RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 OR5D13Q8NGL4 314 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 OR1F12Q8NHA8 337 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 CNIH3Q8TBE1 160 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 RBM4BQ9BQ04 359 aaKnown RBP2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 ZNF670Q9BS34 389 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 TMEM43Q9BTV4 400 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 GSDMCQ9BYG8 508 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 OPN3Q9H1Y3 402 aaPredicted RBP2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 FN3KRPQ9HA64 309 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 ELL3Q9HB65 397 aaPredicted RBP2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 POLD4Q9HCU8 107 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 UFSP2Q9NUQ7 469 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 HYPKQ9NX55 129 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 ELOVL2Q9NXB9 296 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 DHRS4-AS1Q9P1J3 65 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 ANGPTL2Q9UKU9 493 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 CLEC4AQ9UMR7 237 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 SCML2Q9UQR0 700 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 WDR45Q9Y484 360 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 IKBKGQ9Y6K9 419 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 MYO5BQ9ULV0 1848 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 CLTCL1P53675 1640 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 ABCA6Q8N139 1617 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 MROH1Q8NDA8 1641 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 ZFYVE16Q7Z3T8 1539 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 USP6P35125 1406 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 KIAA1107Q9UPP5 1409 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 KIF16BQ96L93 1317 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 QRICH2Q9H0J4 1663 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 CCDC141Q6ZP82 1450 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 NSD2O96028 1365 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 ARHGEF28Q8N1W1 1705 aaKnown RBP2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 PP2D1A8MPX8 630 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 NPIPA7E9PJI5 369 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 E9PQ18 207 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 FOXE1O00358 373 aaPredicted RBP2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 LINC01565O15544 149 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 ZNF264O43296 627 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 PRKAB2O43741 272 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 FCMRO60667 390 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 TSC22D2O75157 780 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 ZNF253O75346 499 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 TRIM3O75382 744 aaPredicted RBP2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 ANP32DO95626 131 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 NPIPA8P0DM63 369 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 SDC1P18827 310 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 MT3P25713 68 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 HPCAL1P37235 193 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 CAPGP40121 348 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 RND3P61587 244 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 NTHL1P78549 312 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 OC90Q02509 493 aaPredicted RBP2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 ST3GAL3Q11203 375 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 RAB40BQ12829 278 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 MXD4Q14582 209 aaPredicted RBP2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 ABRAXAS2Q15018 415 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 PDK3Q15120 406 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 KRTAP27-1Q3LI81 207 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 SFT2D3Q587I9 215 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 C10orf120Q5SQS8 335 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 SLX4IPQ5VYV7 408 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 TPGS2Q68CL5 300 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 ACSM5Q6NUN0 579 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 PAQR6Q6TCH4 344 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 SLC47A2Q86VL8 602 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 C9orf40Q8IXQ3 194 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 C15orf54Q8N8G6 183 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 BEST4Q8NFU0 473 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 OR5L2Q8NGL0 311 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 OR13C2Q8NGS9 318 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 RFESDQ8TAC1 157 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 ZNF671Q8TAW3 534 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 TRMT10AQ8TBZ6 339 aaKnown RBP2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 CTNNBL1Q8WYA6 563 aaPredicted RBP2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 C7orf34Q96L11 122 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 C1orf147Q96MC9 270 aaPredicted RBP2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 IWS1Q96ST2 819 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 RIT2Q99578 217 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 ZBTB18Q99592 522 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 CCT7Q99832 543 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 ANP32EQ9BTT0 268 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 CAPS2Q9BXY5 557 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 TM9SF3Q9HD45 589 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 EXOSC3Q9NQT5 275 aaKnown RBP2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 B3GNT2Q9NY97 397 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 AIPL1Q9NZN9 384 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 ZNF581Q9P0T4 197 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 PCSK1NQ9UHG2 260 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 RIMS3Q9UJD0 308 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 NPIPA1Q9UND3 350 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 ERVW-1Q9UQF0 538 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 MEMO1Q9Y316 297 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 NAALAD2Q9Y3Q0 740 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 TRPM2O94759 1503 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 ARAP3Q8WWN8 1544 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 C9orf84Q5VXU9 1444 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 PPRC1Q5VV67 1664 aaKnown RBP2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 VWDEQ8N2E2 1590 aa2.66□□□□□ -1.98
HMGN1P28-201ENST00000521340 KIF20BQ96Q89 1820 aa2.65□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms