RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	OR2G6	Q5TZ20	316 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	LINC00114	Q6XXX2	140 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	LNX2	Q8N448	690 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	ZNF614	Q8N883	585 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	ZSCAN1	Q8NBB4	408 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	BBS1	Q8NFJ9	593 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	OR9Q1	Q8NGQ5	310 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	GRHL3	Q8TE85	626 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	ABTB1	Q969K4	478 aa	Predicted RBP	11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	PTCHD1	Q96NR3	888 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	JAM3	Q9BX67	310 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	ASPN	Q9BXN1	380 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	C6orf62	Q9GZU0	229 aa	Predicted RBP	11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	FN3K	Q9H479	309 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	SIAE	Q9HAT2	523 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	KLHL3	Q9UH77	587 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	CSNK1G3	Q9Y6M4	447 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	CEP192	Q8TEP8	1941 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	PCDH15	Q96QU1	1955 aa		11.42	□□□□□ -0.58
SPIDR-210	ENST00000519362	ZNF670-ZNF695	F2Z2N8	137 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362		J3QRE1	110 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362		K7ESF4	209 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	KPNA4	O00629	521 aa	Predicted RBP	11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	RCBTB2	O95199	551 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	OCM2	P0CE71	109 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	OCM	P0CE72	109 aa	Predicted RBP	11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	BMP7	P18075	431 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	SOX6	P35712	828 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	SLC1A3	P43003	542 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	AFF3	P51826	1226 aa	Known RBP	11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	PGD	P52209	483 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	HSD11B2	P80365	405 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	ATP1A4	Q13733	1029 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	THSD4	Q6ZMP0	1018 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	SHF	Q7M4L6	423 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	ZNF550	Q7Z398	422 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	BMP8A	Q7Z5Y6	402 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	SNX29P2	Q8IUI4	249 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	CPO	Q8IVL8	374 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	CMIP	Q8IY22	773 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	CDK20	Q8IZL9	346 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	SLC25A45	Q8N413	288 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	BCORP1	Q8N888	145 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	OR4F15	Q8NGB8	312 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	OR52L1	Q8NGH7	329 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	RNF217	Q8TC41	542 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	GATAD2B	Q8WXI9	593 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	ARHGAP9	Q9BRR9	750 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	DUSP15	Q9H1R2	295 aa	Predicted RBP	11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	TBC1D17	Q9HA65	648 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	CUTC	Q9NTM9	273 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	QPCTL	Q9NXS2	382 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	SEMA5B	Q9P283	1151 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	PRODH2	Q9UF12	536 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	SF3B6	Q9Y3B4	125 aa	Known RBP	11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	PEX16	Q9Y5Y5	336 aa		11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362	SPIN1	Q9Y657	262 aa	Predicted RBP	11.41	□□□□□ -0.58
SPIDR-210	ENST00000519362		A0A075B6Q4	140 aa		11.4	□□□□□ -0.58
SPIDR-210	ENST00000519362	SOCS6	O14544	535 aa		11.4	□□□□□ -0.58
SPIDR-210	ENST00000519362	BCAT2	O15382	392 aa	Predicted RBP	11.4	□□□□□ -0.58
SPIDR-210	ENST00000519362	OR2B3	O76000	313 aa		11.4	□□□□□ -0.58
SPIDR-210	ENST00000519362	IFNA16	P05015	189 aa		11.4	□□□□□ -0.58
SPIDR-210	ENST00000519362	GIMD1	P0DJR0	217 aa		11.4	□□□□□ -0.58
SPIDR-210	ENST00000519362	RPS19	P39019	145 aa	Known RBP	11.4	□□□□□ -0.58
SPIDR-210	ENST00000519362	ETV6	P41212	452 aa		11.4	□□□□□ -0.58
SPIDR-210	ENST00000519362	EML5	Q05BV3	1969 aa		11.4	□□□□□ -0.58
SPIDR-210	ENST00000519362	DSG2	Q14126	1118 aa		11.4	□□□□□ -0.58
SPIDR-210	ENST00000519362	ALG10B	Q5I7T1	473 aa		11.4	□□□□□ -0.58
SPIDR-210	ENST00000519362	SMARCD3	Q6STE5	483 aa		11.4	□□□□□ -0.58
SPIDR-210	ENST00000519362	CXXC5	Q7LFL8	322 aa	Known RBP	11.4	□□□□□ -0.58
SPIDR-210	ENST00000519362	GID4	Q8IVV7	300 aa		11.4	□□□□□ -0.58
SPIDR-210	ENST00000519362	OR7G1	Q8NGA0	311 aa		11.4	□□□□□ -0.58
SPIDR-210	ENST00000519362	OR13C2	Q8NGS9	318 aa		11.4	□□□□□ -0.58
SPIDR-210	ENST00000519362	OR4C3	Q8NH37	302 aa		11.4	□□□□□ -0.58
SPIDR-210	ENST00000519362	PPP1R14B	Q96C90	147 aa		11.4	□□□□□ -0.58
SPIDR-210	ENST00000519362	MVB12A	Q96EY5	273 aa		11.4	□□□□□ -0.58
SPIDR-210	ENST00000519362	AHCYL2	Q96HN2	611 aa	Known RBP	11.4	□□□□□ -0.58
SPIDR-210	ENST00000519362	EXOSC4	Q9NPD3	245 aa	Known RBP	11.4	□□□□□ -0.58
SPIDR-210	ENST00000519362	GMEB2	Q9UKD1	530 aa		11.4	□□□□□ -0.58
SPIDR-210	ENST00000519362	SSR3	Q9UNL2	185 aa		11.4	□□□□□ -0.58
SPIDR-210	ENST00000519362	MMACHC	Q9Y4U1	282 aa		11.4	□□□□□ -0.58
SPIDR-210	ENST00000519362	MAU2	Q9Y6X3	613 aa		11.4	□□□□□ -0.58
SPIDR-210	ENST00000519362	SPTB	P11277	2137 aa		11.4	□□□□□ -0.58
SPIDR-210	ENST00000519362	ABCA7	Q8IZY2	2146 aa		11.4	□□□□□ -0.58
SPIDR-210	ENST00000519362	FAM183A	A6NL82	134 aa		11.39	□□□□□ -0.59
SPIDR-210	ENST00000519362	C17orf105	B2RV13	164 aa		11.39	□□□□□ -0.59
SPIDR-210	ENST00000519362	NGFR	P08138	427 aa		11.39	□□□□□ -0.59
SPIDR-210	ENST00000519362	SAG	P10523	405 aa	Predicted RBP	11.39	□□□□□ -0.59
SPIDR-210	ENST00000519362	GLB1	P16278	677 aa		11.39	□□□□□ -0.59
SPIDR-210	ENST00000519362	S100A5	P33763	92 aa		11.39	□□□□□ -0.59
SPIDR-210	ENST00000519362	CD79B	P40259	229 aa		11.39	□□□□□ -0.59
SPIDR-210	ENST00000519362	FOXK2	Q01167	660 aa		11.39	□□□□□ -0.59
SPIDR-210	ENST00000519362	ZNF45	Q02386	682 aa		11.39	□□□□□ -0.59
SPIDR-210	ENST00000519362	FHL1	Q13642	323 aa		11.39	□□□□□ -0.59
SPIDR-210	ENST00000519362	NNAT	Q16517	81 aa		11.39	□□□□□ -0.59
SPIDR-210	ENST00000519362	PLK5	Q496M5	336 aa		11.39	□□□□□ -0.59
SPIDR-210	ENST00000519362	PERM1	Q5SV97	790 aa		11.39	□□□□□ -0.59
SPIDR-210	ENST00000519362	NIPAL3	Q6P499	406 aa		11.39	□□□□□ -0.59
SPIDR-210	ENST00000519362	PLBD1	Q6P4A8	553 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms