RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 URB1O60287 2271 aaKnown RBP11.94□□□□□ -0.5
CPNE3-205ENST00000522240 CELSR3Q9NYQ7 3312 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 IGLV3-32A0A0A0MS00 114 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 ANKRD33BA6NCL7 494 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 GTPBP1O00178 669 aaKnown RBP11.94□□□□□ -0.5
CPNE3-205ENST00000522240 GNGT2O14610 69 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 SCO2O43819 266 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 SEMA7AO75326 666 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 DIRAS1O95057 198 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 UBTFL6P0CB48 400 aaPredicted RBP11.94□□□□□ -0.5
CPNE3-205ENST00000522240 THRBP10828 461 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 UQCRBP14927 111 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 FPR1P21462 350 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 RRM2P31350 389 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 EIF2S3P41091 472 aaKnown RBP11.94□□□□□ -0.5
CPNE3-205ENST00000522240 PTGDSP41222 190 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 ACAA2P42765 397 aaKnown RBP11.94□□□□□ -0.5
CPNE3-205ENST00000522240 GAS1P54826 345 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 SUMO3P55854 103 aaPredicted RBP11.94□□□□□ -0.5
CPNE3-205ENST00000522240 SPIBQ01892 262 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 ZNF117Q03924 483 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 EPS8Q12929 822 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 SLC30A6Q6NXT4 461 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 ZNF613Q6PF04 617 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 IL20RBQ6UXL0 311 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 PLEKHM3Q6ZWE6 761 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 MARCH3Q86UD3 253 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 SPACA3Q8IXA5 215 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 CYP4Z2PQ8N1L4 340 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 GATSQ8NAP1 163 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 PIK3C3Q8NEB9 887 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 OR5M3Q8NGP4 307 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 OR5K1Q8NHB7 308 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 NTNG2Q96CW9 530 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 NRBF2Q96F24 287 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 MCHR1Q99705 422 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 C9orf16Q9BUW7 83 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 TRIM2Q9C040 744 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 RNF32Q9H0A6 362 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 VCX3BQ9H321 246 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 ANKRD19PQ9H560 264 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 NTN4Q9HB63 628 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 CPNE5Q9HCH3 593 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 C8orf4Q9NR00 106 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 SDHAF3Q9NRP4 125 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 VNN3Q9NY84 501 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 KLRF1Q9NZS2 232 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 CNIH4Q9P003 139 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 CNOT11Q9UKZ1 510 aaKnown RBP11.94□□□□□ -0.5
CPNE3-205ENST00000522240 WIF1Q9Y5W5 379 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 LYVE1Q9Y5Y7 322 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 DOCK10Q96BY6 2186 aa11.94□□□□□ -0.5
CPNE3-205ENST00000522240 A0A1W2PRQ8 180 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 J3KTA2 159 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 FFAR1O14842 300 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 RRP8O43159 456 aaKnown RBP11.93□□□□□ -0.5
CPNE3-205ENST00000522240 TPST2O60704 377 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 E2F6O75461 281 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 CEACAM4O75871 244 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 H1F0P07305 194 aaKnown RBP11.93□□□□□ -0.5
CPNE3-205ENST00000522240 GKN3PP0CG01 181 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 PRG2P13727 222 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 HTR2AP28223 471 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 PEX2P28328 305 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 MSX1P28360 303 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 DNAJA1P31689 397 aaKnown RBP11.93□□□□□ -0.5
CPNE3-205ENST00000522240 CASP3P42574 277 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 LIMS1P48059 325 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 CYB561P49447 251 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 RNF144AP50876 292 aaPredicted RBP11.93□□□□□ -0.5
CPNE3-205ENST00000522240 P2RX1P51575 399 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 HMGA2P52926 109 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 TAS2R41P59536 307 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 C17orf67Q0P5P2 114 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 ST3GAL3Q11203 375 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 MFAP5Q13361 173 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 DGCR6Q14129 220 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 COLEC12Q5KU26 742 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 ENTPD8Q5MY95 495 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 AGAP7PQ5VUJ5 663 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 BROXQ5VW32 411 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 SHQ1Q6PI26 577 aaKnown RBP11.93□□□□□ -0.5
CPNE3-205ENST00000522240 ISLR2Q6UXK2 745 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 HIPK1Q86Z02 1210 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 EPHX4Q8IUS5 362 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 TMCO5AQ8N6Q1 288 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 LSMEM1Q8N8F7 131 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 ICA1LQ8NDH6 482 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 SDCCAG3Q96C92 435 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 ARSGQ96EG1 525 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 FRMD6Q96NE9 622 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 AGAP4Q96P64 663 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 ANGPTL4Q9BY76 406 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 RTN4RQ9BZR6 473 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 SEMA6AQ9H2E6 1030 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 GPR83Q9NYM4 423 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 OAZ3Q9UMX2 235 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 CARD8Q9Y2G2 431 aa11.93□□□□□ -0.5
CPNE3-205ENST00000522240 SAMHD1Q9Y3Z3 626 aaKnown RBP11.93□□□□□ -0.5
CPNE3-205ENST00000522240 TESMINQ9Y4I5 508 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms