Y6N9 552 aa29.63■■■□□ 2.33
SSSCA1-205ENST00000527920 HMGN4O00479 90 aa29.62■■■□□ 2.33
SSSCA1-205ENST00000527920 TNFSF11O14788 317 aa29.62■■■□□ 2.33
SSSCA1-205ENST00000527920 UBDO15205 165 aa29.62■■■□□ 2.33
SSSCA1-205ENST00000527920 CXCL13O43927 109 aa29.62■■■□□ 2.33
SSSCA1-205ENST00000527920 SMNDC1O75940 238 aaKnown RBP eCLIP29.62■■■□□ 2.33
SSSCA1-205ENST00000527920 TGDSO95455 350 aa29.62■■■□□ 2.33
SSSCA1-205ENST00000527920 SYNGR4O95473 234 aa29.62■■■□□ 2.33
SSSCA1-205ENST00000527920 SLC6A8P48029 635 aa29.62■■■□□ 2.33
SSSCA1-205ENST00000527920 TOMM34Q15785 309 aaPredicted RBP29.62■■■□□ 2.33
SSSCA1-205ENST00000527920 TTMPQ5BVD1 217 aa29.62■■■□□ 2.33
SSSCA1-205ENST00000527920 HBMQ6B0K9 141 aa29.62■■■□□ 2.33
SSSCA1-205ENST00000527920 FRRS1Q6ZNA5 592 aa29.62■■■□□ 2.33
SSSCA1-205ENST00000527920 RNF130Q86XS8 419 aa29.62■■■□□ 2.33
SSSCA1-205ENST00000527920 ZNF619Q8N2I2 560 aa29.62■■■□□ 2.33
SSSCA1-205ENST00000527920 TMCO5AQ8N6Q1 288 aa29.62■■■□□ 2.33
SSSCA1-205ENST00000527920 FAM71CQ8NEG0 241 aa29.62■■■□□ 2.33
SSSCA1-205ENST00000527920 GPATCH1Q9BRR8 931 aaKnown RBP29.62■■■□□ 2.33
SSSCA1-205ENST00000527920 POLDIP3Q9BY77 421 aaKnown RBP29.62■■■□□ 2.33
SSSCA1-205ENST00000527920 VIPAS39Q9H9C1 493 aa29.62■■■□□ 2.33
SSSCA1-205ENST00000527920 SLC35A3Q9Y2D2 325 aa29.62■■■□□ 2.33
SSSCA1-205ENST00000527920 CENPVL1A0A0U1RR11 272 aa29.61■■■□□ 2.33
SSSCA1-205ENST00000527920 CSTAP01040 98 aa29.61■■■□□ 2.33
SSSCA1-205ENST00000527920 IL11P20809 199 aa29.61■■■□□ 2.33
SSSCA1-205ENST00000527920 CDKN2CP42773 168 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms