RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 MTERF4Q7Z6M4 381 aaKnown RBP16.08■□□□□ 0.16
CLK4-211ENST00000522556 GPR119Q8TDV5 335 aa16.08■□□□□ 0.16
CLK4-211ENST00000522556 PINK1Q9BXM7 581 aa16.08■□□□□ 0.16
CLK4-211ENST00000522556 TRIM8Q9BZR9 551 aa16.08■□□□□ 0.16
CLK4-211ENST00000522556 IKZF5Q9H5V7 419 aa16.08■□□□□ 0.16
CLK4-211ENST00000522556 RMND5AQ9H871 391 aa16.08■□□□□ 0.16
CLK4-211ENST00000522556 CALHM2Q9HA72 323 aa16.08■□□□□ 0.16
CLK4-211ENST00000522556 ZNF264O43296 627 aa16.07■□□□□ 0.16
CLK4-211ENST00000522556 SOX30O94993 753 aa16.07■□□□□ 0.16
CLK4-211ENST00000522556 ZNF17P17021 662 aa16.07■□□□□ 0.16
CLK4-211ENST00000522556 IGFBP2P18065 325 aa16.07■□□□□ 0.16
CLK4-211ENST00000522556 PGM1P36871 562 aa16.07■□□□□ 0.16
CLK4-211ENST00000522556 CRATP43155 626 aa16.07■□□□□ 0.16
CLK4-211ENST00000522556 DLX5P56178 289 aa16.07■□□□□ 0.16
CLK4-211ENST00000522556 BCL2A1Q16548 175 aa16.07■□□□□ 0.16
CLK4-211ENST00000522556 GLYR1Q49A26 553 aaPredicted RBP16.07■□□□□ 0.16
CLK4-211ENST00000522556 GRAMD2AQ8IUY3 354 aa16.07■□□□□ 0.16
CLK4-211ENST00000522556 FAM71CQ8NEG0 241 aa16.07■□□□□ 0.16
CLK4-211ENST00000522556 FBXO27Q8NI29 283 aa16.07■□□□□ 0.16
CLK4-211ENST00000522556 STON2Q8WXE9 905 aa16.07■□□□□ 0.16
CLK4-211ENST00000522556 INTS12Q96CB8 462 aaKnown RBP16.07■□□□□ 0.16
CLK4-211ENST00000522556 DTNBP1Q96EV8 351 aa16.07■□□□□ 0.16
CLK4-211ENST00000522556 ADGRG7Q96K78 797 aa16.07■□□□□ 0.16
CLK4-211ENST00000522556 TRNT1Q96Q11 434 aaKnown RBP16.07■□□□□ 0.16
CLK4-211ENST00000522556 THUMPD3Q9BV44 507 aaKnown RBP16.07■□□□□ 0.16
CLK4-211ENST00000522556 CHST11Q9NPF2 352 aa16.07■□□□□ 0.16
CLK4-211ENST00000522556 KCNJ16Q9NPI9 418 aa16.07■□□□□ 0.16
CLK4-211ENST00000522556 VAPAQ9P0L0 249 aa16.07■□□□□ 0.16
CLK4-211ENST00000522556 A0A087WZY1 265 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 A0A096LPI6 279 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 TRBV5-3A0A0A0MS03 114 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 A0A0J9YW62 118 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 C7orf72A4D263 438 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 HSPB2A8KAH6 182 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 H3BNH8 94 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 EIF1AYO14602 144 aaKnown RBP16.06■□□□□ 0.16
CLK4-211ENST00000522556 HNRNPRO43390 633 aaKnown RBP16.06■□□□□ 0.16
CLK4-211ENST00000522556 NTN1O95631 604 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 KRT75O95678 551 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 AGR2O95994 175 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 CSTAP01040 98 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 IL2RAP01589 272 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 BCHEP06276 602 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 PRKCAP17252 672 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 RPS4Y1P22090 263 aaKnown RBP16.06■□□□□ 0.16
CLK4-211ENST00000522556 SLC6A8P48029 635 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 DSTNP60981 165 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 HPCAP84074 193 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 QPRTQ15274 297 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 HSPB2Q16082 182 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 LRIF1Q5T3J3 769 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 MEX3BQ6ZN04 569 aaKnown RBP16.06■□□□□ 0.16
CLK4-211ENST00000522556 RETREG3Q86VR2 466 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 ZNF295-AS1Q8N0V1 137 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 MEIOBQ8N635 442 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 FNDC9Q8TBE3 224 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 CNOT9Q92600 299 aaKnown RBP16.06■□□□□ 0.16
CLK4-211ENST00000522556 MAL2Q969L2 176 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 ZBTB8AQ96BR9 441 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 UCN2Q96RP3 112 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 ENKD1Q9H0I2 346 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 POLE3Q9NRF9 147 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 AP4B1Q9Y6B7 739 aa16.06■□□□□ 0.16
CLK4-211ENST00000522556 CLIC1O00299 241 aa16.05■□□□□ 0.16
CLK4-211ENST00000522556 AP3D1O14617 1153 aa16.05■□□□□ 0.16
CLK4-211ENST00000522556 TNFSF11O14788 317 aa16.05■□□□□ 0.16
CLK4-211ENST00000522556 AQP8O94778 261 aa16.05■□□□□ 0.16
CLK4-211ENST00000522556 TMIGD3P0DMS9 266 aaPredicted RBP16.05■□□□□ 0.16
CLK4-211ENST00000522556 NR2F1P10589 423 aa16.05■□□□□ 0.16
CLK4-211ENST00000522556 COX6B1P14854 86 aa16.05■□□□□ 0.16
CLK4-211ENST00000522556 SFTPDP35247 375 aa16.05■□□□□ 0.16
CLK4-211ENST00000522556 SUMO3P55854 103 aaPredicted RBP16.05■□□□□ 0.16
CLK4-211ENST00000522556 PON3Q15166 354 aa16.05■□□□□ 0.16
CLK4-211ENST00000522556 HSP90B2PQ58FF3 399 aa16.05■□□□□ 0.16
CLK4-211ENST00000522556 AP1ARQ63HQ0 302 aa16.05■□□□□ 0.16
CLK4-211ENST00000522556 LRRC74BQ6ZQY2 392 aa16.05■□□□□ 0.16
CLK4-211ENST00000522556 METTL25Q8N6Q8 603 aa16.05■□□□□ 0.16
CLK4-211ENST00000522556 OR5W2Q8NH69 310 aa16.05■□□□□ 0.16
CLK4-211ENST00000522556 SLC38A5Q8WUX1 472 aa16.05■□□□□ 0.16
CLK4-211ENST00000522556 WNT2BQ93097 391 aa16.05■□□□□ 0.16
CLK4-211ENST00000522556 TREX2Q9BQ50 279 aaPredicted RBP16.05■□□□□ 0.16
CLK4-211ENST00000522556 RSPO3Q9BXY4 272 aaPredicted RBP16.05■□□□□ 0.16
CLK4-211ENST00000522556 LAT2Q9GZY6 243 aa16.05■□□□□ 0.16
CLK4-211ENST00000522556 MED4Q9NPJ6 270 aa16.05■□□□□ 0.16
CLK4-211ENST00000522556 DSPPQ9NZW4 1301 aa16.04■□□□□ 0.16
CLK4-211ENST00000522556 AGAP5A6NIR3 686 aa16.04■□□□□ 0.16
CLK4-211ENST00000522556 SLC22A20A6NK97 555 aa16.04■□□□□ 0.16
CLK4-211ENST00000522556 FAM47E-STBD1D6RA91 191 aa16.04■□□□□ 0.16
CLK4-211ENST00000522556 EIF4E2O60573 245 aaKnown RBP16.04■□□□□ 0.16
CLK4-211ENST00000522556 DNAJA2O60884 412 aa16.04■□□□□ 0.16
CLK4-211ENST00000522556 GUSBP08236 651 aa16.04■□□□□ 0.16
CLK4-211ENST00000522556 VIMP08670 466 aaKnown RBP16.04■□□□□ 0.16
CLK4-211ENST00000522556 TFPTP0C1Z6 253 aa16.04■□□□□ 0.16
CLK4-211ENST00000522556 CTSSP25774 331 aa16.04■□□□□ 0.16
CLK4-211ENST00000522556 RYKP34925 604 aa16.04■□□□□ 0.16
CLK4-211ENST00000522556 EIF1AXP47813 144 aaKnown RBP16.04■□□□□ 0.16
CLK4-211ENST00000522556 RGNQ15493 299 aa16.04■□□□□ 0.16
CLK4-211ENST00000522556 SLC25A35Q3KQZ1 300 aa16.04■□□□□ 0.16
CLK4-211ENST00000522556 VWA1Q6PCB0 445 aa16.04■□□□□ 0.16
CLK4-211ENST00000522556 DLEU7Q6UYE1 221 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms