RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ZNF500O60304 480 aaPredicted RBP18.52■□□□□ 0.56
SDCBP-209ENST00000522243 SS18L1O75177 396 aaPredicted RBP18.52■□□□□ 0.56
SDCBP-209ENST00000522243 CPSF4O95639 269 aaKnown RBP18.52■□□□□ 0.56
SDCBP-209ENST00000522243 CD53P19397 219 aa18.52■□□□□ 0.56
SDCBP-209ENST00000522243 ADAM8P78325 824 aa18.52■□□□□ 0.56
SDCBP-209ENST00000522243 GPR68Q15743 365 aa18.52■□□□□ 0.56
SDCBP-209ENST00000522243 SMU1Q2TAY7 513 aa18.52■□□□□ 0.56
SDCBP-209ENST00000522243 PDSS1Q5T2R2 415 aa18.52■□□□□ 0.56
SDCBP-209ENST00000522243 BHLHB9Q6PI77 547 aa18.52■□□□□ 0.56
SDCBP-209ENST00000522243 ANKRD46Q86W74 232 aa18.52■□□□□ 0.56
SDCBP-209ENST00000522243 TMCO5AQ8N6Q1 288 aa18.52■□□□□ 0.56
SDCBP-209ENST00000522243 OR4A15Q8NGL6 344 aa18.52■□□□□ 0.56
SDCBP-209ENST00000522243 OR6K3Q8NGY3 331 aa18.52■□□□□ 0.56
SDCBP-209ENST00000522243 ZNF524Q96C55 264 aa18.52■□□□□ 0.56
SDCBP-209ENST00000522243 ARSGQ96EG1 525 aa18.52■□□□□ 0.56
SDCBP-209ENST00000522243 PAIP2Q9BPZ3 127 aaKnown RBP18.52■□□□□ 0.56
SDCBP-209ENST00000522243 NUF2Q9BZD4 464 aa18.52■□□□□ 0.56
SDCBP-209ENST00000522243 PLSCR4Q9NRQ2 329 aa18.52■□□□□ 0.56
SDCBP-209ENST00000522243 PNPOQ9NVS9 261 aa18.52■□□□□ 0.56
SDCBP-209ENST00000522243 RAB21Q9UL25 225 aa18.52■□□□□ 0.56
SDCBP-209ENST00000522243 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.52■□□□□ 0.56
SDCBP-209ENST00000522243 DTNAQ9Y4J8 743 aa18.52■□□□□ 0.56
SDCBP-209ENST00000522243 HRNRQ86YZ3 2850 aaPredicted RBP18.52■□□□□ 0.56
SDCBP-209ENST00000522243 ZNF195O14628 629 aa18.51■□□□□ 0.55
SDCBP-209ENST00000522243 SOX30O94993 753 aa18.51■□□□□ 0.55
SDCBP-209ENST00000522243 CRYGSP22914 178 aa18.51■□□□□ 0.55
SDCBP-209ENST00000522243 EIF1P41567 113 aaKnown RBP18.51■□□□□ 0.55
SDCBP-209ENST00000522243 CCR4P51679 360 aa18.51■□□□□ 0.55
SDCBP-209ENST00000522243 CARD18P57730 90 aa18.51■□□□□ 0.55
SDCBP-209ENST00000522243 PHC1P78364 1004 aa18.51■□□□□ 0.55
SDCBP-209ENST00000522243 STX3Q13277 289 aa18.51■□□□□ 0.55
SDCBP-209ENST00000522243 TNFAIP8L3Q5GJ75 292 aa18.51■□□□□ 0.55
SDCBP-209ENST00000522243 PDZK1Q5T2W1 519 aa18.51■□□□□ 0.55
SDCBP-209ENST00000522243 ANKRD42Q8N9B4 389 aa18.51■□□□□ 0.55
SDCBP-209ENST00000522243 GPR119Q8TDV5 335 aa18.51■□□□□ 0.55
SDCBP-209ENST00000522243 SRXN1Q9BYN0 137 aa18.51■□□□□ 0.55
SDCBP-209ENST00000522243 C12orf49Q9H741 205 aa18.51■□□□□ 0.55
SDCBP-209ENST00000522243 PCDHGB4Q9UN71 923 aa18.51■□□□□ 0.55
SDCBP-209ENST00000522243 RNASET2O00584 256 aaKnown RBP18.5■□□□□ 0.55
SDCBP-209ENST00000522243 CYP7B1O75881 506 aa18.5■□□□□ 0.55
SDCBP-209ENST00000522243 SUMO3P55854 103 aaPredicted RBP18.5■□□□□ 0.55
SDCBP-209ENST00000522243 TMEM176BQ3YBM2 270 aaPredicted RBP18.5■□□□□ 0.55
SDCBP-209ENST00000522243 OR8J2Q8NGG1 315 aa18.5■□□□□ 0.55
SDCBP-209ENST00000522243 HS3ST6Q96QI5 342 aa18.5■□□□□ 0.55
SDCBP-209ENST00000522243 OR51I1Q9H343 314 aa18.5■□□□□ 0.55
SDCBP-209ENST00000522243 KCNE5Q9UJ90 142 aa18.5■□□□□ 0.55
SDCBP-209ENST00000522243 MKLN1Q9UL63 735 aa18.5■□□□□ 0.55
SDCBP-209ENST00000522243 GPC6Q9Y625 555 aaPredicted RBP18.5■□□□□ 0.55
SDCBP-209ENST00000522243 HEATR5AQ86XA9 2040 aa18.5■□□□□ 0.55
SDCBP-209ENST00000522243 CENPVL1A0A0U1RR11 272 aa18.49■□□□□ 0.55
SDCBP-209ENST00000522243 DUXAA6NLW8 204 aa18.49■□□□□ 0.55
SDCBP-209ENST00000522243 ZNF264O43296 627 aa18.49■□□□□ 0.55
SDCBP-209ENST00000522243 FCMRO60667 390 aa18.49■□□□□ 0.55
SDCBP-209ENST00000522243 SCN2BO60939 215 aa18.49■□□□□ 0.55
SDCBP-209ENST00000522243 TUBBP07437 444 aa18.49■□□□□ 0.55
SDCBP-209ENST00000522243 OR12D1P0DN82 309 aa18.49■□□□□ 0.55
SDCBP-209ENST00000522243 UBL4AP11441 157 aa18.49■□□□□ 0.55
SDCBP-209ENST00000522243 PRKCAP17252 672 aa18.49■□□□□ 0.55
SDCBP-209ENST00000522243 LBPP18428 481 aa18.49■□□□□ 0.55
SDCBP-209ENST00000522243 ELK4P28324 431 aa18.49■□□□□ 0.55
SDCBP-209ENST00000522243 ADH6P28332 368 aa18.49■□□□□ 0.55
SDCBP-209ENST00000522243 NME5P56597 212 aa18.49■□□□□ 0.55
SDCBP-209ENST00000522243 BST1Q10588 318 aa18.49■□□□□ 0.55
SDCBP-209ENST00000522243 ZNF239Q16600 458 aaKnown RBP18.49■□□□□ 0.55
SDCBP-209ENST00000522243 WFDC11Q8NEX6 87 aa18.49■□□□□ 0.55
SDCBP-209ENST00000522243 OR5W2Q8NH69 310 aa18.49■□□□□ 0.55
SDCBP-209ENST00000522243 ABHD3Q8WU67 409 aa18.49■□□□□ 0.55
SDCBP-209ENST00000522243 UBTD1Q9HAC8 227 aa18.49■□□□□ 0.55
SDCBP-209ENST00000522243 GLRX2Q9NS18 164 aa18.49■□□□□ 0.55
SDCBP-209ENST00000522243 ACTL7BQ9Y614 415 aa18.49■□□□□ 0.55
SDCBP-209ENST00000522243 SERINC4A6NH21 518 aa18.48■□□□□ 0.55
SDCBP-209ENST00000522243 ANKRD28O15084 1053 aa18.48■□□□□ 0.55
SDCBP-209ENST00000522243 AGTR1P30556 359 aa18.48■□□□□ 0.55
SDCBP-209ENST00000522243 QPRTQ15274 297 aa18.48■□□□□ 0.55
SDCBP-209ENST00000522243 ARHGAP11BQ3KRB8 267 aa18.48■□□□□ 0.55
SDCBP-209ENST00000522243 SPANXN4Q5MJ08 99 aa18.48■□□□□ 0.55
SDCBP-209ENST00000522243 GTF2IRD2BQ6EKJ0 949 aa18.48■□□□□ 0.55
SDCBP-209ENST00000522243 TNFAIP8L2Q6P589 184 aaPredicted RBP18.48■□□□□ 0.55
SDCBP-209ENST00000522243 C16orf62Q7Z3J2 963 aa18.48■□□□□ 0.55
SDCBP-209ENST00000522243 GTF2IRD2Q86UP8 949 aa18.48■□□□□ 0.55
SDCBP-209ENST00000522243 XAGE5Q8WWM1 108 aa18.48■□□□□ 0.55
SDCBP-209ENST00000522243 RAB8BQ92930 207 aa18.48■□□□□ 0.55
SDCBP-209ENST00000522243 REXO5Q96IC2 774 aaKnown RBP18.48■□□□□ 0.55
SDCBP-209ENST00000522243 COQ10BQ9H8M1 238 aa18.48■□□□□ 0.55
SDCBP-209ENST00000522243 HAO1Q9UJM8 370 aa18.48■□□□□ 0.55
SDCBP-209ENST00000522243 PRSS51A0A1B0GVH4 220 aa18.47■□□□□ 0.55
SDCBP-209ENST00000522243 A0A1W2PNR3 127 aa18.47■□□□□ 0.55
SDCBP-209ENST00000522243 ESPNB1AK53 854 aa18.47■□□□□ 0.55
SDCBP-209ENST00000522243 EIF4E2O60573 245 aaKnown RBP18.47■□□□□ 0.55
SDCBP-209ENST00000522243 STX11O75558 287 aa18.47■□□□□ 0.55
SDCBP-209ENST00000522243 UGT2B17O75795 530 aa18.47■□□□□ 0.55
SDCBP-209ENST00000522243 SNUPNO95149 360 aaKnown RBP18.47■□□□□ 0.55
SDCBP-209ENST00000522243 NTN1O95631 604 aa18.47■□□□□ 0.55
SDCBP-209ENST00000522243 AK1P00568 194 aa18.47■□□□□ 0.55
SDCBP-209ENST00000522243 THBDP07204 575 aa18.47■□□□□ 0.55
SDCBP-209ENST00000522243 UQCRC2P22695 453 aa18.47■□□□□ 0.55
SDCBP-209ENST00000522243 CBFBQ13951 182 aa18.47■□□□□ 0.55
SDCBP-209ENST00000522243 ZNF141Q15928 474 aa18.47■□□□□ 0.55
SDCBP-209ENST00000522243 ANXA8L1Q5VT79 327 aa18.47■□□□□ 0.55
SDCBP-209ENST00000522243 HHATQ5VTY9 493 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms